Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10020598m.g Eutrema salsugineum HOM05D007060 ORTHO05D009087 6.3e-293 1010.0 491 100.0
Sp3g08940 Schrenkiella parvula HOM05D007060 ORTHO05D009087 3.4e-270 934.5 491 92.1
AL3G22100 Arabidopsis lyrata HOM05D007060 ORTHO05D009087 2.3e-263 911.8 489 90.2
Carub.0003s0986 Capsella rubella HOM05D007060 ORTHO05D009087 1.4e-260 902.5 490 89.0
AT3G10630 Arabidopsis thaliana HOM05D007060 ORTHO05D009087 2.0e-259 898.7 489 88.8
CARHR085210 Cardamine hirsuta HOM05D007060 ORTHO05D009087 7.8e-251 870.2 490 86.5
BolC1t05373H Brassica oleracea HOM05D007060 ORTHO05D009087 4.7e-240 834.3 492 82.5
A01p41570 Brassica napus HOM05D007060 ORTHO05D009087 9.2e-236 820.1 493 81.9
BraA01t04232Z Brassica rapa HOM05D007060 ORTHO05D009087 4.6e-235 817.8 493 81.7
THA.LOC104816472 Tarenaya hassleriana HOM05D007060 ORTHO05D009087 5.8e-222 774.2 494 75.7
BcaB04g21186 Brassica carinata HOM05D007060 ORTHO05D009087 3.1e-207 725.3 492 75.4
Potri.008G018200 Populus trichocarpa HOM05D007060 ORTHO05D009087 2.7e-187 659.1 475 66.7
CiPaw.13G043400 Carya illinoinensis HOM05D007060 ORTHO05D009087 1.4e-186 656.8 470 66.6
TAR623G0941 Trochodendron aralioides HOM05D007060 ORTHO05D009087 6.7e-186 654.4 480 65.8
CSS0040194 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 8.2e-184 647.5 492 65.2
CSS0031015 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.4e-183 646.0 492 65.0
CSS0035234 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.4e-183 646.0 485 65.8
CSS0035496 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.4e-183 646.0 492 65.0
CSS0037157 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.4e-183 646.0 492 65.2
Cfa010526 Carpinus fangiana HOM05D007060 ORTHO05D009087 2.4e-183 646.0 486 64.8
CSS0002387 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 3.1e-183 645.6 492 65.2
CSS0040116 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 3.1e-183 645.6 492 65.0
CSS0046160 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 3.1e-183 645.6 492 65.2
CSS0037937 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 5.3e-183 644.8 485 65.8
Prupe.4G266300 Prunus persica HOM05D007060 ORTHO05D009087 1.5e-182 643.3 479 65.1
Manes.07G085000 Manihot esculenta HOM05D007060 ORTHO05D009087 2.6e-182 642.5 491 64.2
CSS0014623 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 4.5e-182 641.7 485 65.2
CSS0019796 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 4.5e-182 641.7 492 64.8
CSS0005765 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 5.9e-182 641.3 485 65.4
CSS0028923 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 7.7e-182 641.0 492 64.6
TWI63G0697 Tripterygium wilfordii HOM05D007060 ORTHO05D009087 2.2e-181 639.4 417 71.5
CANSAT56G2168 Cannabis sativa HOM05D007060 ORTHO05D009087 6.5e-181 637.9 482 62.9
Cc02_g09400 Coffea canephora HOM05D007060 ORTHO05D009087 3.9e-178 628.6 476 64.5
Duzib106G1772 Durio zibethinus HOM05D007060 ORTHO05D009087 6.7e-178 627.9 480 63.8
Nn6g34700 Nelumbo nucifera HOM05D007060 ORTHO05D009087 1.5e-177 626.7 484 62.2
Thecc.10G116400 Theobroma cacao HOM05D007060 ORTHO05D009087 7.4e-177 624.4 476 63.2
Gorai.N007800 Gossypium raimondii HOM05D007060 ORTHO05D009087 9.7e-177 624.0 472 64.8
RcHm_v2.0_Chr1g0331951 Rosa chinensis HOM05D007060 ORTHO05D009087 1.7e-176 623.2 484 62.8
Psat6g172000 Pisum sativum HOM05D007060 ORTHO05D009087 8.2e-176 620.9 482 62.2
TPR.G37861 Trifolium pratense HOM05D007060 ORTHO05D009087 7.0e-175 617.8 471 63.1
MD03G1165900 Malus domestica HOM05D007060 ORTHO05D009087 1.2e-174 617.1 483 62.9
Medtr1g090540 Medicago truncatula HOM05D007060 ORTHO05D009087 1.2e-174 617.1 481 61.3
Glyma.10G195800 Glycine max HOM05D007060 ORTHO05D009087 2.0e-174 616.3 472 64.2
Oeu033276.1 Olea europaea HOM05D007060 ORTHO05D009087 5.9e-174 614.8 411 69.3
Atru.chr12.1066 Acer truncatum HOM05D007060 ORTHO05D009087 1.3e-173 613.6 400 70.5
Lj5g0018387 Lotus japonicus HOM05D007060 ORTHO05D009087 1.3e-173 613.6 471 62.8
Sabra08G0011800 Salix brachista HOM05D007060 ORTHO05D009087 3.2e-172 609.0 401 69.6
PGR142G1122 Punica granatum HOM05D007060 ORTHO05D009087 9.4e-172 607.4 481 60.3
ClCG05G021920 Citrullus lanatus HOM05D007060 ORTHO05D009087 1.2e-171 607.1 473 63.0
PGSC0003DMG400001998 Solanum tuberosum HOM05D007060 ORTHO05D009087 1.4e-170 603.6 479 61.4
CsaV3_5G035220 Cucumis sativus L. HOM05D007060 ORTHO05D009087 3.9e-170 602.1 475 63.4
QL04p047886 Quercus lobata HOM05D007060 ORTHO05D009087 5.2e-170 601.7 398 70.4
Ciclev10015484m.g Citrus clementina HOM05D007060 ORTHO05D009087 6.7e-170 601.3 401 70.1
MELO3C012336.2 Cucumis melo HOM05D007060 ORTHO05D009087 1.1e-169 600.5 494 60.7
Sopen11g002500 Solanum pennellii HOM05D007060 ORTHO05D009087 1.1e-169 600.5 401 69.8
Solyc11g006560.3 Solanum lycopersicum HOM05D007060 ORTHO05D009087 1.5e-169 600.1 467 63.2
Nitab4.5_0001781g0140 Nicotiana tabacum HOM05D007060 ORTHO05D009087 3.3e-169 599.0 399 70.4
Ca_10429_v3 Cicer arietinum L. HOM05D007060 ORTHO05D009087 4.4e-169 598.6 387 71.3
Cpa.g.sc54.25 Carica papaya HOM05D007060 ORTHO05D009087 1.3e-168 597.0 397 69.3
CAN.G143.24 Capsicum annuum HOM05D007060 ORTHO05D009087 1.7e-168 596.7 399 70.2
Aqoxy1G00669 Aquilegia oxysepala HOM05D007060 ORTHO05D009087 3.7e-168 595.5 474 61.8
GSVIVG01034635001 Vitis vinifera HOM05D007060 ORTHO05D009087 1.1e-167 594.0 398 69.1
MSTRG.9036 Avicennia marina HOM05D007060 ORTHO05D009087 1.4e-167 593.6 474 62.0
Lj3P923T49 Lonicera japonica HOM05D007060 ORTHO05D009087 1.4e-167 593.6 397 69.8
Sed0007060 Sechium edule HOM05D007060 ORTHO05D009087 5.3e-167 591.7 406 68.5
Peaxi162Scf00725g00056 Petunia axillaris HOM05D007060 ORTHO05D010136 7.0e-167 591.3 395 70.4
HanXRQChr02g0053541 Helianthus annuus HOM05D007060 ORTHO05D009087 2.0e-166 589.7 468 62.6
Hma1.2p1_0457F.1_g156870 Hydrangea macrophylla HOM05D007060 ORTHO05D009087 1.7e-165 586.6 397 68.8
Nitab4.5_0007799g0060 Nicotiana tabacum HOM05D007060 ORTHO05D009087 1.1e-164 583.9 397 68.8
VMungo0720G1293 Vigna mungo HOM05D007060 ORTHO05D009087 7.2e-164 581.3 481 59.0
Migut.F00850 Erythranthe guttata HOM05D007060 ORTHO05D009087 1.6e-163 580.1 484 58.1
Dinv08415 Davidia involucrata HOM05D007060 ORTHO05D009087 3.0e-162 575.9 357 74.5
Phvul.007G138500 Phaseolus vulgaris HOM05D007060 ORTHO05D009087 1.2e-161 573.9 394 67.3
PGR142G0278 Punica granatum HOM05D007060 ORTHO05D009087 5.7e-161 571.6 481 58.4
COL.COLO4_07825 Corchorus olitorius HOM05D007060 ORTHO05D009087 2.2e-160 569.7 401 67.3
Lsat_1_v5_gn_2_105821 Lactuca sativa HOM05D007060 ORTHO05D009087 2.7e-158 562.8 400 67.0
unitig_46.g18644 Utricularia gibba HOM05D007060 ORTHO05D009087 2.2e-157 559.7 402 64.4
Gohir.D06G177400 Gossypium hirsutum HOM05D007060 ORTHO05D009087 5.0e-157 558.5 372 69.6
CDE06G1445 Ceratophyllum demersum HOM05D007060 ORTHO05D009087 9.4e-156 554.3 396 65.7
Sopen11g002460 Solanum pennellii HOM05D007060 ORTHO05D009087 1.6e-155 553.5 365 69.9
Rhsim03G0096200 Rhododendron simsii HOM05D007060 ORTHO05D009087 1.5e-153 547.0 399 66.2
Eucgr.G02680 Eucalyptus grandis HOM05D007060 ORTHO05D009087 7.5e-153 544.7 347 72.3
Sopen11g002480 Solanum pennellii HOM05D007060 ORTHO05D009087 7.5e-153 544.7 360 69.4
DCAR_005120 Daucus carota HOM05D007060 ORTHO05D009087 4.8e-152 542.0 366 68.0
ECA238G3502 Erigeron canadensis HOM05D007060 ORTHO05D009087 8.3e-152 541.2 398 63.8
Os09g0296700 Oryza sativa ssp. japonica HOM05D007060 ORTHO05D009087 1.4e-151 540.4 424 61.1
SalBow1G5690 Salvia bowleyana HOM05D007060 ORTHO05D009087 1.8e-151 540.0 468 58.3
Actinidia03837 Actinidia chinensis HOM05D007060 ORTHO05D009087 3.1e-151 539.3 345 73.3
SEGI_33772 Sequoiadendron giganteum HOM05D007060 ORTHO05D009087 2.8e-147 526.2 473 57.3
Zm00001eb309100 Zea mays HOM05D007060 ORTHO05D009087 1.4e-146 523.9 408 60.8
ATR0772G206 Amborella trichopoda HOM05D007060 ORTHO05D009087 3.4e-145 519.2 481 54.1
SMO203G0203 Selaginella moellendorffii HOM05D007060 ORTHO05D009087 6.2e-131 471.9 399 57.9
AagrBONN_evm.TU.Sc2ySwM_344.3615 Anthoceros agrestis HOM05D007060 ORTHO05D009087 1.7e-125 453.8 395 56.2
SHI22512 Sapria himalayana HOM05D007060 ORTHO05D009087 2.7e-118 429.9 350 60.6
Lalb_Chr21g0312821 Lupinus albus HOM05D007060 ORTHO05D009087 4.6e-118 429.1 290 71.4
Glyma.20G194300 Glycine max HOM05D007060 ORTHO05D009087 2.5e-108 396.7 324 60.5
Pp3c6_17860 Physcomitrium patens HOM05D007060 ORTHO05D009087 2.4e-106 390.2 405 48.4
CBR_g29369 Chara braunii HOM05D007060 ORTHO05D009087 7.9e-94 348.6 295 57.3
MCO11G427 Micromonas commoda HOM05D007060 ORTHO05D009087 7.9e-86 322.0 429 42.2
Cre02.g118801 Chlamydomonas reinhardtii HOM05D007060 ORTHO05D009087 7.4e-84 315.5 433 40.4
Hma1.2p1_0826F.1_g224930 Hydrangea macrophylla HOM05D007060 ORTHO05D009087 2.8e-83 313.5 211 69.7
PRCOL_00001658 Prasinoderma coloniale HOM05D007060 ORTHO05D009087 4.1e-74 283.1 449 39.6
FvH4_5g28400 Fragaria vesca HOM05D007060 ORTHO05D009087 5.0e-64 249.6 158 72.2
TAR625G0310 Trochodendron aralioides HOM05D007060 ORTHO05D009087 8.5e-64 248.8 300 44.7
FAN24G3568 Fragaria x ananassa HOM05D007060 ORTHO05D009087 7.4e-60 235.7 396 36.9
Cre09.g386732 Chlamydomonas reinhardtii HOM05D007060 ORTHO05D009087 1.3e-40 171.8 320 32.2
HPP92_006362 Vanilla planifolia HOM05D007060 ORTHO05D009087 5.0e-40 169.9 118 61.9
PRCOL_00006151 Prasinoderma coloniale HOM05D007060 ORTHO05D048979 1.2e-30 138.7 296 32.1
FAN03G2415 Fragaria x ananassa HOM05D007060 ORTHO05D009087 1.7e-27 128.3 89 69.7
MCO05G161 Micromonas commoda HOM05D007060 ORTHO05D048979 5.6e-23 113.2 294 29.9
AL1G24060 Arabidopsis lyrata HOM05D007060 ORTHO05D023607 5.2e-21 106.7 59 84.7
MBI01_g04536_MAGBIO Magnolia biondii HOM05D007060 ORTHO05D009087 8.3e-19 99.4 72 63.9
CBR_g29367 Chara braunii HOM05D007060 ORTHO05D009087 4.6e-09 67.0 79 44.3


User provided reference genes

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