Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10019564m.g Eutrema salsugineum HOM05D007408 ORTHO05D009325 5.4e-40 167.2 82 100.0
Sp5g23800 Schrenkiella parvula HOM05D007408 ORTHO05D009325 7.3e-29 130.2 80 78.8
Carub.0002s1524 Capsella rubella HOM05D007408 ORTHO05D009325 1.3e-22 109.4 73 74.0
AT1G68700 Arabidopsis thaliana HOM05D007408 ORTHO05D009325 5.1e-22 107.5 75 78.7
BcaB03g15446 Brassica carinata HOM05D007408 ORTHO05D009325 6.7e-22 107.1 61 80.3
BcaC08g46321 Brassica carinata HOM05D000085 ORTHO05D000274 2.1e-20 102.1 61 78.7
C06p41170 Brassica napus HOM05D000085 ORTHO05D000274 2.1e-20 102.1 61 78.7
BolC6t39308H Brassica oleracea HOM05D000085 ORTHO05D000274 2.1e-20 102.1 61 78.7
A07p35100 Brassica napus HOM05D000085 ORTHO05D000274 2.4e-19 98.6 61 75.4
BraA07t31103Z Brassica rapa HOM05D000085 ORTHO05D000274 2.4e-19 98.6 61 75.4
CARHR061510 Cardamine hirsuta HOM05D007408 ORTHO05D009325 3.4e-18 94.7 57 78.9
BcaC08g45945 Brassica carinata HOM05D000085 ORTHO05D000274 7.6e-18 93.6 63 76.2
C06p37420 Brassica napus HOM05D007408 ORTHO05D009325 7.6e-18 93.6 63 76.2
BolC6t38845H Brassica oleracea HOM05D000085 ORTHO05D000274 7.6e-18 93.6 63 76.2
BcaB03g15828 Brassica carinata HOM05D007408 ORTHO05D009325 1.0e-17 93.2 54 81.5
A07p31850 Brassica napus HOM05D007408 ORTHO05D009325 2.7e-15 85.1 50 82.0
BraA07t30814Z Brassica rapa HOM05D007408 ORTHO05D009325 4.6e-15 84.3 50 82.0
BcaC08g45936 Brassica carinata HOM05D000085 ORTHO05D000274 6.0e-15 84.0 80 60.0
C03p72700 Brassica napus HOM05D007408 ORTHO05D009325 2.7e-07 58.5 53 56.6
BolC3t19568H Brassica oleracea HOM05D007408 ORTHO05D009325 2.7e-07 58.5 53 56.6
AL1G39610 Arabidopsis lyrata HOM05D007408 ORTHO05D009325 3.5e-07 58.2 54 55.6
A08p27160 Brassica napus HOM05D007408 ORTHO05D009325 4.6e-07 57.8 53 56.6
CARHR025780 Cardamine hirsuta HOM05D007408 ORTHO05D009325 6.1e-07 57.4 46 63.0
THA.LOC104822179 Tarenaya hassleriana HOM05D007408 ORTHO05D009325 1.3e-06 56.2 59 50.8
BraA08t34661Z Brassica rapa HOM05D007408 ORTHO05D009325 2.3e-06 55.5 53 52.8
AT1G26140 Arabidopsis thaliana HOM05D007408 ORTHO05D009325 3.0e-06 55.1 54 53.7
Thhalv10009687m.g Eutrema salsugineum HOM05D007408 ORTHO05D009325 3.0e-06 55.1 53 54.7
Sp1g22520 Schrenkiella parvula HOM05D007408 ORTHO05D009325 3.9e-06 54.7 34 73.5


User provided reference genes

Program Settings