Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10018699m.g Eutrema salsugineum HOM05D003670 ORTHO05D004767 1.6e-222 775.8 385 100.0
Sp5g34280 Schrenkiella parvula HOM05D003670 ORTHO05D004767 5.6e-204 714.1 385 91.7
Carub.0002s2610 Capsella rubella HOM05D003670 ORTHO05D004767 4.9e-200 701.0 385 89.4
AL2G39700 Arabidopsis lyrata HOM05D003670 ORTHO05D004767 6.6e-197 690.6 385 88.1
AT1G79230 Arabidopsis thaliana HOM05D003670 ORTHO05D004767 1.9e-196 689.1 385 88.3
BcaB02g07206 Brassica carinata HOM05D003670 ORTHO05D004767 3.6e-195 684.9 387 88.1
BcaC08g45368 Brassica carinata HOM05D003670 ORTHO05D004767 1.4e-194 682.9 387 87.9
C06p30000 Brassica napus HOM05D003670 ORTHO05D004767 1.4e-194 682.9 387 87.9
A07p27230 Brassica napus HOM05D003670 ORTHO05D004767 5.2e-194 681.0 387 87.3
BraA07t30367Z Brassica rapa HOM05D003670 ORTHO05D004767 5.2e-194 681.0 387 87.3
Aa31LG4G1790 Aethionema arabicum HOM05D003670 ORTHO05D004767 6.8e-194 680.6 370 89.2
BolC6t38160H Brassica oleracea HOM05D003670 ORTHO05D004767 6.8e-194 680.6 387 87.6
A07p44350 Brassica napus HOM05D003670 ORTHO05D004767 2.6e-193 678.7 385 87.3
BraA07t31943Z Brassica rapa HOM05D003670 ORTHO05D004767 3.4e-193 678.3 385 87.3
CARHR016930 Cardamine hirsuta HOM05D003670 ORTHO05D004767 5.8e-185 651.0 383 82.8
THA.LOC104812362 Tarenaya hassleriana HOM05D003670 ORTHO05D004767 1.1e-180 636.7 378 81.2
Carub.0001s1620 Capsella rubella HOM05D003670 ORTHO05D004767 2.4e-178 629.0 382 79.1
CARHR072860 Cardamine hirsuta HOM05D003670 ORTHO05D004767 2.4e-175 619.0 323 92.0
BolC5t30186H Brassica oleracea HOM05D003670 ORTHO05D004767 4.6e-174 614.8 382 77.7
BcaC05g25571 Brassica carinata HOM05D003670 ORTHO05D004767 1.8e-173 612.8 382 77.5
C05p14650 Brassica napus HOM05D003670 ORTHO05D004767 3.9e-173 611.7 382 77.5
BcaB05g25180 Brassica carinata HOM05D003670 ORTHO05D004767 2.4e-170 602.4 320 91.2
BraA06t24401Z Brassica rapa HOM05D003670 ORTHO05D004767 1.2e-169 600.1 383 76.5
THA.LOC104813608 Tarenaya hassleriana HOM05D003670 ORTHO05D004767 1.5e-169 599.7 386 77.7
A06p12380 Brassica napus HOM05D003670 ORTHO05D004767 2.0e-169 599.4 383 75.5
Thhalv10007910m.g Eutrema salsugineum HOM05D003670 ORTHO05D004767 6.5e-168 594.3 320 87.8
BcaB02g06624 Brassica carinata HOM05D003670 ORTHO05D004767 7.1e-167 590.9 381 75.1
Gohir.D13G127300 Gossypium hirsutum HOM05D003670 ORTHO05D004767 1.5e-164 583.2 378 74.9
Gohir.A13G123400 Gossypium hirsutum HOM05D003670 ORTHO05D004767 3.3e-164 582.0 378 74.6
BcaC08g47490 Brassica carinata HOM05D003670 ORTHO05D004767 4.3e-164 581.6 388 78.4
Manes.06G175700 Manihot esculenta HOM05D003670 ORTHO05D004767 3.7e-163 578.6 377 74.3
Gorai.013G142500 Gossypium raimondii HOM05D003670 ORTHO05D004767 1.4e-162 576.6 379 74.4
CSS0006756 Camellia sinensis var. sinensis HOM05D003670 ORTHO05D004767 5.3e-162 574.7 382 73.3
QL04p088520 Quercus lobata HOM05D003670 ORTHO05D004767 6.9e-162 574.3 403 71.5
Hma1.2p1_0151F.1_g067325 Hydrangea macrophylla HOM05D003670 ORTHO05D004767 5.9e-161 571.2 374 75.1
Manes.14G010300 Manihot esculenta HOM05D003670 ORTHO05D004767 5.9e-161 571.2 377 74.0
Potri.007G069300 Populus trichocarpa HOM05D003670 ORTHO05D004767 2.9e-160 568.9 379 73.1
PGR031G1669 Punica granatum HOM05D003670 ORTHO05D004767 1.1e-159 567.0 380 73.4
Nitab4.5_0000029g0340 Nicotiana tabacum HOM05D003670 ORTHO05D004767 2.5e-159 565.8 381 73.8
Peaxi162Scf00452g00333 Petunia axillaris HOM05D003670 ORTHO05D004767 9.3e-159 563.9 377 73.5
TWI39G0091 Tripterygium wilfordii HOM05D003670 ORTHO05D004767 1.2e-158 563.5 378 73.3
GSVIVG01036786001 Vitis vinifera HOM05D003670 ORTHO05D004767 1.2e-158 563.5 385 72.2
Aa31LG7G1000 Aethionema arabicum HOM05D003670 ORTHO05D004767 1.6e-158 563.1 322 82.6
COL.COLO4_32264 Corchorus olitorius HOM05D003670 ORTHO05D004767 1.6e-158 563.1 345 78.0
MD05G1228000 Malus domestica HOM05D003670 ORTHO05D004767 1.6e-158 563.1 385 72.7
Prupe.4G134300 Prunus persica HOM05D003670 ORTHO05D004767 1.6e-158 563.1 378 73.3
Nitab4.5_0006241g0010 Nicotiana tabacum HOM05D003670 ORTHO05D004767 3.6e-158 562.0 382 72.5
Lsat_1_v5_gn_7_110680 Lactuca sativa HOM05D003670 ORTHO05D004767 6.1e-158 561.2 377 73.2
Ciclev10005196m.g Citrus clementina HOM05D003670 ORTHO05D004767 1.3e-157 560.1 379 73.6
PGSC0003DMG400022232 Solanum tuberosum HOM05D003670 ORTHO05D004767 1.8e-157 559.7 363 75.8
Cc05_g16310 Coffea canephora HOM05D003670 ORTHO05D004767 3.0e-157 558.9 377 72.7
HanXRQChr11g0335601 Helianthus annuus HOM05D003670 ORTHO05D004767 3.9e-157 558.5 383 72.6
TWI38G1711 Tripterygium wilfordii HOM05D003670 ORTHO05D004767 1.1e-156 557.0 379 73.6
CiPaw.11G061900 Carya illinoinensis HOM05D003670 ORTHO05D004767 1.5e-156 556.6 381 72.7
Lj3g0014239 Lotus japonicus HOM05D003670 ORTHO05D004767 1.5e-156 556.6 386 72.8
Glyma.08G167100 Glycine max HOM05D003670 ORTHO05D004767 3.3e-156 555.4 379 74.7
Peaxi162Scf00006g00159 Petunia axillaris HOM05D003670 ORTHO05D004767 5.7e-156 554.7 382 71.5
Phvul.005G050400 Phaseolus vulgaris HOM05D003670 ORTHO05D004767 1.3e-155 553.5 382 73.0
Rhsim06G0242300 Rhododendron simsii HOM05D003670 ORTHO05D004767 1.3e-155 553.5 339 78.2
Thecc.07G180400 Theobroma cacao HOM05D003670 ORTHO05D004767 1.3e-155 553.5 380 71.8
MD10G1208500 Malus domestica HOM05D003670 ORTHO05D004767 1.6e-155 553.1 383 72.8
Sp1g14610 Schrenkiella parvula HOM05D003670 ORTHO05D004767 1.6e-155 553.1 322 80.7
TAR583G0001 Trochodendron aralioides HOM05D003670 ORTHO05D004767 2.2e-155 552.7 376 72.6
TPR.G33813 Trifolium pratense HOM05D003670 ORTHO05D004767 2.8e-155 552.4 378 71.4
Duzib187G0441 Durio zibethinus HOM05D003670 ORTHO05D004767 3.7e-155 552.0 316 80.4
ECA236G3562 Erigeron canadensis HOM05D003670 ORTHO05D004767 3.7e-155 552.0 323 81.1
Ca_03600_v3 Cicer arietinum L. HOM05D003670 ORTHO05D004767 4.8e-155 551.6 352 75.6
Sopen07g034740 Solanum pennellii HOM05D003670 ORTHO05D004767 6.3e-155 551.2 382 73.0
RcHm_v2.0_Chr5g0024611 Rosa chinensis HOM05D003670 ORTHO05D004767 8.2e-155 550.8 383 72.1
Solyc07g066580.3 Solanum lycopersicum HOM05D003670 ORTHO05D004767 8.2e-155 550.8 382 72.8
CAN.G943.51 Capsicum annuum HOM05D003670 ORTHO05D004767 1.1e-154 550.4 385 71.9
AL1G28600 Arabidopsis lyrata HOM05D003670 ORTHO05D004767 3.1e-154 548.9 320 82.2
FvH4_3g14990 Fragaria vesca HOM05D003670 ORTHO05D004767 3.1e-154 548.9 383 71.0
Nitab4.5_0005765g0040 Nicotiana tabacum HOM05D003670 ORTHO05D004767 3.1e-154 548.9 382 71.2
FAN11G2825 Fragaria x ananassa HOM05D003670 ORTHO05D004767 5.3e-154 548.1 383 71.0
Medtr2g067080 Medicago truncatula HOM05D003670 ORTHO05D004767 9.1e-154 547.4 380 71.8
Nn7g37780 Nelumbo nucifera HOM05D003670 ORTHO05D004767 9.1e-154 547.4 341 78.3
Lalb_Chr25g0284691 Lupinus albus HOM05D003670 ORTHO05D004767 1.2e-153 547.0 384 72.4
Migut.H01671 Erythranthe guttata HOM05D003670 ORTHO05D004767 1.5e-153 546.6 378 70.4
VMungo1080G1660 Vigna mungo HOM05D003670 ORTHO05D004767 1.5e-153 546.6 372 73.9
Psat1g013760 Pisum sativum HOM05D003670 ORTHO05D004767 2.0e-153 546.2 378 72.8
PSO541G1524 Papaver somniferum HOM05D003670 ORTHO05D004767 4.5e-153 545.0 386 69.7
CsaV3_3G018980 Cucumis sativus L. HOM05D003670 ORTHO05D004767 5.9e-153 544.7 380 71.3
FAN21G1395 Fragaria x ananassa HOM05D003670 ORTHO05D004767 5.9e-153 544.7 385 70.4
PSO675G6901 Papaver somniferum HOM05D003670 ORTHO05D004767 5.9e-153 544.7 386 69.9
Potri.005G095300 Populus trichocarpa HOM05D003670 ORTHO05D004767 5.9e-153 544.7 308 83.4
Eucgr.F04458 Eucalyptus grandis HOM05D003670 ORTHO05D004767 1.0e-152 543.9 377 71.6
Solyc02g078990.4 Solanum lycopersicum HOM05D003670 ORTHO05D004767 1.0e-152 543.9 361 73.1
Ah.10g033690 Amaranthus hybridus HOM05D003670 ORTHO05D004767 2.2e-152 542.7 404 68.3
AT1G16460 Arabidopsis thaliana HOM05D003670 ORTHO05D004767 2.9e-152 542.3 320 81.6
MBI02_g18168_MAGBIO Magnolia biondii HOM05D003670 ORTHO05D004767 2.9e-152 542.3 377 71.4
FAN25G1710 Fragaria x ananassa HOM05D003670 ORTHO05D004767 8.5e-152 540.8 397 68.5
Sopen02g023800 Solanum pennellii HOM05D003670 ORTHO05D004767 8.5e-152 540.8 315 81.0
Sabra07G0056700 Salix brachista HOM05D003670 ORTHO05D004767 3.2e-151 538.9 398 68.8
CANSAT80G2697 Cannabis sativa HOM05D003670 ORTHO05D004767 5.5e-151 538.1 385 71.2
unitig_578.g16333 Utricularia gibba HOM05D003670 ORTHO05D004767 9.4e-151 537.3 338 73.4
Sabra05G0078800 Salix brachista HOM05D003670 ORTHO05D004767 1.6e-150 536.6 339 75.8
BolC6t40330H Brassica oleracea HOM05D003670 ORTHO05D004767 1.0e-149 533.9 339 79.9
EL10Ac2g03264 Beta vulgaris HOM05D003670 ORTHO05D004767 3.0e-149 532.3 392 67.9
Oeu002796.1 Olea europaea HOM05D003670 ORTHO05D004767 3.0e-149 532.3 320 75.9
MSTRG.14566 Avicennia marina HOM05D003670 ORTHO05D004767 3.9e-149 531.9 382 68.8
AUR62039184 Chenopodium quinoa HOM05D003670 ORTHO05D004767 8.8e-149 530.8 381 69.3
Sed0012107 Sechium edule HOM05D003670 ORTHO05D004767 8.8e-149 530.8 378 69.8
AUR62037644 Chenopodium quinoa HOM05D003670 ORTHO05D004767 1.1e-148 530.4 381 69.3
ATR0763G120 Amborella trichopoda HOM05D003670 ORTHO05D004767 3.3e-148 528.9 380 69.2
C06p53140 Brassica napus HOM05D003670 ORTHO05D004767 2.8e-147 525.8 341 79.2
Aqoxy1G01484 Aquilegia oxysepala HOM05D003670 ORTHO05D004767 1.1e-146 523.9 377 67.4
vmacro11699 Vaccinium macrocarpon HOM05D003670 ORTHO05D004767 1.5e-145 520.0 410 64.9
Os12g0608600 Oryza sativa ssp. japonica HOM05D003670 ORTHO05D004767 5.0e-144 515.0 303 78.5
Zm00001eb031400 Zea mays HOM05D003670 ORTHO05D004767 1.4e-143 513.5 326 74.2
Glyma.15G260300 Glycine max HOM05D003670 ORTHO05D004767 3.2e-143 512.3 353 74.5
Oeu043724.2 Olea europaea HOM05D003670 ORTHO05D004767 1.2e-142 510.4 323 74.3
Cfa022976 Carpinus fangiana HOM05D003670 ORTHO05D004767 2.7e-142 509.2 346 71.4
SGA_v2.0_scaffold186G40197 Striga asiatica HOM05D003670 ORTHO05D004767 6.3e-139 498.0 300 75.0
HPP92_013192 Vanilla planifolia HOM05D003670 ORTHO05D004767 1.1e-138 497.3 380 64.2
Duzib213G1009 Durio zibethinus HOM05D003670 ORTHO05D004767 9.1e-138 494.2 384 65.9
arahy.Tifrunner.gnm1.ann1.36F1KB Arachis hypogaea HOM05D003670 ORTHO05D004767 1.2e-137 493.8 354 72.9
ClCG05G009800 Citrullus lanatus HOM05D003670 ORTHO05D000003 4.5e-137 491.9 377 66.3
DCAR_019919 Daucus carota HOM05D003670 ORTHO05D004767 7.7e-137 491.1 377 66.3
MSTRG.7076 Avicennia marina HOM05D003670 ORTHO05D004767 2.2e-136 489.6 346 66.2
Hund20101 Selenicereus undatus HOM05D003670 ORTHO05D004767 2.2e-136 489.6 378 66.9
Sc06g0002800 Simmondsia chinensis HOM05D003670 ORTHO05D004767 2.9e-136 489.2 350 69.7
arahy.Tifrunner.gnm1.ann1.YZ7E83 Arachis hypogaea HOM05D003670 ORTHO05D004767 1.2e-132 477.2 354 71.8
unitig_8.g4750 Utricularia gibba HOM05D003670 ORTHO05D004767 2.0e-132 476.5 378 63.2
Nitab4.5_0000388g0140 Nicotiana tabacum HOM05D003670 ORTHO05D004767 7.0e-130 468.0 327 72.5
DCAR_016837 Daucus carota HOM05D003670 ORTHO05D004767 2.5e-127 459.5 294 71.8
SEGI_21826 Sequoiadendron giganteum HOM05D003670 ORTHO05D004767 1.2e-126 457.2 311 68.2
MELO3C019489.2 Cucumis melo HOM05D003670 ORTHO05D004767 2.7e-126 456.1 328 70.1
Lj2A15G76 Lonicera japonica HOM05D003670 ORTHO05D004767 3.4e-124 449.1 349 66.5
Os02g0167100 Oryza sativa ssp. japonica HOM05D003670 ORTHO05D004767 5.4e-122 441.8 296 66.2
QL04p088965 Quercus lobata HOM05D003670 ORTHO05D004767 5.9e-121 438.3 241 85.5
Mapoly0058s0078 Marchantia polymorpha HOM05D003670 ORTHO05D004767 6.8e-117 424.9 315 61.9
SGA_v2.0_scaffold49G18190 Striga asiatica HOM05D003670 ORTHO05D004767 3.1e-114 416.0 287 71.1
AagrBONN_evm.TU.Sc2ySwM_344.5346 Anthoceros agrestis HOM05D003670 ORTHO05D004767 7.8e-113 411.4 330 60.3
Zm00001eb207410 Zea mays HOM05D003670 ORTHO05D004767 3.8e-112 409.1 328 59.1
Haze_07818 Corylus avellana HOM05D003670 ORTHO05D004767 1.5e-108 397.1 326 65.6
Pp3c9_17670 Physcomitrium patens HOM05D003670 ORTHO05D004767 1.2e-105 387.5 333 57.1
Dinv19592 Davidia involucrata HOM05D003670 ORTHO05D004767 3.9e-104 382.5 299 67.2
CDE06G2006 Ceratophyllum demersum HOM05D003670 ORTHO05D004767 1.6e-102 377.1 314 62.4
SMO119G0061 Selaginella moellendorffii HOM05D003670 ORTHO05D004767 6.8e-101 371.7 301 59.1
Rhsim05G0210500 Rhododendron simsii HOM05D003670 ORTHO05D004767 2.6e-100 369.8 224 80.4
HPP92_013209 Vanilla planifolia HOM05D003670 ORTHO05D004767 2.3e-96 356.7 380 50.8
A02p22680 Brassica napus HOM05D003670 ORTHO05D004767 1.9e-90 337.0 404 52.0
CDE02G0962 Ceratophyllum demersum HOM05D003670 ORTHO05D004767 2.4e-90 336.7 233 69.1
MD05G1228700 Malus domestica HOM05D003670 ORTHO05D004767 9.2e-90 334.7 201 78.1
Actinidia12766 Actinidia chinensis HOM05D003670 ORTHO05D004767 1.0e-88 331.3 237 71.3
Cpa.g.sc34.17 Carica papaya HOM05D003670 ORTHO05D004767 8.6e-88 328.2 216 74.1
FAN16G2550 Fragaria x ananassa HOM05D003670 ORTHO05D004767 1.5e-87 327.4 199 75.9
C02p36310 Brassica napus HOM05D003670 ORTHO05D004767 1.2e-76 291.2 219 70.3
RcHm_v2.0_Chr5g0024731 Rosa chinensis HOM05D003670 ORTHO05D004767 8.4e-75 285.0 222 68.5
CBR_g17038 Chara braunii HOM05D003670 ORTHO05D004767 7.3e-71 271.9 356 43.8
MCO09G588 Micromonas commoda HOM05D003670 ORTHO05D004767 5.4e-66 255.8 297 46.8
Cre13.g607050 Chlamydomonas reinhardtii HOM05D003670 ORTHO05D004767 1.5e-63 247.7 299 42.8
PRCOL_00006295 Prasinoderma coloniale HOM05D003670 ORTHO05D004767 8.1e-62 241.9 303 43.9
Hma1.2p1_0269F.1_g107810 Hydrangea macrophylla HOM05D003670 ORTHO05D004767 9.3e-50 201.8 153 67.3
Aqoxy1G03000 Aquilegia oxysepala HOM05D003670 ORTHO05D004767 1.0e-48 198.4 114 78.1
Cfa026738 Carpinus fangiana HOM05D003670 ORTHO05D004767 3.4e-44 183.3 336 37.5
MD05G1228600 Malus domestica HOM05D003670 ORTHO05D004767 5.0e-43 179.5 184 56.5
BolC1t01654H Brassica oleracea HOM05D003670 ORTHO05D004767 7.4e-39 165.6 132 67.4
C03p82980 Brassica napus HOM05D003670 ORTHO05D004767 2.8e-38 163.7 95 85.3
BcaC01g00674 Brassica carinata HOM05D003670 ORTHO05D004767 1.4e-37 161.4 92 85.9
C01p17180 Brassica napus HOM05D003670 ORTHO05D004767 2.4e-37 160.6 132 65.9
BcaC04g18607 Brassica carinata HOM05D003670 ORTHO05D004767 1.5e-36 157.9 92 83.7
BolC9t58925H Brassica oleracea HOM05D003670 ORTHO05D004767 2.0e-36 157.5 132 64.4
CAN.G891.1 Capsicum annuum HOM05D003670 ORTHO05D004767 6.5e-35 152.5 94 80.9
Oeu010650.2 Olea europaea HOM05D003670 ORTHO05D004767 3.7e-30 136.7 98 72.4
Lsat_1_v5_gn_4_93521 Lactuca sativa HOM05D003670 ORTHO05D004767 1.9e-26 124.4 66 86.4
Cpa.g.sc34.16 Carica papaya HOM05D003670 ORTHO05D004767 6.1e-25 119.4 73 72.6
BcaC06g34801 Brassica carinata HOM05D003670 ORTHO05D004767 8.0e-25 119.0 92 69.6
BolC7t42971H Brassica oleracea HOM05D003670 ORTHO05D004767 1.4e-24 118.2 134 55.2
Oeu034061.1 Olea europaea HOM05D003670 ORTHO05D020012 5.2e-24 116.3 71 73.2
Mapoly0032s0014 Marchantia polymorpha HOM05D003670 ORTHO05D031137 8.8e-24 115.5 360 26.4
Solyc06g009850.3 Solanum lycopersicum HOM05D003670 ORTHO05D014971 1.4e-21 108.2 120 50.8
BcaC03g15876 Brassica carinata HOM05D003670 ORTHO05D020012 7.0e-21 105.9 62 80.6
CDE06G0877 Ceratophyllum demersum HOM05D003670 ORTHO05D004767 6.5e-19 99.4 60 71.7
BcaC05g28269 Brassica carinata HOM05D003670 ORTHO05D014971 3.6e-17 93.6 107 51.4
AagrBONN_evm.TU.Sc2ySwM_117.2139 Anthoceros agrestis HOM05D003670 ORTHO05D031137 1.1e-13 82.0 242 28.9
QL04p088979 Quercus lobata HOM05D003670 ORTHO05D004767 1.4e-13 81.6 102 51.0
BcaC02g07679 Brassica carinata HOM05D003670 ORTHO05D014971 3.5e-12 77.0 41 85.4
C06p40160 Brassica napus HOM05D003670 ORTHO05D020012 1.3e-11 75.1 44 77.3
BolC6t39098H Brassica oleracea HOM05D003670 ORTHO05D020012 1.3e-11 75.1 44 77.3
Sopen06g004510 Solanum pennellii HOM05D003670 ORTHO05D014971 2.2e-11 74.3 47 74.5
Solyc06g009860.1 Solanum lycopersicum HOM05D003670 ORTHO05D020012 5.0e-11 73.2 74 51.4
Lsat_1_v5_gn_8_160501 Lactuca sativa HOM05D003670 ORTHO05D002209 1.5e-07 61.6 33 87.9


User provided reference genes

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