Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10018564m.g Eutrema salsugineum HOM05D003764 ORTHO05D004356 7.2e-256 886.7 442 100.0
AT1G76250 Arabidopsis thaliana HOM05D003764 ORTHO05D004356 8.1e-223 776.9 442 86.4
Sp5g31390 Schrenkiella parvula HOM05D003764 ORTHO05D004356 1.2e-221 773.1 443 86.7
BraA07t31712Z Brassica rapa HOM05D003764 ORTHO05D004356 1.7e-217 759.2 442 85.3
A07p41820 Brassica napus HOM05D003764 ORTHO05D004356 3.3e-216 755.0 442 84.4
BcaC08g47123 Brassica carinata HOM05D003764 ORTHO05D004356 3.6e-215 751.5 442 84.6
BcaC08g47274 Brassica carinata HOM05D003764 ORTHO05D004356 2.4e-214 748.8 442 83.9
C06p50220 Brassica napus HOM05D003764 ORTHO05D004356 2.4e-214 748.8 442 83.9
BolC6t40061H Brassica oleracea HOM05D003764 ORTHO05D004356 2.4e-214 748.8 442 83.9
Carub.0002s2314 Capsella rubella HOM05D003764 ORTHO05D004356 1.7e-212 742.7 443 83.3
CARHR069810 Cardamine hirsuta HOM05D003764 ORTHO05D004356 3.5e-210 734.9 442 82.6
A07p28580 Brassica napus HOM05D003764 ORTHO05D004356 1.4e-203 713.0 442 79.2
BcaC08g45536 Brassica carinata HOM05D003764 ORTHO05D004356 1.9e-203 712.6 442 79.0
C06p32120 Brassica napus HOM05D003764 ORTHO05D004356 1.9e-203 712.6 442 79.0
BolC6t38338H Brassica oleracea HOM05D003764 ORTHO05D004356 1.9e-203 712.6 442 79.0
BcaB02g07057 Brassica carinata HOM05D003764 ORTHO05D004356 4.2e-203 711.4 442 78.7
BraA07t30497Z Brassica rapa HOM05D003764 ORTHO05D004356 1.0e-201 706.8 439 79.0
Aa31LG4G6340 Aethionema arabicum HOM05D003764 ORTHO05D004356 6.4e-196 687.6 442 75.6
Haze_22757 Corylus avellana HOM05D003764 ORTHO05D004356 6.7e-161 571.2 438 64.2
Dinv31931 Davidia involucrata HOM05D003764 ORTHO05D004356 7.7e-157 557.8 445 62.2
CANSAT25G3149 Cannabis sativa HOM05D003764 ORTHO05D004356 1.1e-155 553.9 444 62.4
CANSAT80G1902 Cannabis sativa HOM05D003764 ORTHO05D004356 2.1e-154 549.7 444 61.3
Ciclev10001182m.g Citrus clementina HOM05D003764 ORTHO05D004356 4.7e-154 548.5 439 63.6
GSVIVG01008681001 Vitis vinifera HOM05D003764 ORTHO05D004356 2.6e-152 542.7 438 61.0
Actinidia15487 Actinidia chinensis HOM05D003764 ORTHO05D004356 3.3e-152 542.3 403 65.8
QL02p013934 Quercus lobata HOM05D003764 ORTHO05D004356 4.4e-152 542.0 441 61.0
Manes.05G135000 Manihot esculenta HOM05D003764 ORTHO05D004356 1.3e-151 540.4 442 60.9
Nn5g30922 Nelumbo nucifera HOM05D003764 ORTHO05D004356 4.8e-151 538.5 446 60.5
Actinidia17035 Actinidia chinensis HOM05D003764 ORTHO05D004356 9.1e-150 534.3 443 59.8
Migut.C00949 Erythranthe guttata HOM05D003764 ORTHO05D004356 9.1e-150 534.3 355 70.1
Manes.18G006000 Manihot esculenta HOM05D003764 ORTHO05D004356 9.1e-150 534.3 442 61.3
TAR628G1614 Trochodendron aralioides HOM05D003764 ORTHO05D004356 9.1e-150 534.3 351 70.7
Migut.C00953 Erythranthe guttata HOM05D003764 ORTHO05D004356 2.6e-149 532.7 356 69.7
vmacro21825 Vaccinium macrocarpon HOM05D003764 ORTHO05D004356 3.5e-149 532.3 442 59.3
Solyc12g094550.2 Solanum lycopersicum HOM05D003764 ORTHO05D004356 4.5e-149 531.9 385 65.2
PGSC0003DMG400029320 Solanum tuberosum HOM05D003764 ORTHO05D004356 1.0e-148 530.8 354 69.2
THA.LOC104813245 Tarenaya hassleriana HOM05D003764 ORTHO05D004356 1.3e-148 530.4 460 60.9
Nn6g31748 Nelumbo nucifera HOM05D003764 ORTHO05D004356 2.2e-148 529.6 448 60.3
Sopen12g031450 Solanum pennellii HOM05D003764 ORTHO05D004356 2.2e-148 529.6 354 68.6
CiPaw.07G139600 Carya illinoinensis HOM05D003764 ORTHO05D004356 2.9e-148 529.3 443 60.0
Rhsim06G0008200 Rhododendron simsii HOM05D003764 ORTHO05D004356 1.5e-147 526.9 350 69.7
Oeu035836.1 Olea europaea HOM05D003764 ORTHO05D004356 1.9e-147 526.6 440 58.4
Peaxi162Scf00064g01131 Petunia axillaris HOM05D003764 ORTHO05D004356 3.2e-147 525.8 347 70.3
PSO210G7283 Papaver somniferum HOM05D003764 ORTHO05D004356 9.4e-147 524.2 442 58.6
PGR031G0670 Punica granatum HOM05D003764 ORTHO05D004356 1.2e-146 523.9 438 60.7
Oeu021826.1 Olea europaea HOM05D003764 ORTHO05D004356 1.6e-146 523.5 436 58.7
Phvul.009G021800 Phaseolus vulgaris HOM05D003764 ORTHO05D004356 2.1e-146 523.1 359 68.0
Potri.005G249600 Populus trichocarpa HOM05D003764 ORTHO05D004356 2.7e-146 522.7 440 58.6
SGA_v2.0_scaffold108G30849 Striga asiatica HOM05D003764 ORTHO05D004356 2.7e-146 522.7 342 70.2
Nitab4.5_0000699g0100 Nicotiana tabacum HOM05D003764 ORTHO05D004356 4.7e-146 521.9 352 69.0
VMungo1309G0568 Vigna mungo HOM05D003764 ORTHO05D004356 4.7e-146 521.9 358 68.4
TWI56G0154 Tripterygium wilfordii HOM05D003764 ORTHO05D004356 8.0e-146 521.2 436 58.5
SGA_v2.0_scaffold108G30854 Striga asiatica HOM05D003764 ORTHO05D004356 1.0e-145 520.8 350 69.1
Nitab4.5_0003544g0010 Nicotiana tabacum HOM05D003764 ORTHO05D004356 1.8e-145 520.0 352 69.3
RcHm_v2.0_Chr6g0304171 Rosa chinensis HOM05D003764 ORTHO05D004356 4.0e-145 518.8 443 59.4
FAN27G3424 Fragaria x ananassa HOM05D003764 ORTHO05D004356 5.2e-145 518.5 441 58.0
MD08G1003100 Malus domestica HOM05D003764 ORTHO05D004356 1.2e-144 517.3 446 58.5
FAN15G2102 Fragaria x ananassa HOM05D003764 ORTHO05D004356 1.5e-144 516.9 441 57.6
Nitab4.5_0000588g0130 Nicotiana tabacum HOM05D003764 ORTHO05D004356 2.0e-144 516.5 447 58.2
PSO170G5992 Papaver somniferum HOM05D003764 ORTHO05D004356 3.4e-144 515.8 446 57.4
Solyc04g082280.3 Solanum lycopersicum HOM05D003764 ORTHO05D004356 7.5e-144 514.6 350 68.9
Glyma.04G018600 Glycine max HOM05D003764 ORTHO05D004356 9.7e-144 514.2 349 68.2
Sabra05G0193100 Salix brachista HOM05D003764 ORTHO05D004356 9.7e-144 514.2 440 59.1
Prupe.1G355100 Prunus persica HOM05D003764 ORTHO05D004356 1.3e-143 513.8 448 58.3
Sopen04g035900 Solanum pennellii HOM05D003764 ORTHO05D004356 1.3e-143 513.8 350 68.6
FvH4_2g37560 Fragaria vesca HOM05D003764 ORTHO05D004356 3.7e-143 512.3 441 57.4
Peaxi162Scf00104g00322 Petunia axillaris HOM05D003764 ORTHO05D004356 1.4e-142 510.4 347 68.9
Hund01762 Selenicereus undatus HOM05D003764 ORTHO05D004356 1.4e-142 510.4 434 60.1
Potri.002G011400 Populus trichocarpa HOM05D003764 ORTHO05D004356 1.8e-142 510.0 448 56.7
TPR.G38113 Trifolium pratense HOM05D003764 ORTHO05D004356 1.8e-142 510.0 347 68.0
PGSC0003DMG400009974 Solanum tuberosum HOM05D003764 ORTHO05D004356 4.1e-142 508.8 347 68.3
Eucgr.F01754 Eucalyptus grandis HOM05D003764 ORTHO05D004356 5.3e-142 508.4 438 58.0
Lj1g0016047 Lotus japonicus HOM05D003764 ORTHO05D004356 9.1e-142 507.7 352 67.3
Thecc.08G057700 Theobroma cacao HOM05D003764 ORTHO05D004356 9.1e-142 507.7 438 58.4
ClCG11G018640 Citrullus lanatus HOM05D003764 ORTHO05D004356 2.0e-141 506.5 435 58.6
SGA_v2.0_scaffold275G46585 Striga asiatica HOM05D003764 ORTHO05D004356 3.5e-141 505.8 353 67.1
arahy.Tifrunner.gnm1.ann1.CSAI9D Arachis hypogaea HOM05D003764 ORTHO05D004356 7.7e-141 504.6 428 59.1
arahy.Tifrunner.gnm1.ann1.I18LAP Arachis hypogaea HOM05D003764 ORTHO05D004356 1.3e-140 503.8 428 59.1
Duzib116G0421 Durio zibethinus HOM05D003764 ORTHO05D004356 1.7e-140 503.4 438 57.1
Lj4A804T73 Lonicera japonica HOM05D003764 ORTHO05D004356 2.2e-140 503.1 429 59.0
Sabra02G0008800 Salix brachista HOM05D003764 ORTHO05D004356 2.9e-140 502.7 446 57.2
COL.COLO4_03998 Corchorus olitorius HOM05D003764 ORTHO05D004356 5.0e-140 501.9 440 58.4
MSTRG.1112 Avicennia marina HOM05D003764 ORTHO05D004356 8.5e-140 501.1 402 60.9
MSTRG.25298 Avicennia marina HOM05D003764 ORTHO05D004356 1.1e-139 500.7 438 57.5
Glyma.06G018900 Glycine max HOM05D003764 ORTHO05D004356 1.1e-139 500.7 349 66.8
CsaV3_4G037170 Cucumis sativus L. HOM05D003764 ORTHO05D004356 2.5e-139 499.6 434 58.5
Lalb_Chr11g0061681 Lupinus albus HOM05D003764 ORTHO05D004356 2.1e-138 496.5 347 66.6
CSS0020809 Camellia sinensis var. sinensis HOM05D003764 ORTHO05D004356 2.7e-138 496.1 412 61.2
AUR62043557 Chenopodium quinoa HOM05D003764 ORTHO05D004356 3.6e-138 495.7 350 65.7
Medtr3g115180 Medicago truncatula HOM05D003764 ORTHO05D004356 3.6e-138 495.7 439 56.9
Ca_15440_v3 Cicer arietinum L. HOM05D003764 ORTHO05D004356 6.1e-138 495.0 435 57.0
Psat0s5633g0040 Pisum sativum HOM05D003764 ORTHO05D004356 6.1e-138 495.0 347 65.7
Ah.00g000380 Amaranthus hybridus HOM05D003764 ORTHO05D004356 8.0e-138 494.6 357 63.9
Eucgr.F03548 Eucalyptus grandis HOM05D003764 ORTHO05D004356 3.0e-137 492.7 431 56.6
Cc10_g00740 Coffea canephora HOM05D003764 ORTHO05D004356 6.8e-137 491.5 438 57.8
Gohir.D01G093100 Gossypium hirsutum HOM05D003764 ORTHO05D004356 6.8e-137 491.5 442 55.0
AUR62036887 Chenopodium quinoa HOM05D003764 ORTHO05D004356 2.0e-136 490.0 350 65.1
Gorai.002G118500 Gossypium raimondii HOM05D003764 ORTHO05D004356 2.0e-136 490.0 442 55.0
MELO3C017015.2 Cucumis melo HOM05D003764 ORTHO05D004356 2.6e-136 489.6 431 57.1
SalBow7G4127 Salvia bowleyana HOM05D003764 ORTHO05D004356 3.4e-136 489.2 394 60.4
Gorai.009G188300 Gossypium raimondii HOM05D003764 ORTHO05D004356 1.7e-135 486.9 344 65.1
Sed0020753 Sechium edule HOM05D003764 ORTHO05D004356 1.7e-135 486.9 347 65.7
Sc02g0009060 Simmondsia chinensis HOM05D003764 ORTHO05D004356 1.1e-134 484.2 348 63.8
SHI08003 Sapria himalayana HOM05D003764 ORTHO05D004356 1.4e-134 483.8 347 65.7
Lalb_Chr23g0265831 Lupinus albus HOM05D003764 ORTHO05D004356 1.8e-134 483.4 347 64.6
MBI08_g19981_MAGBIO Magnolia biondii HOM05D003764 ORTHO05D004356 1.8e-134 483.4 398 58.8
Aqoxy6G01751 Aquilegia oxysepala HOM05D003764 ORTHO05D004356 2.4e-134 483.0 354 63.6
Lsat_1_v5_gn_2_6240 Lactuca sativa HOM05D003764 ORTHO05D004356 3.1e-134 482.6 341 66.3
Gohir.A05G180000 Gossypium hirsutum HOM05D003764 ORTHO05D004356 5.4e-134 481.9 344 64.8
EL10Ac1g01980 Beta vulgaris HOM05D003764 ORTHO05D004356 2.0e-133 479.9 349 64.5
Gohir.A01G106600 Gossypium hirsutum HOM05D003764 ORTHO05D004356 1.0e-132 477.6 442 54.3
SGA_v2.0_scaffold275G46588 Striga asiatica HOM05D003764 ORTHO05D004356 1.0e-132 477.6 333 66.4
unitig_747.g21519 Utricularia gibba HOM05D003764 ORTHO05D004356 5.0e-132 475.3 342 62.6
Gohir.D05G183000 Gossypium hirsutum HOM05D003764 ORTHO05D004356 3.3e-131 472.6 344 64.2
HanXRQChr14g0428241 Helianthus annuus HOM05D003764 ORTHO05D004356 1.2e-130 470.7 433 54.3
Duzib093G1245 Durio zibethinus HOM05D003764 ORTHO05D004356 4.0e-129 465.7 348 62.6
PSO017G4841 Papaver somniferum HOM05D003764 ORTHO05D004356 7.5e-128 461.5 431 54.3
Cfa014062 Carpinus fangiana HOM05D003764 ORTHO05D004356 1.3e-127 460.7 439 54.7
A09p51670 Brassica napus HOM05D003764 ORTHO05D004356 3.7e-127 459.1 244 86.9
PSO170G4333 Papaver somniferum HOM05D003764 ORTHO05D004356 4.9e-127 458.8 426 54.2
PSO170G6284 Papaver somniferum HOM05D003764 ORTHO05D004356 4.9e-127 458.8 350 62.9
CDE06G1096 Ceratophyllum demersum HOM05D003764 ORTHO05D004356 1.4e-126 457.2 348 60.9
HanXRQChr15g0491851 Helianthus annuus HOM05D003764 ORTHO05D004356 1.4e-126 457.2 364 60.4
PSO017G3905 Papaver somniferum HOM05D003764 ORTHO05D004356 2.4e-126 456.4 429 54.5
Peaxi162Scf00064g01016 Petunia axillaris HOM05D003764 ORTHO05D004356 3.2e-126 456.1 352 64.5
PSO170G2421 Papaver somniferum HOM05D003764 ORTHO05D004356 3.5e-125 452.6 426 54.7
PSO170G1328 Papaver somniferum HOM05D003764 ORTHO05D004356 3.9e-124 449.1 355 61.7
ATR0106G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 5.0e-124 448.7 369 56.9
Sabra02G0008700 Salix brachista HOM05D003764 ORTHO05D004356 1.9e-123 446.8 433 53.8
PSO017G1302 Papaver somniferum HOM05D003764 ORTHO05D004356 9.5e-123 444.5 426 54.0
PSO017G1698 Papaver somniferum HOM05D003764 ORTHO05D004356 2.8e-122 443.0 356 59.3
HPP92_026195 Vanilla planifolia HOM05D003764 ORTHO05D004356 1.8e-121 440.3 434 50.5
PSO104G0104 Papaver somniferum HOM05D003764 ORTHO05D004356 3.1e-121 439.5 404 55.0
PSO017G1063 Papaver somniferum HOM05D003764 ORTHO05D004356 4.0e-121 439.1 427 52.5
PSO017G3919 Papaver somniferum HOM05D003764 ORTHO05D004356 6.8e-121 438.3 423 53.2
PSO170G3515 Papaver somniferum HOM05D003764 ORTHO05D004356 1.5e-120 437.2 424 53.8
Cpa.g.sc26.208 Carica papaya HOM05D003764 ORTHO05D004356 7.0e-118 428.3 292 68.5
HPP92_022192 Vanilla planifolia HOM05D003764 ORTHO05D004356 3.4e-112 409.5 341 56.6
HPP92_022186 Vanilla planifolia HOM05D003764 ORTHO05D004356 2.4e-110 403.3 341 56.0
HPP92_026182 Vanilla planifolia HOM05D003764 ORTHO05D004356 2.7e-109 399.8 381 51.4
MD15G1002800 Malus domestica HOM05D003764 ORTHO05D004356 1.1e-105 387.9 251 69.3
unitig_0.g1266 Utricularia gibba HOM05D003764 ORTHO05D004356 4.0e-105 386.0 340 53.5
SEGI_06086 Sequoiadendron giganteum HOM05D003764 ORTHO05D004356 8.9e-105 384.8 371 52.0
SEGI_23487 Sequoiadendron giganteum HOM05D003764 ORTHO05D004356 1.2e-104 384.4 339 54.9
unitig_699.g19216 Utricularia gibba HOM05D003764 ORTHO05D004356 1.2e-104 384.4 345 53.6
DCAR_013910 Daucus carota HOM05D003764 ORTHO05D004356 3.2e-102 376.3 440 48.6
unitig_747.g21882 Utricularia gibba HOM05D003764 ORTHO05D004356 7.1e-102 375.2 377 48.0
CDE07G0072 Ceratophyllum demersum HOM05D003764 ORTHO05D004356 2.3e-100 370.2 305 56.4
unitig_699.g19217 Utricularia gibba HOM05D003764 ORTHO05D004356 8.1e-98 361.7 345 51.3
TWI12G0241 Tripterygium wilfordii HOM05D003764 ORTHO05D004356 4.0e-97 359.4 250 64.0
Pp3c14_15070 Physcomitrium patens HOM05D003764 ORTHO05D004356 3.9e-92 342.8 388 46.9
Sabra02G0009000 Salix brachista HOM05D003764 ORTHO05D004356 1.6e-90 337.4 240 63.8
AagrBONN_evm.TU.Sc2ySwM_228.3221 Anthoceros agrestis HOM05D003764 ORTHO05D004356 8.1e-90 335.1 340 47.6
Mapoly0049s0068 Marchantia polymorpha HOM05D003764 ORTHO05D004356 1.2e-88 331.3 339 47.8
Mapoly0006s0188 Marchantia polymorpha HOM05D003764 ORTHO05D004356 1.7e-87 327.4 366 46.2
HanXRQChr14g0428221 Helianthus annuus HOM05D003764 ORTHO05D004356 9.3e-86 321.6 236 60.6
Atru.chr13.152 Acer truncatum HOM05D003764 ORTHO05D004356 1.6e-85 320.9 303 57.1
Zm00001eb209300 Zea mays HOM05D003764 ORTHO05D004356 2.3e-84 317.0 418 42.6
SMO141G0079 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 1.5e-83 314.3 348 46.0
ECA238G1445 Erigeron canadensis HOM05D003764 ORTHO05D004356 4.9e-79 299.3 236 56.8
AagrBONN_evm.TU.Sc2ySwM_368.3397 Anthoceros agrestis HOM05D003764 ORTHO05D004356 9.3e-78 295.0 321 46.7
SMO364G0266 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 8.1e-74 282.0 346 40.8
Pp3c1_32600 Physcomitrium patens HOM05D003764 ORTHO05D004356 1.1e-73 281.6 341 42.5
Pp3c17_7390 Physcomitrium patens HOM05D003764 ORTHO05D004356 6.9e-73 278.9 347 42.7
SMO147G0236 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 6.9e-73 278.9 348 41.4
unitig_52.g17754 Utricularia gibba HOM05D003764 ORTHO05D004356 4.5e-72 276.2 241 52.3
Pp3c2_5370 Physcomitrium patens HOM05D003764 ORTHO05D004356 2.5e-70 270.4 345 40.3
Pp3c17_5840 Physcomitrium patens HOM05D003764 ORTHO05D004356 4.2e-70 269.6 351 41.6
SMO367G1018 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 3.8e-63 246.5 344 36.9
CBR_g3019 Chara braunii HOM05D003764 ORTHO05D004356 3.5e-61 240.0 408 35.8
Aqoxy6G01618 Aquilegia oxysepala HOM05D003764 ORTHO05D004356 7.7e-40 169.1 152 58.6
DCAR_010127 Daucus carota HOM05D003764 ORTHO05D004356 1.3e-34 151.8 154 50.6
CBR_g9154 Chara braunii HOM05D003764 ORTHO05D004356 2.9e-31 140.6 417 26.1
Cfa013034 Carpinus fangiana HOM05D003764 ORTHO05D004356 1.0e-23 115.5 85 58.8
ATR0756G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 1.6e-21 108.2 114 43.0
SMO170G0013 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 2.8e-18 97.4 121 41.3
Potri.012G136700 Populus trichocarpa HOM05D003764 ORTHO05D004356 2.0e-16 91.3 135 41.5
Os02g0119600 Oryza sativa ssp. japonica HOM05D003764 ORTHO05D004356 4.5e-16 90.1 77 46.8
ATR0276G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 2.9e-15 87.4 100 40.0
ATR0138G019 Amborella trichopoda HOM05D003764 ORTHO05D004356 8.9e-12 75.9 87 44.8
ATR0555G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 6.6e-07 59.7 67 34.3
Nn1g01454 Nelumbo nucifera HOM05D003764 ORTHO05D004356 6.6e-07 59.7 36 75.0
Prupe.6G163800 Prunus persica HOM05D003764 ORTHO05D335910 7.3e-06 56.2 53 60.4


User provided reference genes

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