Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10017866m.g Eutrema salsugineum HOM05D008131 ORTHO05D010989 1.1e-47 193.0 94 100.0
Carub.0003s0078 Capsella rubella HOM05D008131 ORTHO05D010989 2.0e-30 135.6 97 68.0
AT3G01331 Arabidopsis thaliana HOM05D008131 ORTHO05D010989 8.4e-29 130.2 89 70.8
CARHR075660 Cardamine hirsuta HOM05D008131 ORTHO05D010989 1.5e-22 109.4 96 57.3
BraA05t23190Z Brassica rapa HOM05D008131 ORTHO05D010989 5.5e-20 100.9 85 54.1
AL3G10890 Arabidopsis lyrata HOM05D008131 ORTHO05D010989 2.1e-19 99.0 88 59.1
BcaC05g30404 Brassica carinata HOM05D008131 ORTHO05D010989 2.1e-19 99.0 85 52.9
BolC5t35139H Brassica oleracea HOM05D008131 ORTHO05D010989 2.7e-19 98.6 85 52.9
A05p44670 Brassica napus HOM05D008131 ORTHO05D010989 6.0e-19 97.4 85 52.9
AL3G10900 Arabidopsis lyrata HOM05D008131 ORTHO05D010989 1.0e-18 96.7 65 70.8
CARHR068640 Cardamine hirsuta HOM05D008131 ORTHO05D010989 3.9e-18 94.7 89 55.1
C09p75250 Brassica napus HOM05D008131 ORTHO05D010989 2.5e-17 92.0 82 51.2
Carub.0002s0973 Capsella rubella HOM05D008131 ORTHO05D010989 4.3e-17 91.3 83 54.2
Carub.0003s0079 Capsella rubella HOM05D008131 ORTHO05D010989 4.3e-17 91.3 88 51.1
AT3G01325 Arabidopsis thaliana HOM05D008131 ORTHO05D010989 1.6e-16 89.4 88 52.3
AT3G27425 Arabidopsis thaliana HOM05D008131 ORTHO05D010989 1.6e-16 89.4 88 53.4
A05p03050 Brassica napus HOM05D008131 ORTHO05D010989 6.3e-16 87.4 96 51.0
BraA05t19296Z Brassica rapa HOM05D008131 ORTHO05D010989 6.3e-16 87.4 96 51.0
Thhalv10017595m.g Eutrema salsugineum HOM05D008131 ORTHO05D010989 2.4e-15 85.5 88 52.3
BcaC05g30405 Brassica carinata HOM05D008131 ORTHO05D010989 3.1e-15 85.1 85 45.9
BolC4t22002H Brassica oleracea HOM05D008131 ORTHO05D010989 5.3e-15 84.3 96 50.0
Thhalv10017888m.g Eutrema salsugineum HOM05D008131 ORTHO05D010989 6.9e-15 84.0 89 50.6
BcaC05g30471 Brassica carinata HOM05D008131 ORTHO05D010989 9.0e-15 83.6 85 47.1
BcaC05g30472 Brassica carinata HOM05D008131 ORTHO05D010989 9.0e-15 83.6 85 47.1
BcaC05g30473 Brassica carinata HOM05D008131 ORTHO05D010989 9.0e-15 83.6 85 47.1
Carub.0005s0579 Capsella rubella HOM05D008131 ORTHO05D010989 1.5e-14 82.8 83 50.6
AT3G01324 Arabidopsis thaliana HOM05D008131 ORTHO05D010989 4.5e-14 81.3 89 49.4
Thhalv10006373m.g Eutrema salsugineum HOM05D008131 ORTHO05D010989 4.5e-14 81.3 88 47.7
BcaC02g12435 Brassica carinata HOM05D008131 ORTHO05D010989 5.9e-14 80.9 96 49.0
BcaNung03234 Brassica carinata HOM05D008131 ORTHO05D010989 5.9e-14 80.9 85 49.4
C04p03690 Brassica napus HOM05D008131 ORTHO05D010989 5.9e-14 80.9 96 49.0
AT3G01329 Arabidopsis thaliana HOM05D008131 ORTHO05D010989 3.8e-13 78.2 88 47.7
BraA07t31270Z Brassica rapa HOM05D008131 ORTHO05D015509 3.8e-13 78.2 85 43.5
BcaB03g14831 Brassica carinata HOM05D008131 ORTHO05D015509 5.0e-13 77.8 87 43.7
A07p37080 Brassica napus HOM05D008131 ORTHO05D015509 5.0e-13 77.8 85 43.5
Carub.0003s2828 Capsella rubella HOM05D008131 ORTHO05D010989 1.1e-12 76.6 92 47.8
AL5G16790 Arabidopsis lyrata HOM05D008131 ORTHO05D010989 1.9e-12 75.9 67 52.2
Thhalv10026915m.g Eutrema salsugineum HOM05D008131 ORTHO05D014435 2.5e-12 75.5 84 42.9
C06p44680 Brassica napus HOM05D008131 ORTHO05D015509 4.2e-12 74.7 85 41.2
C06p44630 Brassica napus HOM05D008131 ORTHO05D015509 5.5e-12 74.3 85 41.2
BolC6t39529H Brassica oleracea HOM05D008131 ORTHO05D015509 5.5e-12 74.3 85 41.2
AT3G01328 Arabidopsis thaliana HOM05D008131 ORTHO05D014435 7.2e-12 73.9 86 47.7
C06p44640 Brassica napus HOM05D008131 ORTHO05D015509 7.2e-12 73.9 85 41.2
BolC1t05952H Brassica oleracea HOM05D008131 ORTHO05D010989 9.4e-12 73.6 88 43.2
BraA01t04660Z Brassica rapa HOM05D008131 ORTHO05D010989 9.4e-12 73.6 88 43.2
BNapus_Darmor_BZH_scaffold_119p00090 Brassica napus HOM05D008131 ORTHO05D010989 2.7e-11 72.0 88 42.0
BNapus_Darmor_BZH_scaffold_133p00090 Brassica napus HOM05D008131 ORTHO05D010989 2.7e-11 72.0 88 42.0
BNapus_Darmor_BZH_scaffold_97p00350 Brassica napus HOM05D008131 ORTHO05D010989 2.7e-11 72.0 88 42.0
C06p44650 Brassica napus HOM05D008131 ORTHO05D015509 3.6e-11 71.6 86 41.9
Sp3g00750 Schrenkiella parvula HOM05D008131 ORTHO05D010989 3.6e-11 71.6 82 47.6
AT3G01322 Arabidopsis thaliana HOM05D008131 ORTHO05D014435 1.4e-10 69.7 86 45.3
BcaC09g47667 Brassica carinata HOM05D008131 ORTHO05D010989 1.4e-10 69.7 75 42.7
BolC6t39528H Brassica oleracea HOM05D008131 ORTHO05D015509 1.4e-10 69.7 87 39.1
AT3G01327 Arabidopsis thaliana HOM05D008131 ORTHO05D014435 1.8e-10 69.3 86 44.2
CARHR026580 Cardamine hirsuta HOM05D008131 ORTHO05D010989 8.8e-10 67.0 91 41.8
Carub.0003s0077 Capsella rubella HOM05D008131 ORTHO05D114443 1.3e-08 63.2 73 38.4
AT3G01323 Arabidopsis thaliana HOM05D008131 ORTHO05D014435 6.3e-08 60.8 96 41.7
BcaC02g09671 Brassica carinata HOM05D008131 ORTHO05D014435 6.3e-08 60.8 62 51.6
C04p45400 Brassica napus HOM05D008131 ORTHO05D014435 6.3e-08 60.8 62 51.6
BolC4t26122H Brassica oleracea HOM05D008131 ORTHO05D014435 6.3e-08 60.8 62 51.6
Carub.0003s0080 Capsella rubella HOM05D008131 ORTHO05D014435 2.4e-07 58.9 93 39.8
A04p11670 Brassica napus HOM05D008131 ORTHO05D014435 4.1e-07 58.2 62 50.0
BraA04t16835Z Brassica rapa HOM05D008131 ORTHO05D014435 4.1e-07 58.2 62 50.0
CARHR075680 Cardamine hirsuta HOM05D008131 ORTHO05D014435 3.4e-06 55.1 75 48.0


User provided reference genes

Program Settings