Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10017745m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 8.5e-75 283.5 135 100.0
Thhalv10002853m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 2.9e-54 215.3 120 84.2
Thhalv10022239m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 8.3e-54 213.8 116 89.7
Sp7g02510 Schrenkiella parvula HOM05D007693 ORTHO05D002086 2.1e-49 199.1 135 69.6
Sp7g12150 Schrenkiella parvula HOM05D007693 ORTHO05D002086 9.8e-47 190.3 135 67.4
Carub.0003s3077 Capsella rubella HOM05D007693 ORTHO05D002086 6.2e-41 171.0 132 62.1
BraA10t42989Z Brassica rapa HOM05D007693 ORTHO05D002086 2.3e-40 169.1 132 59.8
BcaB05g22684 Brassica carinata HOM05D007693 ORTHO05D002086 3.4e-39 165.2 127 63.8
CARHR055980 Cardamine hirsuta HOM05D007693 ORTHO05D002086 5.1e-35 151.4 108 63.9
CARHR108830 Cardamine hirsuta HOM05D007693 ORTHO05D002086 4.3e-34 148.3 143 53.8
BcaB04g17442 Brassica carinata HOM05D007693 ORTHO05D002086 2.0e-31 139.4 113 61.1
BolC4t28282H Brassica oleracea HOM05D007693 ORTHO05D002086 9.3e-29 130.6 130 52.3
Carub.0008s0706 Capsella rubella HOM05D007693 ORTHO05D002086 2.1e-28 129.4 93 66.7
C06p36600 Brassica napus HOM05D007693 ORTHO05D002086 1.3e-27 126.7 130 51.5
AL1G49470 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 2.3e-27 125.9 140 48.6
AL9U10420 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 2.3e-27 125.9 140 48.6
BcaC01g00556 Brassica carinata HOM05D007693 ORTHO05D002086 6.2e-25 117.9 136 47.1
C07p06000 Brassica napus HOM05D007693 ORTHO05D002086 6.2e-25 117.9 136 46.3
BolC7t41011H Brassica oleracea HOM05D007693 ORTHO05D002086 6.2e-25 117.9 136 46.3
AT2G06265 Arabidopsis thaliana HOM05D007693 ORTHO05D002086 2.4e-24 115.9 130 48.5
C09p24970 Brassica napus HOM05D007693 ORTHO05D002086 1.5e-23 113.2 126 49.2
BcaB04g17832 Brassica carinata HOM05D007693 ORTHO05D002086 9.9e-23 110.5 98 52.0
AT2G07505 Arabidopsis thaliana HOM05D007693 ORTHO05D002086 1.3e-22 110.2 142 45.8
BcaB02g06468 Brassica carinata HOM05D007693 ORTHO05D002086 1.3e-22 110.2 126 42.9
BcaB08g35719 Brassica carinata HOM05D007693 ORTHO05D002086 1.1e-21 107.1 116 48.3
Thhalv10012038m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 3.0e-19 99.0 165 35.8
AL2G18820 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 1.1e-18 97.1 143 42.7
AL4G16420 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 1.1e-18 97.1 143 42.7
BcaB04g20521 Brassica carinata HOM05D007693 ORTHO05D002086 3.3e-18 95.5 104 44.2
AL22U10020 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 4.3e-18 95.1 143 40.6
Thhalv10011039m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 1.3e-17 93.6 125 40.8
Thhalv10003330m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 2.1e-17 92.8 87 51.7
BcaB06g26026 Brassica carinata HOM05D007693 ORTHO05D002086 4.8e-17 91.7 98 46.9
Thhalv10003362m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 4.8e-17 91.7 124 41.1
BcaC07g37014 Brassica carinata HOM05D007693 ORTHO05D002086 1.1e-16 90.5 58 67.2
BraA06t24544Z Brassica rapa HOM05D007693 ORTHO05D002086 1.1e-16 90.5 84 51.2
BraA06t25204Z Brassica rapa HOM05D007693 ORTHO05D002086 1.8e-16 89.7 76 51.3
BcaB06g27481 Brassica carinata HOM05D007693 ORTHO05D002086 3.1e-16 89.0 75 53.3
A04p22190 Brassica napus HOM05D007693 ORTHO05D002086 5.3e-16 88.2 66 62.1
BraA10t43040Z Brassica rapa HOM05D007693 ORTHO05D002086 5.3e-16 88.2 66 62.1
BcaC04g21625 Brassica carinata HOM05D001038 ORTHO05D016703 6.9e-16 87.8 69 58.0
BraA05t22114Z Brassica rapa HOM05D007693 ORTHO05D002086 1.2e-15 87.0 66 62.1
BcaB07g32567 Brassica carinata HOM05D001038 ORTHO05D010763 3.4e-15 85.5 66 60.6
BcaC06g35712 Brassica carinata HOM05D007693 ORTHO05D002086 1.3e-14 83.6 58 65.5
Thhalv10029337m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 4.9e-14 81.6 82 48.8
SpUn1230_0020 Schrenkiella parvula HOM05D007693 ORTHO05D002086 6.4e-14 81.3 132 39.4
BcaB04g16994 Brassica carinata HOM05D007693 ORTHO05D002086 1.9e-13 79.7 129 41.9
BolC8t47992H Brassica oleracea HOM05D007693 ORTHO05D002086 4.2e-13 78.6 129 38.8
Sp5g21400 Schrenkiella parvula HOM05D018387 ORTHO05D002086 9.3e-13 77.4 92 44.6
BcaB05g22932 Brassica carinata HOM05D007693 ORTHO05D002086 1.6e-12 76.6 113 36.3
BcaC05g25266 Brassica carinata HOM05D007693 ORTHO05D002086 4.6e-12 75.1 132 36.4
BcaB05g24592 Brassica carinata HOM05D007693 ORTHO05D002086 6.0e-12 74.7 60 58.3
BcaB06g29566 Brassica carinata HOM05D007693 ORTHO05D002086 6.0e-12 74.7 60 58.3
BcaC05g28311 Brassica carinata HOM05D007693 ORTHO05D002086 6.0e-12 74.7 91 45.1
BcaC05g29744 Brassica carinata HOM05D007693 ORTHO05D002086 6.0e-12 74.7 91 44.0
BcaC06g32504 Brassica carinata HOM05D007693 ORTHO05D002086 6.0e-12 74.7 91 44.0
BraA10t43661Z Brassica rapa HOM05D007693 ORTHO05D002086 6.0e-12 74.7 48 66.7
Sp6g12290 Schrenkiella parvula HOM05D007693 ORTHO05D002086 1.3e-11 73.6 161 32.9
BolC3t20530H Brassica oleracea HOM05D007693 ORTHO05D002086 2.3e-11 72.8 60 58.3
BcaC03g14636 Brassica carinata HOM05D007693 ORTHO05D002086 3.0e-11 72.4 91 44.0
C05p36680 Brassica napus HOM05D007693 ORTHO05D002086 3.0e-11 72.4 74 47.3
AL6G38570 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 3.9e-11 72.0 147 37.4
BcaC06g33294 Brassica carinata HOM05D007693 ORTHO05D002086 3.9e-11 72.0 58 51.7
CARHR033990 Cardamine hirsuta HOM05D007693 ORTHO05D002086 3.9e-11 72.0 59 61.0
BcaC02g11475 Brassica carinata HOM05D007693 ORTHO05D002086 6.7e-11 71.2 130 40.8
BcaB02g10221 Brassica carinata HOM05D007693 ORTHO05D002086 1.9e-10 69.7 91 42.9
BcaC06g36209 Brassica carinata HOM05D000977 ORTHO05D002086 1.9e-10 69.7 139 37.4
BcaC03g15315 Brassica carinata HOM05D007693 ORTHO05D002086 2.5e-10 69.3 64 53.1
Sp5g15320 Schrenkiella parvula HOM05D007693 ORTHO05D002086 2.5e-10 69.3 115 36.5
Sp6g08580 Schrenkiella parvula HOM05D018387 ORTHO05D002086 2.5e-10 69.3 74 47.3
Sp1g34950 Schrenkiella parvula HOM05D007693 ORTHO05D002086 3.3e-10 68.9 64 53.1
C05p48940 Brassica napus HOM05D007693 ORTHO05D002086 5.6e-10 68.2 74 45.9
BcaB08g34442 Brassica carinata HOM05D007693 ORTHO05D002086 7.4e-10 67.8 59 57.6
BolC5t32402H Brassica oleracea HOM05D007693 ORTHO05D002086 9.6e-10 67.4 74 44.6
AT3G30165 Arabidopsis thaliana HOM05D007462 ORTHO05D011074 1.6e-09 66.6 66 43.9
AT1G48285 Arabidopsis thaliana HOM05D007462 ORTHO05D011074 2.1e-09 66.2 137 30.7
Aa31LG2G13790 Aethionema arabicum HOM05D007462 ORTHO05D002086 2.8e-09 65.9 134 36.6
BcaB05g23148 Brassica carinata HOM05D007693 ORTHO05D002086 2.8e-09 65.9 67 41.8
BcaC08g44290 Brassica carinata HOM05D007693 ORTHO05D002086 2.8e-09 65.9 129 33.3
AT2G37125 Arabidopsis thaliana HOM05D007462 ORTHO05D011074 3.7e-09 65.5 130 30.8
Sp7g13130 Schrenkiella parvula HOM05D007693 ORTHO05D002086 3.7e-09 65.5 87 43.7
THA.LOC104804713 Tarenaya hassleriana HOM05D007462 ORTHO05D002086 3.7e-09 65.5 68 45.6
BolC9t55840H Brassica oleracea HOM05D007693 ORTHO05D002086 8.2e-09 64.3 39 66.7
THA.LOC104806974 Tarenaya hassleriana HOM05D007462 ORTHO05D002086 8.2e-09 64.3 102 36.3
BolC8t49549H Brassica oleracea HOM05D007693 ORTHO05D002086 1.8e-08 63.2 37 70.3
Sp7g03170 Schrenkiella parvula HOM05D018387 ORTHO05D002086 1.8e-08 63.2 72 45.8
BcaB07g33925 Brassica carinata HOM05D000888 ORTHO05D000740 3.1e-08 62.4 86 34.9
BraA08t34216Z Brassica rapa HOM05D007693 ORTHO05D002086 5.3e-08 61.6 39 64.1
BcaC03g14861 Brassica carinata HOM05D007462 ORTHO05D011074 9.0e-08 60.8 120 30.8
Sp7g08580 Schrenkiella parvula HOM05D017451 ORTHO05D019359 1.2e-07 60.5 85 40.0
SpUn0135_0020 Schrenkiella parvula HOM05D017451 ORTHO05D019359 1.2e-07 60.5 85 40.0
BcaB07g33397 Brassica carinata HOM05D004489 ORTHO05D000740 1.5e-07 60.1 58 46.6
BcaB07g33915 Brassica carinata HOM05D007693 ORTHO05D015462 2.0e-07 59.7 58 44.8
BcaC01g02140 Brassica carinata HOM05D007462 ORTHO05D002086 2.0e-07 59.7 68 44.1
BolC3t19061H Brassica oleracea HOM05D007462 ORTHO05D002086 2.0e-07 59.7 68 44.1
BraA01t02729Z Brassica rapa HOM05D007462 ORTHO05D002086 2.0e-07 59.7 88 36.4
BcaB07g32457 Brassica carinata HOM05D007462 ORTHO05D002086 2.6e-07 59.3 63 46.0
BcaC05g29515 Brassica carinata HOM05D000589 ORTHO05D001885 2.6e-07 59.3 56 42.9
BcaC06g36717 Brassica carinata HOM05D000977 ORTHO05D002086 2.6e-07 59.3 136 35.3
BraA02t08314Z Brassica rapa HOM05D007462 ORTHO05D002086 2.6e-07 59.3 88 36.4
SpUn1120_0010 Schrenkiella parvula HOM05D017451 ORTHO05D019359 2.6e-07 59.3 127 31.5
BcaB04g18049 Brassica carinata HOM05D007693 ORTHO05D015462 3.4e-07 58.9 134 32.1
BcaC02g07772 Brassica carinata HOM05D007462 ORTHO05D002086 3.4e-07 58.9 68 44.1
BcaC03g14955 Brassica carinata HOM05D007462 ORTHO05D002086 3.4e-07 58.9 68 44.1
BcaC06g36027 Brassica carinata HOM05D007462 ORTHO05D002086 3.4e-07 58.9 68 44.1
BolC2t11294H Brassica oleracea HOM05D006289 ORTHO05D002086 3.4e-07 58.9 95 34.7
BcaC01g01799 Brassica carinata HOM05D007462 ORTHO05D011074 4.5e-07 58.5 120 30.0
BcaC02g11566 Brassica carinata HOM05D007462 ORTHO05D011074 4.5e-07 58.5 119 31.1
BcaB04g19811 Brassica carinata HOM05D007462 ORTHO05D002086 5.8e-07 58.2 62 41.9
BcaB06g26931 Brassica carinata HOM05D007693 ORTHO05D015462 7.6e-07 57.8 67 38.8
BolC1t02623H Brassica oleracea HOM05D007462 ORTHO05D011074 7.6e-07 57.8 114 31.6
THA.LOC104810579 Tarenaya hassleriana HOM05D028755 ORTHO05D002086 7.6e-07 57.8 65 40.0
BcaC01g02056 Brassica carinata HOM05D007462 ORTHO05D002086 1.0e-06 57.4 68 42.6
BcaC09g48351 Brassica carinata HOM05D000209 ORTHO05D001885 1.0e-06 57.4 86 38.4
THA.LOC104803181 Tarenaya hassleriana HOM05D028755 ORTHO05D002086 1.0e-06 57.4 68 38.2
BcaC01g05867 Brassica carinata HOM05D007462 ORTHO05D011074 1.3e-06 57.0 117 32.5
BcaC04g22910 Brassica carinata HOM05D007462 ORTHO05D011074 1.3e-06 57.0 117 32.5
BcaC07g37477 Brassica carinata HOM05D007462 ORTHO05D002086 1.3e-06 57.0 68 42.6
BcaC07g38352 Brassica carinata HOM05D007462 ORTHO05D011074 1.3e-06 57.0 117 32.5
BolC1t02802H Brassica oleracea HOM05D000589 ORTHO05D000401 1.3e-06 57.0 54 44.4
BolC7t46298H Brassica oleracea HOM05D000589 ORTHO05D001885 1.3e-06 57.0 68 36.8
BolC8t47797H Brassica oleracea HOM05D007462 ORTHO05D002086 1.3e-06 57.0 68 42.6
Carub.0012s0017 Capsella rubella HOM05D007462 ORTHO05D011074 1.3e-06 57.0 67 44.8
BcaC05g24704 Brassica carinata HOM05D000589 ORTHO05D001885 1.7e-06 56.6 66 39.4
Carub.0006s2597 Capsella rubella HOM05D025401 ORTHO05D026774 1.7e-06 56.6 84 36.9
BcaB07g32763 Brassica carinata HOM05D000589 ORTHO05D001885 2.2e-06 56.2 66 37.9
BcaC07g39835 Brassica carinata HOM05D000589 ORTHO05D001885 2.2e-06 56.2 71 38.0
BolC8t49094H Brassica oleracea HOM05D000589 ORTHO05D000401 2.2e-06 56.2 103 29.1
Carub.0004s0674 Capsella rubella HOM05D025401 ORTHO05D026774 2.2e-06 56.2 81 39.5
CARHR264280 Cardamine hirsuta HOM05D007462 ORTHO05D011074 2.2e-06 56.2 84 34.5
BraA07t28690Z Brassica rapa HOM05D007462 ORTHO05D002086 2.9e-06 55.8 72 41.7
BcaC02g11886 Brassica carinata HOM05D007462 ORTHO05D002086 3.8e-06 55.5 68 42.6
BcaC02g12212 Brassica carinata HOM05D000589 ORTHO05D001885 3.8e-06 55.5 57 43.9
BcaB04g17468 Brassica carinata HOM05D007462 ORTHO05D011074 4.9e-06 55.1 131 31.3
BcaC05g26662 Brassica carinata HOM05D007462 ORTHO05D011074 4.9e-06 55.1 127 31.5
BcaC05g28653 Brassica carinata HOM05D007462 ORTHO05D011074 4.9e-06 55.1 129 30.2
BcaC07g42449 Brassica carinata HOM05D000589 ORTHO05D001885 4.9e-06 55.1 86 36.0
C08p03150 Brassica napus HOM05D000930 ORTHO05D000748 4.9e-06 55.1 125 30.4
BcaC03g14143 Brassica carinata HOM05D007462 ORTHO05D011074 6.5e-06 54.7 116 31.0
BcaC07g38572 Brassica carinata HOM05D007462 ORTHO05D011074 6.5e-06 54.7 121 29.8
BcaC08g45577 Brassica carinata HOM05D000589 ORTHO05D001885 6.5e-06 54.7 71 38.0
BolC1t01191H Brassica oleracea HOM05D007462 ORTHO05D002086 6.5e-06 54.7 68 41.2
BolC8t49444H Brassica oleracea HOM05D000589 ORTHO05D001885 6.5e-06 54.7 84 38.1
BcaB03g15647 Brassica carinata HOM05D000589 ORTHO05D001885 8.4e-06 54.3 57 42.1
BcaC05g25277 Brassica carinata HOM05D000589 ORTHO05D001885 8.4e-06 54.3 86 37.2
BcaC05g28128 Brassica carinata HOM05D007462 ORTHO05D002086 8.4e-06 54.3 62 43.5
BcaC06g36483 Brassica carinata HOM05D007462 ORTHO05D002086 8.4e-06 54.3 68 41.2
BcaC08g45815 Brassica carinata HOM05D007462 ORTHO05D011074 8.4e-06 54.3 128 30.5
Carub.0004s0663 Capsella rubella HOM05D000589 ORTHO05D001885 8.4e-06 54.3 83 32.5
Carub.0008s1552 Capsella rubella HOM05D000675 ORTHO05D002086 8.4e-06 54.3 71 36.6


User provided reference genes

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