Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10017009m.g Eutrema salsugineum HOM05D002510 ORTHO05D006928 1.8e-170 602.4 298 100.0
Sp4g21360 Schrenkiella parvula HOM05D002510 ORTHO05D006928 2.7e-153 545.4 298 90.6
AT2G39000 Arabidopsis thaliana HOM05D002510 ORTHO05D006928 5.6e-143 511.1 300 85.7
Carub.0004s2104 Capsella rubella HOM05D002510 ORTHO05D006928 5.8e-140 501.1 293 86.0
AL4G36300 Arabidopsis lyrata HOM05D002510 ORTHO05D006928 5.4e-138 494.6 286 88.1
BcaC02g12914 Brassica carinata HOM05D002510 ORTHO05D006928 1.1e-135 486.9 300 83.3
C04p67010 Brassica napus HOM05D002510 ORTHO05D006928 1.1e-133 480.3 300 82.3
CARHR133780 Cardamine hirsuta HOM05D002510 ORTHO05D006928 1.1e-133 480.3 292 83.9
BolC4t28203H Brassica oleracea HOM05D002510 ORTHO05D006928 1.4e-133 479.9 300 82.3
BraA04t18437Z Brassica rapa HOM05D002510 ORTHO05D006928 1.3e-131 473.4 302 80.5
A04p29730 Brassica napus HOM05D002510 ORTHO05D006928 5.1e-128 461.5 325 75.1
THA.LOC104827063 Tarenaya hassleriana HOM05D002510 ORTHO05D006928 1.8e-117 426.4 306 73.9
Thecc.10G074800 Theobroma cacao HOM05D002510 ORTHO05D006928 6.9e-109 397.9 287 70.4
Duzib114G0372 Durio zibethinus HOM05D002510 ORTHO05D006928 1.5e-108 396.7 291 70.1
Gohir.A10G205600 Gossypium hirsutum HOM05D002510 ORTHO05D006928 3.8e-107 392.1 230 80.0
CiPaw.01G272400 Carya illinoinensis HOM05D002510 ORTHO05D006928 6.4e-107 391.3 286 70.3
Manes.07G100200 Manihot esculenta HOM05D002510 ORTHO05D006928 1.9e-106 389.8 241 76.8
QL08p055746 Quercus lobata HOM05D002510 ORTHO05D006928 7.1e-106 387.9 304 66.1
Dinv31320 Davidia involucrata HOM05D002510 ORTHO05D006928 2.1e-105 386.3 292 67.5
Sabra08G0027000 Salix brachista HOM05D002510 ORTHO05D006928 2.7e-105 386.0 223 81.6
Glyma.10G210800 Glycine max HOM05D002510 ORTHO05D006928 4.6e-105 385.2 288 66.7
GSVIVG01016268001 Vitis vinifera HOM05D002510 ORTHO05D006928 4.6e-105 385.2 228 78.9
arahy.Tifrunner.gnm1.ann1.D0MVTX Arachis hypogaea HOM05D002510 ORTHO05D006928 6.0e-105 384.8 227 79.3
Gorai.011G239300 Gossypium raimondii HOM05D002510 ORTHO05D006928 7.9e-105 384.4 294 69.4
Potri.008G039300 Populus trichocarpa HOM05D002510 ORTHO05D006928 7.9e-105 384.4 225 80.0
Duzib128G0305 Durio zibethinus HOM05D002510 ORTHO05D006928 1.3e-104 383.6 255 73.7
Prupe.2G213200 Prunus persica HOM05D002510 ORTHO05D006928 1.3e-104 383.6 225 80.0
Glyma.20G179800 Glycine max HOM05D002510 ORTHO05D006928 2.3e-104 382.9 291 66.7
Lj5g0027397 Lotus japonicus HOM05D002510 ORTHO05D006928 5.1e-104 381.7 286 66.1
DCAR_019102 Daucus carota HOM05D002510 ORTHO05D006928 8.7e-104 380.9 230 77.4
RcHm_v2.0_Chr1g0363321 Rosa chinensis HOM05D002510 ORTHO05D006928 1.5e-103 380.2 293 66.2
Hund12054 Selenicereus undatus HOM05D002510 ORTHO05D006928 3.3e-103 379.0 237 73.8
Atru.chr12.758 Acer truncatum HOM05D002510 ORTHO05D006928 4.3e-103 378.6 237 76.4
MD07G1174400 Malus domestica HOM05D002510 ORTHO05D006928 4.3e-103 378.6 301 63.8
Haze_16887 Corylus avellana HOM05D002510 ORTHO05D006928 7.4e-103 377.9 294 66.7
Lalb_Chr02g0142201 Lupinus albus HOM05D002510 ORTHO05D006928 9.6e-103 377.5 287 66.9
MD01G1108300 Malus domestica HOM05D002510 ORTHO05D006928 1.3e-102 377.1 295 64.7
Medtr1g095000 Medicago truncatula HOM05D002510 ORTHO05D006928 1.3e-102 377.1 288 64.9
arahy.Tifrunner.gnm1.ann1.B5KM0B Arachis hypogaea HOM05D002510 ORTHO05D006928 1.6e-102 376.7 287 67.2
Eucgr.G02836 Eucalyptus grandis HOM05D002510 ORTHO05D006928 1.6e-102 376.7 285 67.0
FAN01G2940 Fragaria x ananassa HOM05D002510 ORTHO05D007210 1.6e-102 376.7 299 65.2
HanXRQChr14g0456861 Helianthus annuus HOM05D002510 ORTHO05D006928 1.6e-102 376.7 228 77.6
Phvul.007G094800 Phaseolus vulgaris HOM05D002510 ORTHO05D006928 2.8e-102 375.9 287 65.5
Psat6g183480 Pisum sativum HOM05D002510 ORTHO05D006928 2.8e-102 375.9 288 64.6
FvH4_7g19440 Fragaria vesca HOM05D002510 ORTHO05D006928 3.6e-102 375.6 294 66.7
Gohir.D10G213800 Gossypium hirsutum HOM05D002510 ORTHO05D006928 4.8e-102 375.2 228 78.5
TWI15G0405 Tripterygium wilfordii HOM05D002510 ORTHO05D006928 4.8e-102 375.2 264 70.8
FAN03G1741 Fragaria x ananassa HOM05D002510 ORTHO05D006928 6.2e-102 374.8 301 65.1
Ca_10569_v3 Cicer arietinum L. HOM05D002800 ORTHO05D008563 8.1e-102 374.4 225 78.2
MELO3C019798.2 Cucumis melo HOM05D002510 ORTHO05D006928 8.1e-102 374.4 237 75.5
FAN10G3768 Fragaria x ananassa HOM05D002510 ORTHO05D007210 1.1e-101 374.0 294 66.0
FAN06G0282 Fragaria x ananassa HOM05D002510 ORTHO05D006928 1.4e-101 373.6 290 66.2
PGR142G1169 Punica granatum HOM05D002510 ORTHO05D006928 3.1e-101 372.5 226 76.5
CsaV3_6G036450 Cucumis sativus L. HOM05D002510 ORTHO05D006928 4.0e-101 372.1 237 75.1
Sc20g0001820 Simmondsia chinensis HOM05D002510 ORTHO05D006928 4.0e-101 372.1 292 66.1
Lj1C913T4 Lonicera japonica HOM05D002510 ORTHO05D006928 5.3e-101 371.7 289 65.4
ClCG08G007520 Citrullus lanatus HOM05D002510 ORTHO05D006928 6.9e-101 371.3 237 75.1
FAN10G0968 Fragaria x ananassa HOM05D002510 ORTHO05D007210 6.9e-101 371.3 290 65.2
Lsat_1_v5_gn_2_112320 Lactuca sativa HOM05D002510 ORTHO05D006928 9.0e-101 370.9 247 73.7
Oeu031347.1 Olea europaea HOM05D002510 ORTHO05D006928 1.5e-100 370.2 237 75.1
Actinidia06769 Actinidia chinensis HOM05D002510 ORTHO05D006928 3.4e-100 369.0 297 66.3
CSS0017911 Camellia sinensis var. sinensis HOM05D002510 ORTHO05D006928 4.5e-100 368.6 221 80.1
Cc02_g11320 Coffea canephora HOM05D002510 ORTHO05D006928 4.5e-100 368.6 262 66.8
Lalb_Chr06g0162351 Lupinus albus HOM05D002510 ORTHO05D006928 5.8e-100 368.2 223 78.0
MSTRG.9172 Avicennia marina HOM05D002510 ORTHO05D006928 9.9e-100 367.5 262 67.9
Ciclev10032329m.g Citrus clementina HOM05D002510 ORTHO05D006928 1.7e-99 366.7 237 73.0
Nn2g10810 Nelumbo nucifera HOM05D002510 ORTHO05D006928 3.8e-99 365.5 222 77.0
Sed0007153 Sechium edule HOM05D002510 ORTHO05D006928 6.4e-99 364.8 241 73.0
EL10Ac3g05855 Beta vulgaris HOM05D002510 ORTHO05D006928 1.1e-98 364.0 288 63.2
TAR369G0428 Trochodendron aralioides HOM05D002510 ORTHO05D006928 1.4e-98 363.6 293 65.5
Potri.010G222900 Populus trichocarpa HOM05D002510 ORTHO05D006928 1.9e-98 363.2 241 73.0
AUR62037755 Chenopodium quinoa HOM05D002510 ORTHO05D006928 2.7e-97 359.4 260 69.2
Ah.10g032650 Amaranthus hybridus HOM05D002510 ORTHO05D006928 3.5e-97 359.0 248 70.6
Migut.F01984 Erythranthe guttata HOM05D002510 ORTHO05D006928 3.0e-96 355.9 256 66.0
AUR62018249 Chenopodium quinoa HOM05D002510 ORTHO05D006928 5.1e-96 355.1 305 62.6
Nitab4.5_0002524g0010 Nicotiana tabacum HOM05D002510 ORTHO05D006928 1.1e-95 354.0 286 62.6
Nitab4.5_0001053g0060 Nicotiana tabacum HOM05D002510 ORTHO05D006928 1.9e-95 353.2 286 61.5
PGSC0003DMG400033889 Solanum tuberosum HOM05D002510 ORTHO05D006928 2.5e-95 352.8 224 72.8
CAN.G131.8 Capsicum annuum HOM05D002510 ORTHO05D006928 3.3e-95 352.4 242 69.0
Sabra10G0172300 Salix brachista HOM05D002510 ORTHO05D006928 3.3e-95 352.4 228 74.1
Actinidia38854 Actinidia chinensis HOM05D002510 ORTHO05D006928 4.8e-94 348.6 225 73.8
PSO063G7611 Papaver somniferum HOM05D002510 ORTHO05D006928 1.8e-93 346.7 236 68.6
TAR623G0044 Trochodendron aralioides HOM05D002510 ORTHO05D006928 3.1e-93 345.9 294 62.6
CSS0041581 Camellia sinensis var. sinensis HOM05D002510 ORTHO05D006928 4.0e-93 345.5 291 60.1
CSS0006577 Camellia sinensis var. sinensis HOM05D002510 ORTHO05D006928 5.3e-93 345.1 291 60.1
PSO339G5277 Papaver somniferum HOM05D002510 ORTHO05D006928 9.0e-93 344.4 236 69.1
Glyma.02G074000 Glycine max HOM05D002510 ORTHO05D006928 2.2e-91 339.7 231 71.9
Aqoxy1G01228 Aquilegia oxysepala HOM05D002510 ORTHO05D006928 2.5e-90 336.3 241 66.0
Lj3g0006441 Lotus japonicus HOM05D002510 ORTHO05D006928 6.0e-89 331.6 221 71.5
Rhsim03G0120400 Rhododendron simsii HOM05D002510 ORTHO05D006928 8.7e-88 327.8 224 71.4
VMungo1197G0001 Vigna mungo HOM05D002510 ORTHO05D006928 3.3e-87 325.9 231 67.1
Phvul.004G083200 Phaseolus vulgaris HOM05D002510 ORTHO05D006928 1.6e-86 323.6 230 68.3
TPR.G1934 Trifolium pratense HOM05D002510 ORTHO05D006928 2.1e-86 323.2 255 63.9
Lalb_Chr03g0035921 Lupinus albus HOM05D002510 ORTHO05D006928 6.3e-86 321.6 232 67.2
SGA_v2.0_scaffold62G21410 Striga asiatica HOM05D002510 ORTHO05D006928 1.1e-85 320.9 243 65.4
Migut.F01753 Erythranthe guttata HOM05D002510 ORTHO05D006928 1.3e-83 313.9 236 64.8
vmacro04869 Vaccinium macrocarpon HOM05D002510 ORTHO05D006928 1.7e-83 313.5 223 66.4
HPP92_014717 Vanilla planifolia HOM05D002510 ORTHO05D006928 1.7e-83 313.5 220 66.4
ECA238G3090 Erigeron canadensis HOM05D002510 ORTHO05D006928 5.0e-83 312.0 227 66.1
ATR0048G011 Amborella trichopoda HOM05D002510 ORTHO05D006928 1.9e-82 310.1 241 58.9
arahy.Tifrunner.gnm1.ann1.DB5KD4 Arachis hypogaea HOM05D002510 ORTHO05D006928 4.2e-82 308.9 271 58.3
arahy.Tifrunner.gnm1.ann1.L5PTYD Arachis hypogaea HOM05D002510 ORTHO05D006928 1.6e-81 307.0 271 57.9
CDE04G1444 Ceratophyllum demersum HOM05D002510 ORTHO05D006928 3.0e-80 302.8 225 64.4
VMungo0464G1224 Vigna mungo HOM05D002510 ORTHO05D006928 3.9e-80 302.4 235 63.4
SalBow4G2249 Salvia bowleyana HOM05D002510 ORTHO05D006928 6.7e-80 301.6 240 60.4
Cpa.g.sc53.85 Carica papaya HOM05D002510 ORTHO05D006928 8.7e-80 301.2 177 80.8
Os02g0806000 Oryza sativa ssp. japonica HOM05D002510 ORTHO05D006928 4.3e-79 298.9 231 60.6
Lj3g0019343 Lotus japonicus HOM05D002510 ORTHO05D006928 1.3e-78 297.4 233 63.5
Gohir.D10G213900 Gossypium hirsutum HOM05D002510 ORTHO05D006928 6.5e-75 285.0 170 78.8
Atru.chr12.782 Acer truncatum HOM05D002510 ORTHO05D006928 1.4e-74 283.9 177 77.4
unitig_88.g27817 Utricularia gibba HOM05D002510 ORTHO05D006928 4.6e-73 278.9 259 56.0
Dinv36437 Davidia involucrata HOM05D002510 ORTHO05D006928 1.0e-72 277.7 244 63.1
Peaxi162Scf01719g00013 Petunia axillaris HOM05D002510 ORTHO05D006928 2.3e-72 276.6 225 59.6
SEGI_15474 Sequoiadendron giganteum HOM05D002510 ORTHO05D006928 4.3e-71 272.3 223 57.8
Aa31LG5G20680 Aethionema arabicum HOM05D002510 ORTHO05D006928 8.2e-70 268.1 197 72.6
Gohir.A10G205500 Gossypium hirsutum HOM05D002510 ORTHO05D006928 5.3e-69 265.4 167 76.6
SalBow3G0053 Salvia bowleyana HOM05D002510 ORTHO05D006928 2.5e-66 256.5 165 73.9
Oeu014386.1 Olea europaea HOM05D002510 ORTHO05D006928 8.2e-62 241.5 164 70.1
CDE06G2540 Ceratophyllum demersum HOM05D002510 ORTHO05D006928 2.6e-55 219.9 154 67.5
CAN.G790.5 Capsicum annuum HOM05D002510 ORTHO05D006928 5.9e-52 208.8 135 68.9
vmacro07070 Vaccinium macrocarpon HOM05D002510 ORTHO05D006928 5.5e-50 202.2 132 74.2
Mapoly0033s0159 Marchantia polymorpha HOM05D002510 ORTHO05D006928 1.6e-49 200.7 211 48.3
Sopen04g011630 Solanum pennellii HOM05D002510 ORTHO05D006928 8.3e-46 188.3 134 64.9
Solyc04g025240.2 Solanum lycopersicum HOM05D002510 ORTHO05D006928 2.0e-44 183.7 134 63.4
SMO134G0014 Selaginella moellendorffii HOM05D002510 ORTHO05D006928 2.9e-43 179.9 205 45.9
Zm00001eb172140 Zea mays HOM05D002510 ORTHO05D006928 5.0e-43 179.1 133 65.4
Glyma.16G155400 Glycine max HOM05D002510 ORTHO05D006928 4.7e-41 172.6 175 54.3
Lj2g0015916 Lotus japonicus HOM05D002510 ORTHO05D006928 4.4e-39 166.0 207 49.8
Solyc04g025230.1 Solanum lycopersicum HOM05D002510 ORTHO05D006928 3.7e-30 136.3 91 69.2
Haze_18780 Corylus avellana HOM05D000278 ORTHO05D005754 1.0e-27 128.3 131 55.0
Ciclev10024578m.g Citrus clementina HOM05D002510 ORTHO05D006928 4.4e-23 112.8 90 60.0
Nn3g20716 Nelumbo nucifera HOM05D002510 ORTHO05D006928 1.4e-21 107.8 133 48.9
A03p21800 Brassica napus HOM05D002510 ORTHO05D006928 6.0e-20 102.4 121 47.1
AagrBONN_evm.TU.Sc2ySwM_117.96 Anthoceros agrestis HOM05D000001 ORTHO05D000003 3.9e-19 99.8 127 45.7
Actinidia32448 Actinidia chinensis HOM05D002510 ORTHO05D006928 3.6e-17 93.2 82 57.3
Cre16.g662650 Chlamydomonas reinhardtii HOM05D002510 ORTHO05D006928 1.7e-14 84.3 119 37.0
PRCOL_00005349 Prasinoderma coloniale HOM05D002510 ORTHO05D006928 1.6e-09 67.8 77 48.1
Actinidia37356 Actinidia chinensis HOM05D002510 ORTHO05D006928 3.4e-07 60.1 67 50.7
MCO13G231 Micromonas commoda HOM05D005733 ORTHO05D006928 1.3e-06 58.2 87 32.2
Sopen05g021320 Solanum pennellii HOM05D004023 ORTHO05D004681 1.3e-06 58.2 136 30.9
AagrBONN_evm.TU.Sc2ySwM_117.2238 Anthoceros agrestis HOM05D004023 ORTHO05D004681 3.8e-06 56.6 63 42.9


User provided reference genes

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