Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10016002m.g Eutrema salsugineum HOM05D005503 ORTHO05D008949 7.4e-59 230.3 116 100.0
A10p32120 Brassica napus HOM05D005503 ORTHO05D008949 1.0e-47 193.4 111 87.4
BraA10t45255Z Brassica rapa HOM05D005503 ORTHO05D008949 1.0e-47 193.4 111 87.4
Sp6g38760 Schrenkiella parvula HOM05D005503 ORTHO05D008949 1.7e-47 192.6 118 84.7
AT5G04000 Arabidopsis thaliana HOM05D005503 ORTHO05D008949 2.5e-46 188.7 115 84.3
C09p72840 Brassica napus HOM05D005503 ORTHO05D008949 5.5e-46 187.6 111 84.7
BolC9t60020H Brassica oleracea HOM05D005503 ORTHO05D008949 2.1e-45 185.7 109 84.4
Carub.0006s0293 Capsella rubella HOM05D005503 ORTHO05D008949 1.8e-44 182.6 122 85.2
AL6G13590 Arabidopsis lyrata HOM05D005503 ORTHO05D008949 3.7e-42 174.9 116 79.3
BcaC06g32102 Brassica carinata HOM05D005503 ORTHO05D008949 3.1e-41 171.8 112 82.1
CARHR209280 Cardamine hirsuta HOM05D005503 ORTHO05D008949 1.1e-38 163.3 119 79.0
Aa31LG1G21320 Aethionema arabicum HOM05D005503 ORTHO05D008949 1.1e-35 153.3 130 65.4
THA.LOC104816402 Tarenaya hassleriana HOM05D005503 ORTHO05D008949 6.7e-28 127.5 109 67.9
Medtr7g090930 Medicago truncatula HOM05D005503 ORTHO05D008949 2.2e-23 112.5 93 65.6
Phvul.001G128900 Phaseolus vulgaris HOM05D005503 ORTHO05D008949 2.2e-23 112.5 105 61.9
Dinv39668 Davidia involucrata HOM05D005503 ORTHO05D008949 1.9e-22 109.4 111 55.9
FvH4_6g24610 Fragaria vesca HOM05D005503 ORTHO05D008949 2.5e-22 109.0 67 79.1
FAN02G3508 Fragaria x ananassa HOM05D005503 ORTHO05D008949 2.5e-22 109.0 67 79.1
FAN14G5504 Fragaria x ananassa HOM05D005503 ORTHO05D008949 2.5e-22 109.0 67 79.1
Glyma.03G133400 Glycine max HOM05D005503 ORTHO05D008949 2.5e-22 109.0 63 82.5
Glyma.19G135200 Glycine max HOM05D005503 ORTHO05D008949 2.5e-22 109.0 63 82.5
Psat3g074800 Pisum sativum HOM05D005503 ORTHO05D008949 2.5e-22 109.0 63 82.5
VMungo1383G2568 Vigna mungo HOM05D005503 ORTHO05D008949 2.5e-22 109.0 63 82.5
ECA247G0412 Erigeron canadensis HOM05D005503 ORTHO05D008949 3.2e-22 108.6 110 52.7
Rhsim03G0032200 Rhododendron simsii HOM05D005503 ORTHO05D008949 3.2e-22 108.6 111 53.2
TPR.G7098 Trifolium pratense HOM05D005503 ORTHO05D008949 3.2e-22 108.6 105 59.0
Aqoxy2G00233 Aquilegia oxysepala HOM05D005503 ORTHO05D008949 4.2e-22 108.2 125 47.2
MELO3C009814.2 Cucumis melo HOM05D005503 ORTHO05D008949 5.5e-22 107.8 78 67.9
FAN05G5816 Fragaria x ananassa HOM05D005503 ORTHO05D008949 5.5e-22 107.8 67 79.1
Gohir.A09G120500 Gossypium hirsutum HOM05D005503 ORTHO05D008949 5.5e-22 107.8 63 79.4
Gohir.D09G116600 Gossypium hirsutum HOM05D005503 ORTHO05D008949 5.5e-22 107.8 63 79.4
Gorai.006G134900 Gossypium raimondii HOM05D005503 ORTHO05D008949 5.5e-22 107.8 63 79.4
Lj1g0008024 Lotus japonicus HOM05D005503 ORTHO05D008949 5.5e-22 107.8 63 81.0
GSVIVG01005042001 Vitis vinifera HOM05D005503 ORTHO05D008949 5.5e-22 107.8 63 81.0
Lsat_1_v5_gn_9_32141 Lactuca sativa HOM05D005503 ORTHO05D008949 7.2e-22 107.5 103 56.3
vmacro21945 Vaccinium macrocarpon HOM05D005503 ORTHO05D008949 7.2e-22 107.5 81 63.0
Duzib093G0766 Durio zibethinus HOM05D005503 ORTHO05D008949 9.4e-22 107.1 63 84.1
RcHm_v2.0_Chr3g0483941 Rosa chinensis HOM05D005503 ORTHO05D008949 9.4e-22 107.1 118 52.5
Thecc.05G146600 Theobroma cacao HOM05D005503 ORTHO05D008949 9.4e-22 107.1 63 81.0
CSS0039750 Camellia sinensis var. sinensis HOM05D005503 ORTHO05D008949 1.2e-21 106.7 115 53.0
Lalb_Chr20g0115621 Lupinus albus HOM05D005503 ORTHO05D008949 1.2e-21 106.7 63 81.0
CiPaw.10G036000 Carya illinoinensis HOM05D005503 ORTHO05D008949 1.6e-21 106.3 106 55.7
Potri.006G047800 Populus trichocarpa HOM05D005503 ORTHO05D008949 1.6e-21 106.3 67 74.6
arahy.Tifrunner.gnm1.ann1.Z9GIA8 Arachis hypogaea HOM05D005503 ORTHO05D008949 2.1e-21 105.9 93 62.4
CsaV3_3G040800 Cucumis sativus L. HOM05D005503 ORTHO05D008949 2.1e-21 105.9 78 65.4
ClCG10G015610 Citrullus lanatus HOM05D005503 ORTHO05D008949 2.7e-21 105.5 63 76.2
ATR0721G098 Amborella trichopoda HOM05D005503 ORTHO05D008949 3.6e-21 105.1 90 61.1
COL.COLO4_36524 Corchorus olitorius HOM05D005503 ORTHO05D008949 3.6e-21 105.1 63 77.8
Hma1.2p1_0110F.1_g052960 Hydrangea macrophylla HOM05D005503 ORTHO05D008949 3.6e-21 105.1 109 55.0
Lalb_Chr20g0110371 Lupinus albus HOM05D005503 ORTHO05D008949 3.6e-21 105.1 63 79.4
Ciclev10006881m.g Citrus clementina HOM05D005503 ORTHO05D008949 4.7e-21 104.8 107 54.2
Nn2g15105 Nelumbo nucifera HOM05D005503 ORTHO05D008949 4.7e-21 104.8 63 79.4
arahy.Tifrunner.gnm1.ann1.BJA8E7 Arachis hypogaea HOM05D005503 ORTHO05D008949 8.0e-21 104.0 93 62.4
MBI13_g26145_MAGBIO Magnolia biondii HOM05D005503 ORTHO05D008949 8.0e-21 104.0 69 71.0
FAN09G2222 Fragaria x ananassa HOM05D005503 ORTHO05D008949 1.4e-20 103.2 67 76.1
Sabra06G0033300 Salix brachista HOM05D005503 ORTHO05D008949 1.4e-20 103.2 67 73.1
TAR636G0173 Trochodendron aralioides HOM05D005503 ORTHO05D008949 1.4e-20 103.2 82 65.9
Actinidia39197 Actinidia chinensis HOM05D005503 ORTHO05D008949 1.8e-20 102.8 63 76.2
PGR004G2205 Punica granatum HOM05D005503 ORTHO05D008949 1.8e-20 102.8 69 69.6
EL10Ac3g07150 Beta vulgaris HOM05D005503 ORTHO05D008949 3.0e-20 102.1 76 63.2
MD12G1083400 Malus domestica HOM05D005503 ORTHO05D008949 3.0e-20 102.1 62 77.4
Manes.09G011000 Manihot esculenta HOM05D005503 ORTHO05D008949 3.0e-20 102.1 109 56.0
Ca_22958_v3 Cicer arietinum L. HOM05D005503 ORTHO05D008949 4.0e-20 101.7 95 60.0
Prupe.7G052400 Prunus persica HOM05D005503 ORTHO05D008949 4.0e-20 101.7 87 60.9
Cpa.g.sc1079.1 Carica papaya HOM05D005503 ORTHO05D008949 5.2e-20 101.3 109 55.0
Hund24647 Selenicereus undatus HOM05D005503 ORTHO05D008949 8.8e-20 100.5 65 72.3
Cc06_g18190 Coffea canephora HOM05D005503 ORTHO05D008949 1.5e-19 99.8 93 60.2
Atru.chr1.1203 Acer truncatum HOM05D005503 ORTHO05D008949 2.0e-19 99.4 115 50.4
HanXRQChr10g0298211 Helianthus annuus HOM05D005503 ORTHO05D008949 2.6e-19 99.0 66 75.8
Oeu006918.1 Olea europaea HOM05D005503 ORTHO05D008949 2.6e-19 99.0 63 73.0
TWI77G0247 Tripterygium wilfordii HOM05D005503 ORTHO05D008949 2.6e-19 99.0 86 62.8
QL07p004035 Quercus lobata HOM05D005503 ORTHO05D008949 3.4e-19 98.6 124 46.8
Potri.016G044001 Populus trichocarpa HOM05D005503 ORTHO05D008949 4.4e-19 98.2 67 71.6
Duzib128G0213 Durio zibethinus HOM05D005503 ORTHO05D008949 5.7e-19 97.8 66 69.7
Oeu033023.1 Olea europaea HOM05D005503 ORTHO05D008949 5.7e-19 97.8 81 61.7
Sed0013086 Sechium edule HOM05D005503 ORTHO05D008949 5.7e-19 97.8 97 56.7
DCAR_020514 Daucus carota HOM05D005503 ORTHO05D008949 7.5e-19 97.4 65 66.2
Ah.13g077080 Amaranthus hybridus HOM05D005503 ORTHO05D008949 1.3e-18 96.7 70 65.7
Haze_19781 Corylus avellana HOM05D005503 ORTHO05D008949 1.3e-18 96.7 110 50.9
HPP92_027974 Vanilla planifolia HOM05D005503 ORTHO05D008949 1.3e-18 96.7 63 68.3
CANSAT80G2315 Cannabis sativa HOM05D005503 ORTHO05D008949 2.8e-18 95.5 63 76.2
Eucgr.A02305 Eucalyptus grandis HOM05D005503 ORTHO05D008949 3.7e-18 95.1 114 52.6
Sc13g0001540 Simmondsia chinensis HOM05D005503 ORTHO05D008949 3.7e-18 95.1 63 73.0
AUR62024521 Chenopodium quinoa HOM05D005503 ORTHO05D008949 1.1e-17 93.6 62 69.4
Nitab4.5_0001618g0220 Nicotiana tabacum HOM05D005503 ORTHO05D008949 1.4e-17 93.2 92 53.3
Os05g0496000 Oryza sativa ssp. japonica HOM05D005503 ORTHO05D008949 1.8e-17 92.8 63 71.4
Sopen04g008520 Solanum pennellii HOM05D005503 ORTHO05D008949 1.8e-17 92.8 67 64.2
Dinv18679 Davidia involucrata HOM05D005503 ORTHO05D008949 2.4e-17 92.4 65 67.7
SalBow6G3706 Salvia bowleyana HOM05D005503 ORTHO05D008949 2.4e-17 92.4 70 64.3
SalBow6G4155 Salvia bowleyana HOM05D005503 ORTHO05D008949 2.4e-17 92.4 70 64.3
PGSC0003DMG400012701 Solanum tuberosum HOM05D005503 ORTHO05D008949 2.4e-17 92.4 87 52.9
Migut.J01714 Erythranthe guttata HOM05D005503 ORTHO05D008949 4.1e-17 91.7 77 54.5
Solyc04g016420.3 Solanum lycopersicum HOM05D005503 ORTHO05D008949 5.3e-17 91.3 87 51.7
Ah.04g151390 Amaranthus hybridus HOM05D005503 ORTHO05D008949 7.0e-17 90.9 62 67.7
CAN.G1237.11 Capsicum annuum HOM05D005503 ORTHO05D008949 9.1e-17 90.5 91 49.5
Peaxi162Scf00130g00911 Petunia axillaris HOM05D005503 ORTHO05D008949 9.1e-17 90.5 63 65.1
SGA_v2.0_scaffold69G23127 Striga asiatica HOM05D005503 ORTHO05D008949 9.1e-17 90.5 67 65.7
Zm00001eb291660 Zea mays HOM05D005503 ORTHO05D008949 3.5e-16 88.6 64 68.8
Nitab4.5_0000826g0100 Nicotiana tabacum HOM05D005503 ORTHO05D008949 4.5e-16 88.2 108 46.3
DCAR_013615 Daucus carota HOM05D005503 ORTHO05D008949 7.7e-16 87.4 58 69.0
CDE09G0956 Ceratophyllum demersum HOM05D003424 ORTHO05D004025 2.9e-15 85.5 68 61.8
unitig_22.g6053 Utricularia gibba HOM05D005503 ORTHO05D008949 1.9e-14 82.8 69 58.0
PSO063G5603 Papaver somniferum HOM05D005503 ORTHO05D008949 9.4e-14 80.5 96 50.0
Mapoly0048s0063 Marchantia polymorpha HOM05D005503 ORTHO05D008949 1.8e-12 76.3 104 43.3
HPP92_018218 Vanilla planifolia HOM05D005503 ORTHO05D008949 8.8e-12 73.9 97 45.4
vmacro21963 Vaccinium macrocarpon HOM05D005503 ORTHO05D008949 7.5e-11 70.9 50 70.0
Hma1.2p1_0005F.1_g004410 Hydrangea macrophylla HOM05D005503 ORTHO05D008949 3.7e-10 68.6 67 55.2
Rhsim04G0037200 Rhododendron simsii HOM05D005503 ORTHO05D008949 1.5e-06 56.6 50 58.0
Rhsim04G0170300 Rhododendron simsii HOM05D005503 ORTHO05D008949 1.5e-06 56.6 50 58.0


User provided reference genes

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