Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10015886m.g Eutrema salsugineum HOM05D009160 ORTHO05D009596 1.1e-62 243.0 117 100.0
BolC3t13454H Brassica oleracea HOM05D009160 ORTHO05D009596 4.1e-33 144.8 127 61.4
BcaB01g05200 Brassica carinata HOM05D009160 ORTHO05D009596 3.5e-32 141.7 127 59.1
BolC3t13461H Brassica oleracea HOM05D009160 ORTHO05D009596 3.5e-32 141.7 127 59.1
C03p09710 Brassica napus HOM05D009160 ORTHO05D009596 5.9e-32 141.0 127 59.1
BcaB01g05193 Brassica carinata HOM05D009160 ORTHO05D009596 1.3e-31 139.8 127 58.3
C03p09670 Brassica napus HOM05D009160 ORTHO05D009596 1.3e-31 139.8 127 58.3
BolC3t13455H Brassica oleracea HOM05D009160 ORTHO05D009596 1.3e-31 139.8 127 58.3
C03p09660 Brassica napus HOM05D009160 ORTHO05D009596 3.8e-31 138.3 127 57.5
BcaB01g04930 Brassica carinata HOM05D009160 ORTHO05D009596 8.6e-31 137.1 127 57.5
BcaB01g04931 Brassica carinata HOM05D009160 ORTHO05D009596 8.6e-31 137.1 127 57.5
BcaB01g04929 Brassica carinata HOM05D009160 ORTHO05D009596 1.1e-30 136.7 127 58.3
C03p09690 Brassica napus HOM05D009160 ORTHO05D009596 1.1e-30 136.7 127 57.5
BcaB01g05201 Brassica carinata HOM05D009160 ORTHO05D009596 1.5e-30 136.3 127 57.5
BolC3t13462H Brassica oleracea HOM05D009160 ORTHO05D009596 1.5e-30 136.3 127 57.5
BcaB01g04928 Brassica carinata HOM05D009160 ORTHO05D009596 2.5e-30 135.6 127 57.5
BolC3t13456H Brassica oleracea HOM05D009160 ORTHO05D009596 2.5e-30 135.6 120 57.5
BraA03t10152Z Brassica rapa HOM05D009160 ORTHO05D009596 2.5e-30 135.6 127 55.9
A03p08300 Brassica napus HOM05D009160 ORTHO05D009596 3.3e-30 135.2 127 56.7
BcaB01g04927 Brassica carinata HOM05D009160 ORTHO05D009596 5.6e-30 134.4 127 56.7
C03p09720 Brassica napus HOM05D009160 ORTHO05D009596 7.3e-30 134.0 127 56.7
BraA03t10149Z Brassica rapa HOM05D009160 ORTHO05D009596 7.3e-30 134.0 131 55.7
A03p08340 Brassica napus HOM05D009160 ORTHO05D009596 2.1e-29 132.5 120 56.7
BcaB01g05195 Brassica carinata HOM05D009160 ORTHO05D009596 4.7e-29 131.3 120 55.8
BcaB01g04933 Brassica carinata HOM05D009160 ORTHO05D009596 2.3e-28 129.0 127 55.1
C03p09680 Brassica napus HOM05D009160 ORTHO05D009596 3.0e-28 128.6 120 55.0
BolC3t13458H Brassica oleracea HOM05D009160 ORTHO05D009596 4.0e-28 128.3 127 55.9
A03p08310 Brassica napus HOM05D009160 ORTHO05D009596 6.8e-28 127.5 120 54.2
BraA03t10150Z Brassica rapa HOM05D009160 ORTHO05D009596 4.4e-27 124.8 120 53.3
SpUn0004_0070 Schrenkiella parvula HOM05D009160 ORTHO05D009596 9.2e-25 117.1 131 48.9
SpUn0066_0020 Schrenkiella parvula HOM05D009160 ORTHO05D009596 9.2e-25 117.1 131 48.9
A03p08320 Brassica napus HOM05D009160 ORTHO05D009596 7.8e-24 114.0 112 52.7
Sp6g26890 Schrenkiella parvula HOM05D009160 ORTHO05D009596 2.8e-21 105.5 134 46.3
Thhalv10015780m.g Eutrema salsugineum HOM05D009160 ORTHO05D009596 1.1e-17 93.6 132 46.2
Thhalv10014860m.g Eutrema salsugineum HOM05D009029 ORTHO05D009596 2.8e-13 79.0 169 34.3
C09p59860 Brassica napus HOM05D009029 ORTHO05D009596 4.7e-13 78.2 152 36.8
Carub.0006s1555 Capsella rubella HOM05D009029 ORTHO05D009596 4.7e-13 78.2 164 37.2
CARHR195870 Cardamine hirsuta HOM05D009029 ORTHO05D009596 8.1e-13 77.4 166 36.7
BolC1t01146H Brassica oleracea HOM05D009029 ORTHO05D009596 1.8e-12 76.3 152 36.8
BcaB01g04926 Brassica carinata HOM05D009160 ORTHO05D009596 2.3e-12 75.9 76 51.3
A10p22070 Brassica napus HOM05D009029 ORTHO05D009596 3.1e-12 75.5 152 36.2
C09p59840 Brassica napus HOM05D009029 ORTHO05D009596 3.1e-12 75.5 151 36.4
BcaC09g51570 Brassica carinata HOM05D009029 ORTHO05D009596 6.8e-12 74.3 149 36.2
BcaB08g36782 Brassica carinata HOM05D009029 ORTHO05D009596 8.9e-12 73.9 149 36.9
BcaB08g36781 Brassica carinata HOM05D009029 ORTHO05D009596 2.6e-11 72.4 166 35.5
BcaC04g18803 Brassica carinata HOM05D009029 ORTHO05D009596 2.6e-11 72.4 151 37.1
BraA02t05377Z Brassica rapa HOM05D009029 ORTHO05D009596 3.4e-11 72.0 167 33.5
AL6G28410 Arabidopsis lyrata HOM05D009029 ORTHO05D009596 4.4e-11 71.6 161 35.4
BcaC03g18552 Brassica carinata HOM05D009029 ORTHO05D009596 7.5e-11 70.9 167 33.5
A02p04140 Brassica napus HOM05D009029 ORTHO05D009596 7.5e-11 70.9 167 33.5
C02p08990 Brassica napus HOM05D009029 ORTHO05D009596 7.5e-11 70.9 167 33.5
BolC2t06808H Brassica oleracea HOM05D009029 ORTHO05D009596 7.5e-11 70.9 167 33.5
AT5G17340 Arabidopsis thaliana HOM05D009029 ORTHO05D009596 1.3e-10 70.1 161 34.8
BraA10t44266Z Brassica rapa HOM05D009029 ORTHO05D009596 4.9e-10 68.2 149 34.9
Sp6g26880 Schrenkiella parvula HOM05D009029 ORTHO05D009596 1.1e-09 67.0 88 40.9
BolC9t58822H Brassica oleracea HOM05D009029 ORTHO05D009596 2.4e-09 65.9 137 35.0
BcaB05g23261 Brassica carinata HOM05D009029 ORTHO05D009596 7.1e-09 64.3 165 32.7
BraA10t44265Z Brassica rapa HOM05D009029 ORTHO05D009596 2.7e-08 62.4 80 42.5
CARHR195880 Cardamine hirsuta HOM05D009029 ORTHO05D009596 6.0e-08 61.2 88 43.2
C09p59800 Brassica napus HOM05D009029 ORTHO05D009596 2.3e-07 59.3 151 29.8
BcaC04g18801 Brassica carinata HOM05D009029 ORTHO05D009596 5.6e-06 54.7 98 36.7


User provided reference genes

Program Settings