Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10015865m.g Eutrema salsugineum HOM05D001867 ORTHO05D001708 1.3e-49 199.5 104 100.0
Sp4g27180 Schrenkiella parvula HOM05D001867 ORTHO05D001708 3.0e-27 125.2 90 71.1
Thhalv10001538m.g Eutrema salsugineum HOM05D001867 ORTHO05D001708 3.9e-27 124.8 87 75.9
Carub.0004s2771 Capsella rubella HOM05D001867 ORTHO05D001708 5.7e-26 120.9 105 66.7
AT2G45120 Arabidopsis thaliana HOM05D001867 ORTHO05D001708 1.3e-25 119.8 89 70.8
AL4G44210 Arabidopsis lyrata HOM05D001867 ORTHO05D001708 3.1e-24 115.2 89 68.5
CARHR140350 Cardamine hirsuta HOM05D001867 ORTHO05D001708 3.9e-19 98.2 91 64.8
C03p29860 Brassica napus HOM05D001867 ORTHO05D001708 1.1e-16 90.1 91 60.4
BcaB01g03294 Brassica carinata HOM05D001867 ORTHO05D001708 5.3e-16 87.8 74 59.5
BcaC01g05158 Brassica carinata HOM05D001867 ORTHO05D001708 6.9e-16 87.4 75 62.7
BolC3t15333H Brassica oleracea HOM05D001867 ORTHO05D001708 6.9e-16 87.4 75 62.7
A03p25020 Brassica napus HOM05D001867 ORTHO05D001708 7.7e-15 84.0 76 60.5
BraA03t11705Z Brassica rapa HOM05D001867 ORTHO05D001708 7.7e-15 84.0 76 60.5
C09p45060 Brassica napus HOM05D001867 ORTHO05D001708 2.7e-12 75.5 72 61.1
AT3G60580 Arabidopsis thaliana HOM05D001867 ORTHO05D001708 3.9e-11 71.6 91 53.8
AL5G42890 Arabidopsis lyrata HOM05D001867 ORTHO05D001708 5.1e-11 71.2 96 50.0
BcaC08g45077 Brassica carinata HOM05D001867 ORTHO05D001708 8.8e-11 70.5 118 46.6
C06p26860 Brassica napus HOM05D001867 ORTHO05D001708 8.8e-11 70.5 118 46.6
BolC6t37860H Brassica oleracea HOM05D001867 ORTHO05D001708 8.8e-11 70.5 118 46.6
BcaC07g40579 Brassica carinata HOM05D001867 ORTHO05D001708 1.5e-10 69.7 91 50.5
Carub.0005s2730 Capsella rubella HOM05D001867 ORTHO05D001708 1.5e-10 69.7 87 55.2
A04p33630 Brassica napus HOM05D001867 ORTHO05D001708 2.0e-10 69.3 80 52.5
BraA04t18827Z Brassica rapa HOM05D001867 ORTHO05D001708 2.0e-10 69.3 80 52.5
Thhalv10006508m.g Eutrema salsugineum HOM05D001867 ORTHO05D001708 2.0e-10 69.3 111 44.1
BcaC02g10160 Brassica carinata HOM05D001867 ORTHO05D001708 2.5e-10 68.9 95 50.5
C04p32080 Brassica napus HOM05D001867 ORTHO05D001708 2.5e-10 68.9 95 50.5
BolC4t24761H Brassica oleracea HOM05D001867 ORTHO05D001708 2.5e-10 68.9 95 50.5
C04p71390 Brassica napus HOM05D001867 ORTHO05D001708 3.3e-10 68.6 73 56.2
TWI23G0083 Tripterygium wilfordii HOM05D001867 ORTHO05D001708 4.3e-10 68.2 120 46.7
BolC4t28646H Brassica oleracea HOM05D001867 ORTHO05D001708 5.7e-10 67.8 71 56.3
A09p52800 Brassica napus HOM05D001867 ORTHO05D001708 9.7e-10 67.0 98 51.0
CARHR170970 Cardamine hirsuta HOM05D001867 ORTHO05D001708 9.7e-10 67.0 101 48.5
BraA09t40712Z Brassica rapa HOM05D001867 ORTHO05D001708 1.7e-09 66.2 98 51.0
FAN10G2581 Fragaria x ananassa HOM05D001867 ORTHO05D001708 2.2e-09 65.9 108 43.5
TWI14G1211 Tripterygium wilfordii HOM05D001867 ORTHO05D001708 2.2e-09 65.9 115 48.7
TWI59G0547 Tripterygium wilfordii HOM05D001867 ORTHO05D001708 2.8e-09 65.5 123 46.3
THA.LOC104817599 Tarenaya hassleriana HOM05D001867 ORTHO05D001708 4.8e-09 64.7 82 52.4
CSS0027051 Camellia sinensis var. sinensis HOM05D001867 ORTHO05D001708 8.2e-09 63.9 86 51.2
Manes.02G039900 Manihot esculenta HOM05D001867 ORTHO05D001708 8.2e-09 63.9 110 44.5
BcaB02g08164 Brassica carinata HOM05D001867 ORTHO05D001708 1.1e-08 63.5 99 49.5
FAN06G0704 Fragaria x ananassa HOM05D001867 ORTHO05D001708 1.1e-08 63.5 108 42.6
FAN06G3486 Fragaria x ananassa HOM05D001867 ORTHO05D001708 1.1e-08 63.5 108 42.6
CiPaw.14G025100 Carya illinoinensis HOM05D001867 ORTHO05D001708 1.4e-08 63.2 106 48.1
Medtr0160s0030 Medicago truncatula HOM05D001867 ORTHO05D001708 1.4e-08 63.2 85 47.1
Ciclev10020499m.g Citrus clementina HOM05D001867 ORTHO05D001708 1.8e-08 62.8 74 55.4
FAN01G2176 Fragaria x ananassa HOM05D001867 ORTHO05D001708 1.8e-08 62.8 108 42.6
FAN10G0443 Fragaria x ananassa HOM05D001867 ORTHO05D001708 1.8e-08 62.8 110 40.9
TPR.G39156 Trifolium pratense HOM05D001867 ORTHO05D001708 1.8e-08 62.8 85 44.7
Aa31LG1G26680 Aethionema arabicum HOM05D001867 ORTHO05D001708 2.4e-08 62.4 93 47.3
Lj1g0010457 Lotus japonicus HOM05D001867 ORTHO05D001708 3.1e-08 62.0 117 41.0
Prupe.2G136700 Prunus persica HOM05D001867 ORTHO05D001708 3.1e-08 62.0 107 44.9
Actinidia12181 Actinidia chinensis HOM05D001867 ORTHO05D001708 4.1e-08 61.6 102 45.1
A07p25170 Brassica napus HOM05D001867 ORTHO05D001708 4.1e-08 61.6 96 45.8
BraA07t30159Z Brassica rapa HOM05D001867 ORTHO05D001708 4.1e-08 61.6 96 45.8
FvH4_7g10990 Fragaria vesca HOM05D001867 ORTHO05D001708 4.1e-08 61.6 108 41.7
Duzib205G1684 Durio zibethinus HOM05D001867 ORTHO05D001708 5.3e-08 61.2 105 44.8
CiPaw.13G031900 Carya illinoinensis HOM05D001867 ORTHO05D001708 9.1e-08 60.5 88 50.0
FAN03G2065 Fragaria x ananassa HOM05D001867 ORTHO05D001708 9.1e-08 60.5 106 41.5
Nitab4.5_0001076g0050 Nicotiana tabacum HOM05D001867 ORTHO05D001708 1.5e-07 59.7 74 50.0
Nitab4.5_0000618g0040 Nicotiana tabacum HOM05D001867 ORTHO05D001708 2.0e-07 59.3 74 48.6
Duzib138G0074 Durio zibethinus HOM05D001867 ORTHO05D001708 2.6e-07 58.9 105 42.9
Manes.01G081000 Manihot esculenta HOM05D001867 ORTHO05D001708 2.6e-07 58.9 110 43.6
Thecc.03G250600 Theobroma cacao HOM05D001867 ORTHO05D001708 2.6e-07 58.9 90 45.6
Actinidia12676 Actinidia chinensis HOM05D001867 ORTHO05D001708 3.4e-07 58.5 118 39.8
A04p01570 Brassica napus HOM05D001867 ORTHO05D001708 3.4e-07 58.5 62 59.7
C08p35530 Brassica napus HOM05D001867 ORTHO05D001708 3.4e-07 58.5 95 47.4
BolC8t51145H Brassica oleracea HOM05D001867 ORTHO05D001708 3.4e-07 58.5 95 47.4
BraA04t15878Z Brassica rapa HOM05D001867 ORTHO05D001708 3.4e-07 58.5 62 59.7
Cpa.g.sc29.163 Carica papaya HOM05D001867 ORTHO05D001708 3.4e-07 58.5 90 45.6
Dinv43665 Davidia involucrata HOM05D001867 ORTHO05D001708 3.4e-07 58.5 108 41.7
Actinidia33483 Actinidia chinensis HOM05D001867 ORTHO05D001708 5.9e-07 57.8 103 42.7
RcHm_v2.0_Chr1g0348921 Rosa chinensis HOM05D001867 ORTHO05D001708 5.9e-07 57.8 128 39.1
Thecc.01G384600 Theobroma cacao HOM05D001867 ORTHO05D001708 5.9e-07 57.8 94 44.7
Duzib084G0597 Durio zibethinus HOM05D001867 ORTHO05D001708 7.7e-07 57.4 110 40.9
Gohir.D12G097800 Gossypium hirsutum HOM05D001867 ORTHO05D001708 7.7e-07 57.4 75 52.0
Gorai.008G106500 Gossypium raimondii HOM05D001867 ORTHO05D001708 7.7e-07 57.4 75 52.0
Manes.05G049500 Manihot esculenta HOM05D001867 ORTHO05D001708 7.7e-07 57.4 101 43.6
Dinv39150 Davidia involucrata HOM05D001867 ORTHO05D001708 1.0e-06 57.0 88 46.6
FvH4_5g19030 Fragaria vesca HOM05D001867 ORTHO05D001708 1.3e-06 56.6 72 50.0
Hma1.2p1_1172F.1_g263650 Hydrangea macrophylla HOM05D001867 ORTHO05D001708 1.3e-06 56.6 98 42.9
QL12p012068 Quercus lobata HOM05D001867 ORTHO05D001708 1.3e-06 56.6 123 41.5
Ciclev10021224m.g Citrus clementina HOM05D001867 ORTHO05D001708 1.7e-06 56.2 104 42.3
PGR004G0910 Punica granatum HOM05D001867 ORTHO05D001708 1.7e-06 56.2 112 42.0
Hma1.2p1_0316F.1_g123130 Hydrangea macrophylla HOM05D001867 ORTHO05D001708 2.2e-06 55.8 78 46.2
Atru.chr9.1307 Acer truncatum HOM05D001867 ORTHO05D001708 2.9e-06 55.5 103 41.7
Cpa.g.sc2070.1 Carica papaya HOM05D001867 ORTHO05D001708 2.9e-06 55.5 86 52.3
FAN04G1302 Fragaria x ananassa HOM05D001867 ORTHO05D001708 2.9e-06 55.5 72 48.6
FAN08G0309 Fragaria x ananassa HOM05D001867 ORTHO05D001708 2.9e-06 55.5 72 48.6
FAN13G2590 Fragaria x ananassa HOM05D001867 ORTHO05D001708 2.9e-06 55.5 72 48.6
FAN18G0011 Fragaria x ananassa HOM05D001867 ORTHO05D001708 2.9e-06 55.5 72 48.6
Glyma.01G079900 Glycine max HOM05D001867 ORTHO05D001708 2.9e-06 55.5 114 41.2
Duzib068G0794 Durio zibethinus HOM05D001867 ORTHO05D001708 5.0e-06 54.7 75 49.3
BcaC02g10161 Brassica carinata HOM05D001867 ORTHO05D001708 6.5e-06 54.3 94 43.6
Gohir.A12G095200 Gossypium hirsutum HOM05D001867 ORTHO05D001708 6.5e-06 54.3 75 50.7
Lalb_Chr12g0207861 Lupinus albus HOM05D001867 ORTHO05D001708 6.5e-06 54.3 78 47.4
Rhsim01G0135400 Rhododendron simsii HOM05D001867 ORTHO05D001708 6.5e-06 54.3 97 43.3
Dinv21642 Davidia involucrata HOM05D001867 ORTHO05D001708 8.5e-06 53.9 90 40.0
Sabra03G0047600 Salix brachista HOM05D001867 ORTHO05D001708 8.5e-06 53.9 97 46.4


User provided reference genes

Program Settings