Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10015823m.g Eutrema salsugineum HOM05D008154 ORTHO05D012061 9.1e-95 350.1 165 100.0
Sp6g31770 Schrenkiella parvula HOM05D008154 ORTHO05D012061 6.5e-85 317.4 163 90.8
BcaC03g13395 Brassica carinata HOM05D008154 ORTHO05D012061 4.2e-76 288.1 160 82.5
C02p05410 Brassica napus HOM05D008154 ORTHO05D012061 4.2e-76 288.1 160 82.5
A02p01230 Brassica napus HOM05D008154 ORTHO05D012061 5.5e-76 287.7 160 81.9
BraA02t05102Z Brassica rapa HOM05D008154 ORTHO05D012061 5.5e-76 287.7 160 81.9
BolC2t06489H Brassica oleracea HOM05D008154 ORTHO05D012061 1.2e-75 286.6 160 81.9
BcaNung02650 Brassica carinata HOM05D008154 ORTHO05D012061 6.8e-74 280.8 160 80.0
Carub.0006s1036 Capsella rubella HOM05D008154 ORTHO05D012061 1.2e-73 280.0 167 79.0
AL6G22580 Arabidopsis lyrata HOM05D008154 ORTHO05D012061 1.5e-73 279.6 163 80.4
AT5G11830 Arabidopsis thaliana HOM05D008154 ORTHO05D012061 2.0e-73 279.3 166 79.5
CARHR201330 Cardamine hirsuta HOM05D008154 ORTHO05D012061 7.0e-71 270.8 164 76.8
BcaB01g05451 Brassica carinata HOM05D008154 ORTHO05D012061 1.5e-65 253.1 165 73.3
THA.LOC104811241 Tarenaya hassleriana HOM05D008154 ORTHO05D012061 3.7e-56 221.9 166 62.0
THA.LOC104811313 Tarenaya hassleriana HOM05D008154 ORTHO05D012557 3.7e-56 221.9 166 62.0
BcaNung03981 Brassica carinata HOM05D008154 ORTHO05D012061 9.2e-55 217.2 166 59.6
THA.LOC104799699 Tarenaya hassleriana HOM05D008154 ORTHO05D012061 2.7e-54 215.7 164 61.0
A06p36580 Brassica napus HOM05D008154 ORTHO05D012061 1.7e-53 213.0 163 58.9
BraA06t26584Z Brassica rapa HOM05D008154 ORTHO05D012061 2.3e-53 212.6 160 59.4
CARHR187350 Cardamine hirsuta HOM05D008154 ORTHO05D012061 5.0e-53 211.5 160 60.6
C07p41900 Brassica napus HOM05D008154 ORTHO05D012061 8.6e-53 210.7 163 58.3
Sp2g21650 Schrenkiella parvula HOM05D008154 ORTHO05D012061 1.5e-52 209.9 163 57.7
BolC7t44720H Brassica oleracea HOM05D008154 ORTHO05D012061 1.9e-52 209.5 163 57.7
BcaB04g19752 Brassica carinata HOM05D008154 ORTHO05D012061 4.3e-52 208.4 160 60.0
Carub.0006s2384 Capsella rubella HOM05D008154 ORTHO05D012557 8.1e-51 204.1 150 60.7
BcaC04g23599 Brassica carinata HOM05D008154 ORTHO05D012061 1.8e-50 203.0 163 56.4
Thhalv10005491m.g Eutrema salsugineum HOM05D008154 ORTHO05D012557 1.2e-49 200.3 146 61.0
AL6G38080 Arabidopsis lyrata HOM05D008154 ORTHO05D012557 1.5e-49 199.9 143 60.8
AT5G26090 Arabidopsis thaliana HOM05D008154 ORTHO05D012557 2.6e-49 199.1 143 60.1
C09p06570 Brassica napus HOM05D008154 ORTHO05D012557 2.7e-46 189.1 146 58.9
BolC9t53583H Brassica oleracea HOM05D008154 ORTHO05D012557 2.7e-46 189.1 146 58.9
A09p06010 Brassica napus HOM05D008154 ORTHO05D012557 1.3e-45 186.8 141 60.3
BraA09t36243Z Brassica rapa HOM05D008154 ORTHO05D012557 1.3e-45 186.8 141 60.3
BcaNung03980 Brassica carinata HOM05D008154 ORTHO05D012061 8.4e-32 141.0 113 55.8
BolC3t13113H Brassica oleracea HOM05D000239 ORTHO05D000484 1.3e-21 107.1 58 81.0
BraA03t09861Z Brassica rapa HOM05D003166 ORTHO05D003605 1.8e-21 106.7 58 79.3
Aa31LG8G3050 Aethionema arabicum HOM05D008154 ORTHO05D012553 1.9e-20 103.2 161 36.6
A05p33540 Brassica napus HOM05D008154 ORTHO05D012553 9.6e-20 100.9 157 36.9
BraA05t22175Z Brassica rapa HOM05D008154 ORTHO05D012553 9.6e-20 100.9 157 36.9
BraA05t22176Z Brassica rapa HOM05D008154 ORTHO05D012553 1.3e-19 100.5 157 36.9
BolC5t33799H Brassica oleracea HOM05D008154 ORTHO05D012553 2.8e-19 99.4 157 36.9
C05p50530 Brassica napus HOM05D008154 ORTHO05D012553 4.8e-19 98.6 157 36.9
BcaC05g28926 Brassica carinata HOM05D008154 ORTHO05D012553 1.8e-18 96.7 155 36.8
Carub.0003s1560 Capsella rubella HOM05D008154 ORTHO05D012553 1.8e-18 96.7 157 35.7
BcaB04g20900 Brassica carinata HOM05D008154 ORTHO05D012553 4.0e-18 95.5 157 36.3
Thhalv10022366m.g Eutrema salsugineum HOM05D008154 ORTHO05D012553 4.0e-18 95.5 157 35.7
Sp3g14190 Schrenkiella parvula HOM05D008154 ORTHO05D012553 4.0e-18 95.5 158 35.4
BcaC09g48565 Brassica carinata HOM05D008154 ORTHO05D012553 9.0e-18 94.4 157 35.0
BolC1t04810H Brassica oleracea HOM05D008154 ORTHO05D012553 9.0e-18 94.4 157 35.0
A01p38240 Brassica napus HOM05D008154 ORTHO05D012553 1.2e-17 94.0 157 35.0
CARHR090960 Cardamine hirsuta HOM05D008154 ORTHO05D012553 1.2e-17 94.0 157 34.4
AT3G15860 Arabidopsis thaliana HOM05D008154 ORTHO05D012553 1.5e-17 93.6 158 34.8
C01p48500 Brassica napus HOM05D008154 ORTHO05D012553 2.0e-17 93.2 159 35.2
BraA01t03880Z Brassica rapa HOM05D008154 ORTHO05D012553 3.4e-17 92.4 157 34.4
THA.LOC104810614 Tarenaya hassleriana HOM05D008154 ORTHO05D012553 1.8e-13 80.1 129 36.4
Sp2g21640 Schrenkiella parvula HOM05D008154 ORTHO05D012557 2.0e-09 66.6 134 32.8
BcaB04g19751 Brassica carinata HOM05D008154 ORTHO05D012557 3.4e-09 65.9 162 32.7
BcaC03g17839 Brassica carinata HOM05D008154 ORTHO05D012557 6.5e-08 61.6 127 33.1
A02p39190 Brassica napus HOM05D008154 ORTHO05D012557 6.5e-08 61.6 127 33.1
C02p58790 Brassica napus HOM05D008154 ORTHO05D012557 6.5e-08 61.6 127 33.1
BraA02t08884Z Brassica rapa HOM05D008154 ORTHO05D012557 6.5e-08 61.6 127 33.1
BolC2t11938H Brassica oleracea HOM05D008154 ORTHO05D012557 8.4e-08 61.2 127 32.3
Aa31LG11G5040 Aethionema arabicum HOM05D008154 ORTHO05D012557 1.9e-07 60.1 159 31.4
BcaC04g23600 Brassica carinata HOM05D008154 ORTHO05D012557 5.5e-07 58.5 151 32.5
THA.LOC104811312 Tarenaya hassleriana HOM05D012138 ORTHO05D014405 9.3e-07 57.8 126 30.2
CARHR187360 Cardamine hirsuta HOM05D008154 ORTHO05D012557 3.5e-06 55.8 139 33.1
BcaB07g29945 Brassica carinata HOM05D008154 ORTHO05D012557 6.0e-06 55.1 128 32.0


User provided reference genes

Program Settings