Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10015819m.g Eutrema salsugineum HOM05D006736 ORTHO05D008459 6.4e-58 227.3 119 100.0
Sp6g17830 Schrenkiella parvula HOM05D006736 ORTHO05D008459 1.3e-47 193.0 118 86.4
BcaC04g20175 Brassica carinata HOM05D006736 ORTHO05D008459 4.2e-41 171.4 119 79.0
C09p46970 Brassica napus HOM05D006736 ORTHO05D008459 1.6e-40 169.5 119 78.2
BolC9t57545H Brassica oleracea HOM05D006736 ORTHO05D008459 3.5e-40 168.3 119 77.3
BcaB08g35964 Brassica carinata HOM05D006736 ORTHO05D008459 1.0e-39 166.8 119 77.3
AL8G31560 Arabidopsis lyrata HOM05D006736 ORTHO05D008459 3.7e-37 158.3 119 73.9
AT5G55980 Arabidopsis thaliana HOM05D006736 ORTHO05D008459 1.4e-36 156.4 119 73.9
Carub.0008s1632 Capsella rubella HOM05D006736 ORTHO05D008459 2.0e-35 152.5 122 73.0
BcaB01g04378 Brassica carinata HOM05D006736 ORTHO05D008459 2.2e-34 149.1 104 79.8
CARHR269350 Cardamine hirsuta HOM05D006736 ORTHO05D008459 2.9e-34 148.7 119 71.4
Aa31LG3G11890 Aethionema arabicum HOM05D006736 ORTHO05D008459 7.4e-30 134.0 119 67.2
A10p13210 Brassica napus HOM05D006736 ORTHO05D008459 2.6e-19 99.0 53 90.6
BraA10t43419Z Brassica rapa HOM05D006736 ORTHO05D008459 2.6e-19 99.0 53 90.6
Cpa.g.sc12.109 Carica papaya HOM05D006736 ORTHO05D008459 3.0e-15 85.5 54 77.8
Duzib268G0079 Durio zibethinus HOM05D006736 ORTHO05D008459 8.2e-13 77.4 95 50.5
Thecc.07G008000 Theobroma cacao HOM05D006736 ORTHO05D008459 6.9e-12 74.3 83 51.8
Medtr3g461010 Medicago truncatula HOM05D006736 ORTHO05D008459 1.2e-11 73.6 63 60.3
VMungo0540G0896 Vigna mungo HOM05D006736 ORTHO05D008459 1.2e-11 73.6 85 60.0
QL08p003180 Quercus lobata HOM05D006736 ORTHO05D008459 1.5e-11 73.2 52 69.2
Glyma.08G332400 Glycine max HOM05D006736 ORTHO05D008459 2.0e-11 72.8 108 47.2
Glyma.18G074500 Glycine max HOM05D006736 ORTHO05D008459 2.6e-11 72.4 55 67.3
Eucgr.F02027 Eucalyptus grandis HOM05D006736 ORTHO05D008459 3.4e-11 72.0 83 54.2
Phvul.006G059230 Phaseolus vulgaris HOM05D006736 ORTHO05D008459 3.4e-11 72.0 83 54.2
Prupe.6G028200 Prunus persica HOM05D006736 ORTHO05D008459 3.4e-11 72.0 88 50.0
CiPaw.11G206800 Carya illinoinensis HOM05D006736 ORTHO05D008459 7.7e-11 70.9 84 52.4
Duzib170G0862 Durio zibethinus HOM05D006736 ORTHO05D008459 7.7e-11 70.9 84 51.2
BcaC01g06401 Brassica carinata HOM05D006736 ORTHO05D008459 2.2e-10 69.3 42 81.0
Cfa021889 Carpinus fangiana HOM05D006736 ORTHO05D008459 2.2e-10 69.3 84 51.2
COL.COLO4_07740 Corchorus olitorius HOM05D006736 ORTHO05D008459 3.8e-10 68.6 66 57.6
TWI38G1827 Tripterygium wilfordii HOM05D006736 ORTHO05D008459 6.5e-10 67.8 53 58.5
Gohir.A13G130900 Gossypium hirsutum HOM05D006736 ORTHO05D008459 8.5e-10 67.4 64 53.1
FAN16G2066 Fragaria x ananassa HOM05D002691 ORTHO05D003304 1.1e-09 67.0 57 57.9
FvH4_3g42280 Fragaria vesca HOM05D006736 ORTHO05D008459 1.4e-09 66.6 57 57.9
FAN11G0661 Fragaria x ananassa HOM05D006736 ORTHO05D008459 1.4e-09 66.6 57 57.9
FAN25G3397 Fragaria x ananassa HOM05D006736 ORTHO05D008459 1.4e-09 66.6 57 57.9
Gohir.D13G134200 Gossypium hirsutum HOM05D006736 ORTHO05D008459 1.4e-09 66.6 64 53.1
Gorai.013G150500 Gossypium raimondii HOM05D006736 ORTHO05D008459 1.4e-09 66.6 64 53.1
Psat5g166560 Pisum sativum HOM05D006736 ORTHO05D008459 1.9e-09 66.2 90 47.8
RcHm_v2.0_Chr5g0075611 Rosa chinensis HOM05D006736 ORTHO05D008459 1.9e-09 66.2 92 45.7
TWI39G1297 Tripterygium wilfordii HOM05D006736 ORTHO05D008459 2.5e-09 65.9 65 56.9
Rhsim06G0178800 Rhododendron simsii HOM05D006736 ORTHO05D008459 3.2e-09 65.5 77 49.4
TPR.G17947 Trifolium pratense HOM05D006736 ORTHO05D008459 5.5e-09 64.7 101 44.6
GSVIVG01014741001 Vitis vinifera HOM05D006736 ORTHO05D008459 5.5e-09 64.7 85 49.4
Potri.001G371400 Populus trichocarpa HOM05D006736 ORTHO05D008459 1.2e-08 63.5 80 51.2
TAR624G0983 Trochodendron aralioides HOM05D006736 ORTHO05D008459 1.2e-08 63.5 99 44.4
Lalb_Chr15g0082301 Lupinus albus HOM05D006736 ORTHO05D008459 2.1e-08 62.8 86 47.7
Solyc07g045200.1 Solanum lycopersicum HOM05D006736 ORTHO05D008459 2.1e-08 62.8 52 61.5
ClCG10G003900 Citrullus lanatus HOM05D006736 ORTHO05D008459 2.7e-08 62.4 79 46.8
ClCG10G004060 Citrullus lanatus HOM05D006736 ORTHO05D008459 2.7e-08 62.4 79 46.8
FAN21G1732 Fragaria x ananassa HOM05D006736 ORTHO05D008459 3.6e-08 62.0 35 74.3
Peaxi162Scf01164g00020 Petunia axillaris HOM05D006736 ORTHO05D008459 3.6e-08 62.0 52 61.5
Haze_09864 Corylus avellana HOM05D004577 ORTHO05D005062 6.1e-08 61.2 67 49.3
CsaV3_7G023850 Cucumis sativus L. HOM05D006736 ORTHO05D008459 6.1e-08 61.2 38 68.4
Gohir.D01G078200 Gossypium hirsutum HOM05D006736 ORTHO05D008459 6.1e-08 61.2 38 68.4
Gorai.002G102800 Gossypium raimondii HOM05D006736 ORTHO05D008459 6.1e-08 61.2 38 68.4
Lj6g0005510 Lotus japonicus HOM05D006736 ORTHO05D008459 6.1e-08 61.2 80 46.2
Sabra16G0244100 Salix brachista HOM05D006736 ORTHO05D008459 6.1e-08 61.2 80 48.8
ClCG09G021530 Citrullus lanatus HOM05D006736 ORTHO05D008459 7.9e-08 60.8 36 72.2
MELO3C024968.2 Cucumis melo HOM05D006736 ORTHO05D008459 7.9e-08 60.8 38 68.4
Sabra11G0088600 Salix brachista HOM05D006736 ORTHO05D008459 7.9e-08 60.8 63 52.4
Sopen07g023750 Solanum pennellii HOM05D006736 ORTHO05D008459 7.9e-08 60.8 74 50.0
CARHR087850 Cardamine hirsuta HOM05D006736 ORTHO05D008459 1.0e-07 60.5 86 45.3
Ciclev10010675m.g Citrus clementina HOM05D006736 ORTHO05D008459 1.0e-07 60.5 50 60.0
Atru.chr2.3834 Acer truncatum HOM05D006736 ORTHO05D008459 1.8e-07 59.7 44 63.6
CsaV3_3G003890 Cucumis sativus L. HOM05D006736 ORTHO05D008459 1.8e-07 59.7 88 45.5
Gohir.A01G093700 Gossypium hirsutum HOM05D006736 ORTHO05D008459 1.8e-07 59.7 38 65.8
AL3G25020 Arabidopsis lyrata HOM05D006736 ORTHO05D008459 2.3e-07 59.3 74 45.9
BcaB06g25478 Brassica carinata HOM05D006736 ORTHO05D008459 2.3e-07 59.3 71 47.9
Aqoxy4G01886 Aquilegia oxysepala HOM05D006736 ORTHO05D008459 3.0e-07 58.9 40 70.0
Lalb_Chr20g0114121 Lupinus albus HOM05D006736 ORTHO05D008459 3.0e-07 58.9 54 57.4
Manes.01G003400 Manihot esculenta HOM05D006736 ORTHO05D008459 5.1e-07 58.2 92 35.9
Oeu036994.1 Olea europaea HOM05D006736 ORTHO05D008459 5.1e-07 58.2 49 63.3
Migut.M00067 Erythranthe guttata HOM05D006736 ORTHO05D008459 6.7e-07 57.8 82 45.1
Solyc12g006220.3 Solanum lycopersicum HOM05D006736 ORTHO05D008459 6.7e-07 57.8 98 41.8
Sopen12g002170 Solanum pennellii HOM05D006736 ORTHO05D008459 6.7e-07 57.8 98 41.8
Aa31LG8G450 Aethionema arabicum HOM05D006736 ORTHO05D008459 1.1e-06 57.0 69 47.8
arahy.Tifrunner.gnm1.ann1.FR49Y0 Arachis hypogaea HOM05D006736 ORTHO05D008459 1.1e-06 57.0 45 62.2
arahy.Tifrunner.gnm1.ann1.P4RFEM Arachis hypogaea HOM05D006736 ORTHO05D008459 1.1e-06 57.0 45 62.2
Gohir.A03G134800 Gossypium hirsutum HOM05D007247 ORTHO05D009208 1.1e-06 57.0 70 50.0
Gohir.D02G158400 Gossypium hirsutum HOM05D007247 ORTHO05D009208 1.1e-06 57.0 70 50.0
AT3G13227 Arabidopsis thaliana HOM05D006736 ORTHO05D008459 1.5e-06 56.6 81 44.4
Glyma.14G011700 Glycine max HOM05D006736 ORTHO05D008459 1.5e-06 56.6 76 44.7
Sp3g11420 Schrenkiella parvula HOM05D006736 ORTHO05D008459 1.5e-06 56.6 103 35.0
Sed0023265 Sechium edule HOM05D006736 ORTHO05D008459 1.5e-06 56.6 68 47.1
Sc03g0011540 Simmondsia chinensis HOM05D006736 ORTHO05D008459 1.5e-06 56.6 38 65.8
Thecc.02G261000 Theobroma cacao HOM05D007247 ORTHO05D009208 1.5e-06 56.6 64 53.1
Dinv15222 Davidia involucrata HOM05D007247 ORTHO05D009208 2.0e-06 56.2 102 39.2
BcaC05g29199 Brassica carinata HOM05D006736 ORTHO05D008459 2.6e-06 55.8 77 44.2
MELO3C014070.2 Cucumis melo HOM05D006736 ORTHO05D008459 2.6e-06 55.8 76 44.7
Dinv14726 Davidia involucrata HOM05D007247 ORTHO05D009208 2.6e-06 55.8 62 56.5
Haze_12254 Corylus avellana HOM05D007247 ORTHO05D009208 3.3e-06 55.5 56 53.6
Duzib251G0560 Durio zibethinus HOM05D007247 ORTHO05D009208 3.3e-06 55.5 85 44.7
Migut.H01277 Erythranthe guttata HOM05D006736 ORTHO05D008459 3.3e-06 55.5 65 53.8
Gorai.005G177800 Gossypium raimondii HOM05D007247 ORTHO05D009208 3.3e-06 55.5 105 40.0
MBI14_g39127_MAGBIO Magnolia biondii HOM05D006736 ORTHO05D008459 3.3e-06 55.5 97 42.3
Duzib248G0486 Durio zibethinus HOM05D007247 ORTHO05D009208 4.4e-06 55.1 64 53.1
MSTRG.13349 Avicennia marina HOM05D007247 ORTHO05D009208 5.7e-06 54.7 68 48.5
BolC5t34141H Brassica oleracea HOM05D006736 ORTHO05D008459 5.7e-06 54.7 96 41.7
CANSAT01G0364 Cannabis sativa HOM05D007247 ORTHO05D009208 5.7e-06 54.7 38 65.8
Carub.0003s1260 Capsella rubella HOM05D006736 ORTHO05D008459 5.7e-06 54.7 103 37.9
CiPaw.06G067400 Carya illinoinensis HOM05D007247 ORTHO05D009208 5.7e-06 54.7 33 72.7
Thhalv10021795m.g Eutrema salsugineum HOM05D006736 ORTHO05D008459 5.7e-06 54.7 110 34.5
DCAR_008749 Daucus carota HOM05D006736 ORTHO05D008459 7.4e-06 54.3 67 47.8
Manes.05G200400 Manihot esculenta HOM05D006736 ORTHO05D008459 7.4e-06 54.3 74 41.9
Peaxi162Scf00047g02119 Petunia axillaris HOM05D006736 ORTHO05D008459 7.4e-06 54.3 62 53.2
Atru.chr11.2143 Acer truncatum HOM05D007247 ORTHO05D009208 9.7e-06 53.9 44 59.1


User provided reference genes

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