Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10015656m.g Eutrema salsugineum HOM05D008373 ORTHO05D010873 2.6e-100 368.6 171 100.0
Sp6g31780 Schrenkiella parvula HOM05D008373 ORTHO05D010873 1.0e-77 293.5 174 77.6
AT5G11820 Arabidopsis thaliana HOM05D008373 ORTHO05D010873 8.3e-75 283.9 174 74.1
C09p65010 Brassica napus HOM05D008373 ORTHO05D010873 7.8e-73 277.3 163 78.5
BcaC04g19192 Brassica carinata HOM05D008373 ORTHO05D010873 1.7e-72 276.2 163 77.9
BolC9t59329H Brassica oleracea HOM05D008373 ORTHO05D010873 1.7e-72 276.2 163 77.9
Carub.0006s1035 Capsella rubella HOM05D008373 ORTHO05D010873 2.9e-72 275.4 168 73.2
A10p25930 Brassica napus HOM05D008373 ORTHO05D010873 3.9e-72 275.0 163 77.3
BraA10t44655Z Brassica rapa HOM05D008373 ORTHO05D010873 4.3e-71 271.6 163 76.1
A02p01220 Brassica napus HOM05D008373 ORTHO05D010873 2.3e-69 265.8 174 72.4
BraA02t05101Z Brassica rapa HOM05D008373 ORTHO05D010873 2.3e-69 265.8 174 72.4
BcaC03g13394 Brassica carinata HOM05D008373 ORTHO05D010873 1.2e-68 263.5 174 71.8
AL6G22570 Arabidopsis lyrata HOM05D008373 ORTHO05D010873 2.9e-67 258.8 156 73.1
BcaNung02651 Brassica carinata HOM05D008373 ORTHO05D010873 3.2e-66 255.4 177 67.8
BolC2t06488H Brassica oleracea HOM05D008373 ORTHO05D010873 2.7e-65 252.3 176 69.3
CARHR201340 Cardamine hirsuta HOM05D008373 ORTHO05D010873 1.3e-64 250.0 166 66.3
C02p05400 Brassica napus HOM05D008373 ORTHO05D010873 1.9e-63 246.1 177 68.9
THA.LOC104811243 Tarenaya hassleriana HOM05D008373 ORTHO05D010873 2.7e-49 199.1 170 57.1
THA.LOC104811315 Tarenaya hassleriana HOM05D008373 ORTHO05D010873 4.2e-26 122.1 151 43.0
THA.LOC104811314 Tarenaya hassleriana HOM05D008373 ORTHO05D010873 2.5e-23 112.8 170 37.6
THA.LOC104811242 Tarenaya hassleriana HOM05D008373 ORTHO05D010873 5.6e-23 111.7 149 37.6
Thhalv10015698m.g Eutrema salsugineum HOM05D008373 ORTHO05D010873 2.8e-22 109.4 147 39.5
BolC7t44724H Brassica oleracea HOM05D008373 ORTHO05D010873 3.7e-22 109.0 156 39.1
C07p41930 Brassica napus HOM05D008373 ORTHO05D010873 4.8e-22 108.6 156 38.5
A06p36550 Brassica napus HOM05D008373 ORTHO05D010873 1.8e-21 106.7 156 38.5
BraA06t26581Z Brassica rapa HOM05D008373 ORTHO05D010873 1.8e-21 106.7 156 38.5
A02p39180 Brassica napus HOM05D008373 ORTHO05D010873 3.1e-21 105.9 151 39.7
BraA02t08883Z Brassica rapa HOM05D008373 ORTHO05D010873 6.9e-21 104.8 148 38.5
BcaNung03984 Brassica carinata HOM05D008373 ORTHO05D010873 9.0e-21 104.4 148 38.5
BraA09t36244Z Brassica rapa HOM05D008373 ORTHO05D010873 9.0e-21 104.4 150 39.3
A09p06020 Brassica napus HOM05D008373 ORTHO05D010873 1.2e-20 104.0 150 39.3
BcaB04g19754 Brassica carinata HOM05D008373 ORTHO05D010873 1.5e-20 103.6 150 38.7
BcaC04g23598 Brassica carinata HOM05D008373 ORTHO05D010873 1.5e-20 103.6 145 38.6
C09p06580 Brassica napus HOM05D008373 ORTHO05D010873 1.5e-20 103.6 145 38.6
BolC9t53584H Brassica oleracea HOM05D008373 ORTHO05D010873 1.5e-20 103.6 145 38.6
CARHR187330 Cardamine hirsuta HOM05D008373 ORTHO05D010873 2.0e-20 103.2 156 39.7
Aa31LG3G15380 Aethionema arabicum HOM05D008373 ORTHO05D010873 3.4e-20 102.4 129 39.5
Sp2g21670 Schrenkiella parvula HOM05D008373 ORTHO05D010873 3.4e-20 102.4 155 36.1
AT5G26050 Arabidopsis thaliana HOM05D008373 ORTHO05D010873 7.6e-20 101.3 159 38.4
Thhalv10005364m.g Eutrema salsugineum HOM05D008373 ORTHO05D010873 3.8e-19 99.0 151 39.1
AL6G38040 Arabidopsis lyrata HOM05D008373 ORTHO05D010873 1.1e-18 97.4 159 36.5
Carub.0006s2381 Capsella rubella HOM05D008373 ORTHO05D010873 2.5e-18 96.3 149 36.2
BcaC03g17838 Brassica carinata HOM05D000073 ORTHO05D008214 1.5e-12 77.0 140 36.4
AT5G26060 Arabidopsis thaliana HOM05D008373 ORTHO05D015254 7.6e-12 74.7 145 31.0
C07p41920 Brassica napus HOM05D008373 ORTHO05D015254 1.3e-11 73.9 132 31.1
Thhalv10005065m.g Eutrema salsugineum HOM05D008373 ORTHO05D015254 1.3e-11 73.9 119 32.8
A06p36560 Brassica napus HOM05D008373 ORTHO05D015254 2.2e-11 73.2 132 31.1
BraA06t26582Z Brassica rapa HOM05D008373 ORTHO05D015254 2.2e-11 73.2 132 31.1
THA.LOC104799169 Tarenaya hassleriana HOM05D008373 ORTHO05D015254 3.8e-11 72.4 134 32.8
BcaNung03983 Brassica carinata HOM05D008373 ORTHO05D015254 5.0e-11 72.0 134 29.9
BolC7t44722H Brassica oleracea HOM05D008373 ORTHO05D015254 5.0e-11 72.0 132 31.1
Aa31LG11G5030 Aethionema arabicum HOM05D008373 ORTHO05D015254 5.5e-10 68.6 132 30.3
C02p58780 Brassica napus HOM05D008373 ORTHO05D010873 5.5e-10 68.6 104 39.4
Carub.0006s2382 Capsella rubella HOM05D008373 ORTHO05D015254 9.3e-10 67.8 145 30.3
AL6G38050 Arabidopsis lyrata HOM05D008373 ORTHO05D015254 1.6e-09 67.0 132 30.3
CARHR187340 Cardamine hirsuta HOM05D008373 ORTHO05D015254 4.6e-09 65.5 131 29.0
BolC2t11937H Brassica oleracea HOM05D008373 ORTHO05D010873 5.1e-08 62.0 105 38.1
Cfa002530 Carpinus fangiana HOM05D000256 ORTHO05D000119 6.3e-06 55.1 93 32.3


User provided reference genes

Program Settings