Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10015281m.g Eutrema salsugineum HOM05D000455 ORTHO05D000434 7.6e-43 176.8 91 100.0
Thhalv10027199m.g Eutrema salsugineum HOM05D000455 ORTHO05D000434 1.8e-28 129.0 64 96.9
Thhalv10024319m.g Eutrema salsugineum HOM05D000455 ORTHO05D000434 1.5e-22 109.4 54 96.3
A03p63490 Brassica napus HOM05D000455 ORTHO05D000434 7.6e-19 97.1 60 78.3
Sp7g33050 Schrenkiella parvula HOM05D000455 ORTHO05D000434 2.2e-18 95.5 60 78.3
BraA03t15419Z Brassica rapa HOM05D000455 ORTHO05D000434 2.9e-18 95.1 60 76.7
Carub.0007s0503 Capsella rubella HOM05D000455 ORTHO05D000434 2.9e-18 95.1 54 83.3
A06p34150 Brassica napus HOM05D000455 ORTHO05D000434 3.8e-18 94.7 60 75.0
BraA06t26348Z Brassica rapa HOM05D000455 ORTHO05D000434 3.8e-18 94.7 60 75.0
BcaNung04606 Brassica carinata HOM05D000455 ORTHO05D000434 5.0e-18 94.4 60 76.7
C07p61060 Brassica napus HOM05D000455 ORTHO05D000434 8.5e-18 93.6 60 75.0
BolC7t46531H Brassica oleracea HOM05D000455 ORTHO05D000434 8.5e-18 93.6 60 75.0
Sp3g30490 Schrenkiella parvula HOM05D000455 ORTHO05D000434 1.9e-17 92.4 60 75.0
BcaC01g02944 Brassica carinata HOM05D000455 ORTHO05D000434 2.5e-17 92.0 60 71.7
C03p58040 Brassica napus HOM05D000455 ORTHO05D000434 2.5e-17 92.0 60 71.7
BolC3t18078H Brassica oleracea HOM05D000455 ORTHO05D000434 2.5e-17 92.0 60 71.7
BcaC06g36225 Brassica carinata HOM05D000455 ORTHO05D000434 5.5e-17 90.9 54 79.6
C07p06340 Brassica napus HOM05D000455 ORTHO05D000434 5.5e-17 90.9 54 79.6
BolC7t41050H Brassica oleracea HOM05D000455 ORTHO05D000434 7.2e-17 90.5 54 77.8
BcaB08g34707 Brassica carinata HOM05D000455 ORTHO05D000434 9.3e-17 90.1 60 71.7
AL7G15900 Arabidopsis lyrata HOM05D000455 ORTHO05D000434 1.2e-16 89.7 54 77.8
AT4G35270 Arabidopsis thaliana HOM05D000455 ORTHO05D000434 1.2e-16 89.7 54 77.8
A07p03980 Brassica napus HOM05D000455 ORTHO05D000434 1.2e-16 89.7 54 77.8
BraA07t28189Z Brassica rapa HOM05D000455 ORTHO05D000434 1.2e-16 89.7 54 77.8
A01p03290 Brassica napus HOM05D000455 ORTHO05D000434 1.6e-16 89.4 60 73.3
BraA01t00314Z Brassica rapa HOM05D000455 ORTHO05D000434 1.6e-16 89.4 60 73.3
BcaB03g16463 Brassica carinata HOM05D000455 ORTHO05D000434 2.1e-16 89.0 54 77.8
BcaB03g11774 Brassica carinata HOM05D000455 ORTHO05D000434 4.6e-16 87.8 54 77.8
BcaNung00613 Brassica carinata HOM05D000455 ORTHO05D000434 4.6e-16 87.8 60 71.7
C01p03630 Brassica napus HOM05D000455 ORTHO05D000434 4.6e-16 87.8 60 71.7
BolC1t00354H Brassica oleracea HOM05D000455 ORTHO05D000434 4.6e-16 87.8 60 71.7
C03p84870 Brassica napus HOM05D000455 ORTHO05D000434 7.9e-16 87.0 60 70.0
BolC3t20781H Brassica oleracea HOM05D000455 ORTHO05D000434 7.9e-16 87.0 60 70.0
THA.LOC104807396 Tarenaya hassleriana HOM05D000455 ORTHO05D000434 7.9e-16 87.0 54 75.9
THA.LOC104819685 Tarenaya hassleriana HOM05D000455 ORTHO05D000434 1.8e-15 85.9 60 68.3
Carub.0003s3108 Capsella rubella HOM05D000455 ORTHO05D000434 1.7e-13 79.3 54 68.5
AT2G17150 Arabidopsis thaliana HOM05D000455 ORTHO05D000434 2.2e-13 79.0 54 66.7
CARHR243590 Cardamine hirsuta HOM05D000455 ORTHO05D000434 1.1e-12 76.6 54 66.7
Aa31LG8G14550 Aethionema arabicum HOM05D000455 ORTHO05D000434 2.2e-10 68.9 54 66.7
Cpa.g.sc20.206 Carica papaya HOM05D000455 ORTHO05D000434 8.5e-10 67.0 54 59.3
Thhalv10022536m.g Eutrema salsugineum HOM05D000455 ORTHO05D000434 1.6e-08 62.8 60 60.0
PGR142G3126 Punica granatum HOM05D000455 ORTHO05D000434 4.7e-08 61.2 54 51.9
Thecc.02G044500 Theobroma cacao HOM05D000455 ORTHO05D000434 4.7e-08 61.2 54 55.6
Gohir.A01G175100 Gossypium hirsutum HOM05D000455 ORTHO05D000434 3.0e-07 58.5 53 52.8
Gorai.002G206700 Gossypium raimondii HOM05D000455 ORTHO05D000434 3.0e-07 58.5 53 52.8
AL3G50000 Arabidopsis lyrata HOM05D000455 ORTHO05D000434 3.9e-07 58.2 47 61.7
Gohir.D01G166200 Gossypium hirsutum HOM05D000455 ORTHO05D000434 1.1e-06 56.6 53 50.9
Gohir.A12G033400 Gossypium hirsutum HOM05D000455 ORTHO05D000434 1.5e-06 56.2 54 50.0
Gohir.D12G039400 Gossypium hirsutum HOM05D000455 ORTHO05D000434 1.5e-06 56.2 54 50.0
Gorai.008G041100 Gossypium raimondii HOM05D000455 ORTHO05D000434 1.5e-06 56.2 54 50.0
Duzib052G0977 Durio zibethinus HOM05D000455 ORTHO05D000434 2.0e-06 55.8 54 50.0
GSVIVG01013370001 Vitis vinifera HOM05D000455 ORTHO05D000434 2.6e-06 55.5 52 55.8
Ciclev10027765m.g Citrus clementina HOM05D000455 ORTHO05D000434 3.3e-06 55.1 54 50.0
Gohir.A03G209800 Gossypium hirsutum HOM05D000455 ORTHO05D000434 3.3e-06 55.1 54 48.1
Gohir.D02G231450 Gossypium hirsutum HOM05D000455 ORTHO05D000434 3.3e-06 55.1 54 48.1
Gorai.005G259100 Gossypium raimondii HOM05D000455 ORTHO05D000434 3.3e-06 55.1 54 48.1
SEGI_15492 Sequoiadendron giganteum HOM05D000455 ORTHO05D000434 3.3e-06 55.1 54 51.9
Eucgr.I01519 Eucalyptus grandis HOM05D000455 ORTHO05D000434 4.4e-06 54.7 54 50.0
Aa31LG2G14810 Aethionema arabicum HOM05D000455 ORTHO05D000434 5.7e-06 54.3 54 53.7
TAR376G0326 Trochodendron aralioides HOM05D000455 ORTHO05D000434 7.4e-06 53.9 54 50.0


User provided reference genes

Program Settings