Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10015148m.g Eutrema salsugineum HOM05D006437 ORTHO05D007973 8.6e-47 189.9 90 100.0
CARHR195740 Cardamine hirsuta HOM05D006437 ORTHO05D007973 1.4e-33 146.0 74 89.2
BcaC04g18789 Brassica carinata HOM05D006437 ORTHO05D007973 3.2e-33 144.8 74 89.2
AL6G28540 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 5.4e-33 144.1 74 87.8
Carub.0006s1569 Capsella rubella HOM05D006437 ORTHO05D007973 1.2e-32 142.9 74 87.8
Aqoxy7G00638 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 2.5e-30 135.2 72 83.3
AUR62023192 Chenopodium quinoa HOM05D006437 ORTHO05D007973 1.2e-29 132.9 71 83.1
AUR62023239 Chenopodium quinoa HOM05D006437 ORTHO05D007973 2.8e-29 131.7 71 81.7
Medtr3g067720 Medicago truncatula HOM05D006437 ORTHO05D007973 2.8e-29 131.7 71 81.7
A10p21920 Brassica napus HOM05D006437 ORTHO05D007973 4.7e-29 131.0 67 89.6
C09p59670 Brassica napus HOM05D006437 ORTHO05D007973 6.2e-29 130.6 66 90.9
BolC9t58806H Brassica oleracea HOM05D006437 ORTHO05D007973 6.2e-29 130.6 66 90.9
BraA10t44251Z Brassica rapa HOM05D006437 ORTHO05D007973 6.2e-29 130.6 66 90.9
DCAR_015248 Daucus carota HOM05D006437 ORTHO05D007973 8.1e-29 130.2 69 85.5
Zm00001eb158640 Zea mays HOM05D006437 ORTHO05D007973 1.8e-28 129.0 71 78.9
Haze_14223 Corylus avellana HOM05D006437 ORTHO05D007973 2.3e-28 128.6 72 76.4
Medtr3g067715 Medicago truncatula HOM05D006437 ORTHO05D007973 2.3e-28 128.6 71 80.3
TPR.G15845 Trifolium pratense HOM05D006437 ORTHO05D007973 2.3e-28 128.6 74 77.0
ECA238G0319 Erigeron canadensis HOM05D006437 ORTHO05D007973 5.2e-28 127.5 72 76.4
Cfa007843 Carpinus fangiana HOM05D006437 ORTHO05D007973 6.8e-28 127.1 72 76.4
CiPaw.03G068600 Carya illinoinensis HOM05D006437 ORTHO05D007973 6.8e-28 127.1 71 78.9
BcaC09g47742 Brassica carinata HOM05D006437 ORTHO05D007973 1.5e-27 125.9 73 78.1
A06p26360 Brassica napus HOM05D006437 ORTHO05D007973 1.5e-27 125.9 73 78.1
BNapus_Darmor_BZH_scaffold_162p00120 Brassica napus HOM05D006437 ORTHO05D007973 1.5e-27 125.9 73 78.1
BNapus_Darmor_BZH_scaffold_78p00110 Brassica napus HOM05D006437 ORTHO05D007973 1.5e-27 125.9 73 78.1
BolC1t05835H Brassica oleracea HOM05D006437 ORTHO05D007973 1.5e-27 125.9 73 78.1
Lsat_1_v5_gn_2_81461 Lactuca sativa HOM05D006437 ORTHO05D007973 2.0e-27 125.6 72 72.2
CANSAT78G0649 Cannabis sativa HOM05D006437 ORTHO05D007973 2.6e-27 125.2 71 76.1
QL11p004106 Quercus lobata HOM05D006437 ORTHO05D007973 3.4e-27 124.8 70 75.7
Sp3g02370 Schrenkiella parvula HOM05D006437 ORTHO05D007973 3.4e-27 124.8 73 76.7
AL3G12980 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 4.4e-27 124.4 73 75.3
AT3G03341 Arabidopsis thaliana HOM05D006437 ORTHO05D007973 4.4e-27 124.4 73 75.3
Carub.0003s0252 Capsella rubella HOM05D006437 ORTHO05D007973 4.4e-27 124.4 73 75.3
CARHR077390 Cardamine hirsuta HOM05D006437 ORTHO05D007973 4.4e-27 124.4 73 75.3
BcaB08g36768 Brassica carinata HOM05D002536 ORTHO05D007973 5.8e-27 124.0 63 85.7
PSO017G0604 Papaver somniferum HOM05D006437 ORTHO05D007973 5.8e-27 124.0 71 73.2
PSO478G4394 Papaver somniferum HOM05D006437 ORTHO05D007973 5.8e-27 124.0 71 73.2
TAR371G1269 Trochodendron aralioides HOM05D006437 ORTHO05D007973 5.8e-27 124.0 74 73.0
Thhalv10022211m.g Eutrema salsugineum HOM05D006437 ORTHO05D007973 9.9e-27 123.2 73 74.0
Potri.017G128600 Populus trichocarpa HOM05D006437 ORTHO05D007973 9.9e-27 123.2 72 73.6
TAR371G0259 Trochodendron aralioides HOM05D006437 ORTHO05D007973 1.3e-26 122.9 74 73.0
BraA01t04584Z Brassica rapa HOM05D006437 ORTHO05D007973 2.2e-26 122.1 73 76.7
Nn3g18216 Nelumbo nucifera HOM05D006437 ORTHO05D007973 2.2e-26 122.1 71 74.6
Os01g0644200 Oryza sativa ssp. japonica HOM05D006437 ORTHO05D007973 2.2e-26 122.1 71 71.8
Aqoxy5G01129 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 2.9e-26 121.7 71 70.4
BcaC09g47741 Brassica carinata HOM05D006437 ORTHO05D007973 2.9e-26 121.7 73 75.3
Dinv19010 Davidia involucrata HOM05D006437 ORTHO05D007973 2.9e-26 121.7 84 67.9
RcHm_v2.0_Chr1g0370661 Rosa chinensis HOM05D006437 ORTHO05D007973 2.9e-26 121.7 69 76.8
Aa31LG5G13890 Aethionema arabicum HOM05D006437 ORTHO05D007973 3.7e-26 121.3 73 71.2
HanXRQChr07g0193741 Helianthus annuus HOM05D006437 ORTHO05D007973 3.7e-26 121.3 71 71.8
MD09G1261500 Malus domestica HOM05D006437 ORTHO05D007973 3.7e-26 121.3 71 73.2
Phvul.001G231901 Phaseolus vulgaris HOM05D006437 ORTHO05D007973 4.9e-26 120.9 71 73.2
BcaC05g30279 Brassica carinata HOM05D006437 ORTHO05D007973 6.4e-26 120.6 73 74.0
FAN27G3274 Fragaria x ananassa HOM05D006437 ORTHO05D007973 6.4e-26 120.6 69 78.3
Cpa.g.sc604.3 Carica papaya HOM05D006437 ORTHO05D007973 1.1e-25 119.8 74 68.9
Ca_08164_v3 Cicer arietinum L. HOM05D006437 ORTHO05D007973 1.1e-25 119.8 71 73.2
AUR62023238 Chenopodium quinoa HOM05D006437 ORTHO05D007973 1.4e-25 119.4 71 73.2
FAN15G1984 Fragaria x ananassa HOM05D006437 ORTHO05D007973 1.4e-25 119.4 69 76.8
EL10Ac2g04484 Beta vulgaris HOM05D006437 ORTHO05D007973 1.9e-25 119.0 71 73.2
CSS0043713 Camellia sinensis var. sinensis HOM05D006437 ORTHO05D007973 1.9e-25 119.0 69 75.4
GSVIVG01030860001 Vitis vinifera HOM05D006437 ORTHO05D007973 1.9e-25 119.0 71 71.8
THA.LOC104820840 Tarenaya hassleriana HOM05D006437 ORTHO05D007973 2.4e-25 118.6 73 68.5
TAR629G2663 Trochodendron aralioides HOM05D006437 ORTHO05D007973 3.2e-25 118.2 71 71.8
CSS0019264 Camellia sinensis var. sinensis HOM05D006437 ORTHO05D007973 4.1e-25 117.9 74 68.9
Ciclev10013249m.g Citrus clementina HOM05D006437 ORTHO05D007973 4.1e-25 117.9 71 69.0
AUR62023191 Chenopodium quinoa HOM05D006437 ORTHO05D007973 5.4e-25 117.5 71 71.8
MELO3C020290.2 Cucumis melo HOM05D006437 ORTHO05D007973 5.4e-25 117.5 71 70.4
Hma1.2p1_0832F.1_g225650 Hydrangea macrophylla HOM05D006437 ORTHO05D007973 5.4e-25 117.5 70 68.6
Nn4g24140 Nelumbo nucifera HOM05D006437 ORTHO05D007973 5.4e-25 117.5 71 70.4
SalBow7G1639 Salvia bowleyana HOM05D006437 ORTHO05D007973 5.4e-25 117.5 80 62.5
Sed0002962 Sechium edule HOM05D006437 ORTHO05D007973 5.4e-25 117.5 71 69.0
Lj6g0018768 Lotus japonicus HOM05D006437 ORTHO05D007973 7.1e-25 117.1 71 69.0
Pp3c23_9530 Physcomitrium patens HOM05D006437 ORTHO05D007973 7.1e-25 117.1 74 68.9
ClCG05G010950 Citrullus lanatus HOM05D006437 ORTHO05D007973 1.6e-24 115.9 71 67.6
Migut.L00468 Erythranthe guttata HOM05D006437 ORTHO05D007973 1.6e-24 115.9 71 70.4
Eucgr.F02822 Eucalyptus grandis HOM05D006437 ORTHO05D007973 1.6e-24 115.9 71 70.4
FvH4_5g32381 Fragaria vesca HOM05D006437 ORTHO05D007973 1.6e-24 115.9 66 77.3
Lalb_Chr10g0104491 Lupinus albus HOM05D006437 ORTHO05D007973 1.6e-24 115.9 71 70.4
Solyc02g091390.3 Solanum lycopersicum HOM05D006437 ORTHO05D007973 1.6e-24 115.9 71 66.2
Sopen02g036010 Solanum pennellii HOM05D006437 ORTHO05D007973 1.6e-24 115.9 71 66.2
PGSC0003DMG400030646 Solanum tuberosum HOM05D006437 ORTHO05D007973 1.6e-24 115.9 71 66.2
AL288U10020 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 2.1e-24 115.5 73 72.6
PSO017G3771 Papaver somniferum HOM05D006437 ORTHO05D007973 2.1e-24 115.5 69 72.5
PSO478G0303 Papaver somniferum HOM05D006437 ORTHO05D007973 2.1e-24 115.5 69 72.5
Nitab4.5_0004399g0060 Nicotiana tabacum HOM05D006437 ORTHO05D007973 2.7e-24 115.2 71 66.2
Glyma.11G218400 Glycine max HOM05D006437 ORTHO05D007973 3.5e-24 114.8 71 67.6
Manes.02G074600 Manihot esculenta HOM05D006437 ORTHO05D007973 3.5e-24 114.8 71 66.2
Pp3c19_5460 Physcomitrium patens HOM05D006437 ORTHO05D007973 3.5e-24 114.8 74 66.2
Pp3c19_5500 Physcomitrium patens HOM05D006437 ORTHO05D007973 3.5e-24 114.8 74 66.2
Glyma.18G038851 Glycine max HOM05D006437 ORTHO05D007973 4.6e-24 114.4 71 67.6
Pp3c19_9840 Physcomitrium patens HOM05D006437 ORTHO05D007973 4.6e-24 114.4 74 64.9
Mapoly0046s0058 Marchantia polymorpha HOM05D006437 ORTHO05D007973 6.0e-24 114.0 71 66.2
Thecc.04G121100 Theobroma cacao HOM05D006437 ORTHO05D007973 6.0e-24 114.0 69 69.6
Cc07_g08170 Coffea canephora HOM05D006437 ORTHO05D007973 7.8e-24 113.6 71 67.6
Mapoly0046s0059 Marchantia polymorpha HOM05D006437 ORTHO05D007973 7.8e-24 113.6 71 67.6
Pp3c21_13210 Physcomitrium patens HOM05D006437 ORTHO05D007973 7.8e-24 113.6 74 66.2
SMO111G0099 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 7.8e-24 113.6 71 69.0
Pp3c24_9690 Physcomitrium patens HOM05D006437 ORTHO05D007973 1.3e-23 112.8 71 66.2
FAN20G1691 Fragaria x ananassa HOM05D006874 ORTHO05D008334 3.0e-23 111.7 62 75.8
PGR042G3666 Punica granatum HOM05D006437 ORTHO05D007973 3.0e-23 111.7 71 67.6
Pp3c8_12730 Physcomitrium patens HOM05D006437 ORTHO05D007973 1.5e-22 109.4 71 64.8
Pp3c8_12731 Physcomitrium patens HOM05D006437 ORTHO05D007973 1.5e-22 109.4 71 64.8
SMO293G0011 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 2.5e-22 108.6 71 64.8
CsaV3_1G027840 Cucumis sativus L. HOM05D006437 ORTHO05D007973 4.3e-22 107.8 64 67.2
CsaV3_3G021640 Cucumis sativus L. HOM05D006437 ORTHO05D007973 4.3e-22 107.8 64 67.2
Lalb_Chr10g0104501 Lupinus albus HOM05D006437 ORTHO05D007973 4.3e-22 107.8 72 65.3
Prupe.3G158900 Prunus persica HOM05D006437 ORTHO05D007973 4.3e-22 107.8 61 73.8
SMO111G0160 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 5.6e-22 107.5 88 55.7
SMO111G0173 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 5.6e-22 107.5 88 55.7
SMO111G0149 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 4.7e-21 104.4 89 55.1
MELO3C020291.2 Cucumis melo HOM05D006437 ORTHO05D007973 1.8e-20 102.4 71 64.8
Aqoxy7G00636 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 3.1e-20 101.7 61 73.8
Pp3c4_12160 Physcomitrium patens HOM05D006437 ORTHO05D007973 3.1e-20 101.7 71 59.2
Rhsim08G0086000 Rhododendron simsii HOM05D006437 ORTHO05D007973 1.5e-19 99.4 61 72.1
SEGI_20637 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 1.5e-19 99.4 69 59.4
SEGI_27045 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 1.5e-19 99.4 69 59.4
TAR371G0835 Trochodendron aralioides HOM05D006437 ORTHO05D007973 7.6e-19 97.1 58 69.0
Peaxi162Scf00118g00018 Petunia axillaris HOM05D006437 ORTHO05D007973 6.4e-18 94.0 68 64.7
Mapoly0009s0147 Marchantia polymorpha HOM05D006437 ORTHO05D007973 4.2e-17 91.3 69 52.2
TAR371G0317 Trochodendron aralioides HOM05D006437 ORTHO05D007973 1.2e-16 89.7 51 72.5
SEGI_23307 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 1.5e-14 82.8 58 62.1
Cre03.g207152 Chlamydomonas reinhardtii HOM05D006437 ORTHO05D007973 5.1e-07 57.8 69 39.1
Aa31LG11G12180 Aethionema arabicum HOM05D002536 ORTHO05D008091 4.3e-06 54.7 25 88.0
Cre13.g575701 Chlamydomonas reinhardtii HOM05D006437 ORTHO05D007973 4.3e-06 54.7 69 36.2
Cre03.g207100 Chlamydomonas reinhardtii HOM05D006437 ORTHO05D007973 9.6e-06 53.5 90 31.1


User provided reference genes

Program Settings