Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10015074m.g Eutrema salsugineum HOM05D007196 ORTHO05D009100 1.0e-57 226.5 110 100.0
Sp6g13940 Schrenkiella parvula HOM05D007196 ORTHO05D009100 6.3e-52 207.2 110 90.0
BcaC04g20641 Brassica carinata HOM05D007196 ORTHO05D009100 1.4e-51 206.1 110 90.0
C09p41140 Brassica napus HOM05D007196 ORTHO05D009100 1.4e-51 206.1 110 90.0
BolC9t56992H Brassica oleracea HOM05D007196 ORTHO05D009100 1.4e-51 206.1 110 90.0
BcaB08g35520 Brassica carinata HOM05D007196 ORTHO05D009100 2.7e-50 201.8 110 88.2
A10p09580 Brassica napus HOM05D007196 ORTHO05D009100 4.5e-50 201.1 110 89.1
BraA10t43033Z Brassica rapa HOM05D007196 ORTHO05D009100 1.7e-49 199.1 110 88.2
AL8G25980 Arabidopsis lyrata HOM05D007196 ORTHO05D009100 1.8e-46 189.1 111 83.8
CARHR264580 Cardamine hirsuta HOM05D007196 ORTHO05D009100 4.0e-46 188.0 111 84.7
AT5G51720 Arabidopsis thaliana HOM05D007196 ORTHO05D009100 1.5e-45 186.0 111 82.9
Carub.0008s1174 Capsella rubella HOM05D007196 ORTHO05D009100 1.0e-41 173.3 110 77.3
THA.LOC104811505 Tarenaya hassleriana HOM05D007196 ORTHO05D009100 9.8e-37 156.8 111 73.0
Cpa.g.sc3.256 Carica papaya HOM05D007196 ORTHO05D009100 2.1e-34 149.1 111 67.6
ECA238G2893 Erigeron canadensis HOM05D007196 ORTHO05D009100 2.5e-32 142.1 109 68.8
Psat1g109280 Pisum sativum HOM05D007196 ORTHO05D009100 1.2e-31 139.8 81 77.8
AUR62016084 Chenopodium quinoa HOM05D007196 ORTHO05D009100 2.1e-31 139.0 82 80.5
arahy.Tifrunner.gnm1.ann1.S0TT2Y Arachis hypogaea HOM05D007196 ORTHO05D009100 3.6e-31 138.3 81 79.0
EL10Ac3g05770 Beta vulgaris HOM05D007196 ORTHO05D009100 4.7e-31 137.9 82 79.3
AUR62021293 Chenopodium quinoa HOM05D007196 ORTHO05D009100 4.7e-31 137.9 82 79.3
CiPaw.03G098100 Carya illinoinensis HOM05D007196 ORTHO05D009100 8.1e-31 137.1 87 78.2
TAR375G0687 Trochodendron aralioides HOM05D007196 ORTHO05D009100 1.1e-30 136.7 116 62.9
Cfa008239 Carpinus fangiana HOM05D007196 ORTHO05D009100 2.3e-30 135.6 79 82.3
Medtr0050s0180 Medicago truncatula HOM05D007196 ORTHO05D009100 2.3e-30 135.6 79 75.9
Lsat_1_v5_gn_2_129760 Lactuca sativa HOM05D007196 ORTHO05D009100 3.1e-30 135.2 78 79.5
Thecc.03G163500 Theobroma cacao HOM05D007196 ORTHO05D009100 3.1e-30 135.2 122 62.3
TPR.G27717 Trifolium pratense HOM05D007196 ORTHO05D009100 4.0e-30 134.8 80 73.8
vmacro06759 Vaccinium macrocarpon HOM05D007196 ORTHO05D009100 4.0e-30 134.8 111 67.6
CSS0025032 Camellia sinensis var. sinensis HOM05D007196 ORTHO05D009100 5.2e-30 134.4 113 62.8
HanXRQChr07g0206311 Helianthus annuus HOM05D007196 ORTHO05D009100 5.2e-30 134.4 79 81.0
MELO3C005405.2 Cucumis melo HOM05D007196 ORTHO05D009100 6.8e-30 134.0 106 62.3
Glyma.09G152100 Glycine max HOM05D007196 ORTHO05D009100 1.2e-29 133.3 116 61.2
Prupe.2G283900 Prunus persica HOM05D007196 ORTHO05D009100 1.2e-29 133.3 105 67.6
Duzib205G1842 Durio zibethinus HOM05D007196 ORTHO05D009100 1.5e-29 132.9 120 61.7
COL.COLO4_14199 Corchorus olitorius HOM05D007196 ORTHO05D009100 2.6e-29 132.1 119 58.8
CsaV3_5G005490 Cucumis sativus L. HOM05D007196 ORTHO05D009100 2.6e-29 132.1 79 78.5
Glyma.16G203100 Glycine max HOM05D007196 ORTHO05D009100 2.6e-29 132.1 113 60.2
Lj2g0025497 Lotus japonicus HOM05D007196 ORTHO05D009100 3.4e-29 131.7 116 60.3
Lalb_Chr19g0131261 Lupinus albus HOM05D007196 ORTHO05D009100 3.4e-29 131.7 84 75.0
Rhsim03G0172900 Rhododendron simsii HOM05D007196 ORTHO05D009100 3.4e-29 131.7 106 67.0
DCAR_018131 Daucus carota HOM05D007196 ORTHO05D009100 4.4e-29 131.3 108 63.9
Sed0001882 Sechium edule HOM05D007196 ORTHO05D009100 5.8e-29 131.0 75 82.7
Ciclev10006560m.g Citrus clementina HOM05D007196 ORTHO05D009100 7.5e-29 130.6 81 77.8
Duzib068G1365 Durio zibethinus HOM05D007196 ORTHO05D009100 7.5e-29 130.6 122 58.2
Duzib205G0862 Durio zibethinus HOM05D007196 ORTHO05D009100 7.5e-29 130.6 120 60.8
Manes.14G032200 Manihot esculenta HOM05D007196 ORTHO05D009100 7.5e-29 130.6 110 59.1
Gohir.D11G007600 Gossypium hirsutum HOM05D007196 ORTHO05D009100 9.9e-29 130.2 120 60.0
Gorai.007G009100 Gossypium raimondii HOM05D007196 ORTHO05D009100 1.7e-28 129.4 84 78.6
Gohir.A11G008400 Gossypium hirsutum HOM05D007196 ORTHO05D009100 2.9e-28 128.6 120 59.2
Actinidia13526 Actinidia chinensis HOM05D007196 ORTHO05D009100 3.7e-28 128.3 112 62.5
ClCG01G005210 Citrullus lanatus HOM05D007196 ORTHO05D009100 3.7e-28 128.3 78 74.4
Potri.015G132500 Populus trichocarpa HOM05D007196 ORTHO05D009100 3.7e-28 128.3 80 76.2
MD01G1187500 Malus domestica HOM05D007196 ORTHO05D009100 6.4e-28 127.5 109 64.2
Os07g0467200 Oryza sativa ssp. japonica HOM05D007196 ORTHO05D009100 8.3e-28 127.1 106 61.3
Potri.012G130600 Populus trichocarpa HOM05D007196 ORTHO05D009100 8.3e-28 127.1 108 61.1
Sabra12G0098300 Salix brachista HOM05D007196 ORTHO05D009100 8.3e-28 127.1 78 76.9
Dinv08000 Davidia involucrata HOM05D007196 ORTHO05D009100 1.1e-27 126.7 81 74.1
Migut.F00414 Erythranthe guttata HOM05D007196 ORTHO05D009100 1.1e-27 126.7 109 59.6
CANSAT21G1841 Cannabis sativa HOM05D007196 ORTHO05D009100 1.4e-27 126.3 82 70.7
CAN.G1481.5 Capsicum annuum HOM05D007196 ORTHO05D009100 1.4e-27 126.3 80 73.8
Nitab4.5_0003984g0020 Nicotiana tabacum HOM05D007196 ORTHO05D009100 1.4e-27 126.3 81 74.1
Atru.chr1.612 Acer truncatum HOM05D007196 ORTHO05D009100 1.9e-27 125.9 110 56.4
Cc02_g03760 Coffea canephora HOM05D007196 ORTHO05D009100 1.9e-27 125.9 101 63.4
FAN06G1802 Fragaria x ananassa HOM05D007196 ORTHO05D009100 1.9e-27 125.9 80 75.0
FAN06G4298 Fragaria x ananassa HOM05D007196 ORTHO05D009100 1.9e-27 125.9 80 75.0
Peaxi162Scf00192g00828 Petunia axillaris HOM05D007196 ORTHO05D009100 1.9e-27 125.9 81 75.3
RcHm_v2.0_Chr1g0375291 Rosa chinensis HOM05D007196 ORTHO05D009100 2.4e-27 125.6 82 74.4
Eucgr.K00137 Eucalyptus grandis HOM05D007196 ORTHO05D009100 3.2e-27 125.2 106 63.2
FvH4_7g28320 Fragaria vesca HOM05D007196 ORTHO05D009100 3.2e-27 125.2 76 80.3
FAN03G0205 Fragaria x ananassa HOM05D007196 ORTHO05D009100 3.2e-27 125.2 76 80.3
FAN10G3863 Fragaria x ananassa HOM05D007196 ORTHO05D009100 3.2e-27 125.2 83 74.7
Phvul.004G125800 Phaseolus vulgaris HOM05D007196 ORTHO05D009100 3.2e-27 125.2 81 72.8
PGSC0003DMG400031014 Solanum tuberosum HOM05D007196 ORTHO05D009100 3.2e-27 125.2 81 72.8
Hma1.2p1_0488F.1_g163760 Hydrangea macrophylla HOM05D007196 ORTHO05D009100 4.1e-27 124.8 116 56.0
Zm00001eb320190 Zea mays HOM05D007196 ORTHO05D009100 9.2e-27 123.6 80 71.2
PSO478G0391 Papaver somniferum HOM05D007196 ORTHO05D009100 1.6e-26 122.9 104 61.5
PGR142G2119 Punica granatum HOM05D007196 ORTHO05D009100 1.6e-26 122.9 80 72.5
SalBow4G2038 Salvia bowleyana HOM05D007196 ORTHO05D009100 1.6e-26 122.9 110 57.3
Solyc03g007030.3 Solanum lycopersicum HOM05D007196 ORTHO05D009100 2.1e-26 122.5 81 70.4
GSVIVG01018482001 Vitis vinifera HOM05D007196 ORTHO05D009100 2.1e-26 122.5 77 75.3
Sopen03g003020 Solanum pennellii HOM05D007196 ORTHO05D009100 3.5e-26 121.7 81 70.4
unitig_52.g17755 Utricularia gibba HOM05D007196 ORTHO05D009100 3.5e-26 121.7 80 70.0
HPP92_007351 Vanilla planifolia HOM05D007196 ORTHO05D009100 6.0e-26 120.9 80 70.0
TWI14G0139 Tripterygium wilfordii HOM05D007196 ORTHO05D009100 1.7e-25 119.4 107 57.9
MBI12_g21133_MAGBIO Magnolia biondii HOM05D007196 ORTHO05D009100 3.0e-25 118.6 73 76.7
CDE11G1107 Ceratophyllum demersum HOM05D007196 ORTHO05D009100 6.6e-25 117.5 109 53.2
QL12p039322 Quercus lobata HOM05D007196 ORTHO05D009100 6.6e-25 117.5 112 58.0
Aqoxy7G00560 Aquilegia oxysepala HOM05D007196 ORTHO05D009100 8.6e-25 117.1 73 76.7
TWI23G0806 Tripterygium wilfordii HOM05D007196 ORTHO05D009100 1.1e-24 116.7 79 68.4
Cc00_g08970 Coffea canephora HOM05D007196 ORTHO05D009100 1.5e-24 116.3 108 59.3
SMO367G0606 Selaginella moellendorffii HOM05D003621 ORTHO05D004259 4.3e-24 114.8 62 80.6
Mapoly0132s0038 Marchantia polymorpha HOM05D007196 ORTHO05D009100 5.6e-24 114.4 70 74.3
CDE02G2935 Ceratophyllum demersum HOM05D007196 ORTHO05D009100 7.3e-24 114.0 111 50.5
SEGI_24908 Sequoiadendron giganteum HOM05D007196 ORTHO05D009100 1.6e-23 112.8 86 65.1
AagrBONN_evm.TU.Sc2ySwM_117.3845 Anthoceros agrestis HOM05D007196 ORTHO05D009100 2.8e-23 112.1 62 79.0
AUR62023670 Chenopodium quinoa HOM05D007196 ORTHO05D001134 1.4e-22 109.8 64 79.7
Pp3c24_720 Physcomitrium patens HOM05D007196 ORTHO05D009100 1.4e-22 109.8 91 59.3
PSO782G2298 Papaver somniferum HOM05D007196 ORTHO05D009100 3.1e-22 108.6 98 57.1
Pp3c23_14000 Physcomitrium patens HOM05D007196 ORTHO05D009100 3.1e-22 108.6 91 58.2
CBR_g49669 Chara braunii HOM05D007196 ORTHO05D009100 1.4e-19 99.8 99 51.5
Cre01.g050550 Chlamydomonas reinhardtii HOM05D007196 ORTHO05D009100 2.1e-18 95.9 61 67.2
PGSC0003DMG400019391 Solanum tuberosum HOM05D007196 ORTHO05D009100 2.1e-18 95.9 81 59.3
CAN.G1135.2 Capsicum annuum HOM05D007196 ORTHO05D009100 2.7e-18 95.5 86 59.3
Haze_26518 Corylus avellana HOM05D007196 ORTHO05D009100 7.6e-13 77.4 109 39.4
Dinv28524 Davidia involucrata HOM05D007196 ORTHO05D009100 1.6e-10 69.7 53 62.3
Haze_13814 Corylus avellana HOM05D007196 ORTHO05D009100 2.5e-08 62.4 60 60.0
Cc05_g04470 Coffea canephora HOM05D007196 ORTHO05D009100 5.6e-08 61.2 28 92.9
FAN03G1444 Fragaria x ananassa HOM05D000077 ORTHO05D000981 1.8e-06 56.2 67 53.7
Nn4g26452 Nelumbo nucifera HOM05D007196 ORTHO05D009100 2.4e-06 55.8 45 64.4
VMungo0464G1496 Vigna mungo HOM05D007196 ORTHO05D009100 5.3e-06 54.7 48 58.3


User provided reference genes

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