Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10015071m.g Eutrema salsugineum HOM05D006906 ORTHO05D008578 4.0e-54 214.5 110 100.0
BcaB08g36735 Brassica carinata HOM05D006906 ORTHO05D008578 1.3e-49 199.5 109 92.7
C09p59250 Brassica napus HOM05D006906 ORTHO05D008578 2.9e-49 198.4 109 89.9
BolC9t58765H Brassica oleracea HOM05D006906 ORTHO05D008578 3.8e-49 198.0 109 90.8
BcaC04g18752 Brassica carinata HOM05D006906 ORTHO05D008578 4.3e-48 194.5 109 89.9
A10p21600 Brassica napus HOM05D006906 ORTHO05D008578 1.2e-47 193.0 109 89.0
Sp6g26380 Schrenkiella parvula HOM05D006906 ORTHO05D008578 1.6e-47 192.6 112 92.0
BraA10t44222Z Brassica rapa HOM05D006906 ORTHO05D008578 2.8e-47 191.8 109 88.1
CARHR195300 Cardamine hirsuta HOM05D006906 ORTHO05D008578 1.0e-46 189.9 110 88.2
AT5G17870 Arabidopsis thaliana HOM05D006906 ORTHO05D008578 1.4e-46 189.5 110 90.0
AL6G28970 Arabidopsis lyrata HOM05D006906 ORTHO05D008578 2.3e-46 188.7 110 89.1
Carub.0006s1610 Capsella rubella HOM05D006906 ORTHO05D008578 1.5e-45 186.0 111 89.2
BcaB01g05160 Brassica carinata HOM05D006906 ORTHO05D008578 2.0e-45 185.7 113 86.7
BolC3t13482H Brassica oleracea HOM05D006906 ORTHO05D008578 2.0e-45 185.7 113 86.7
C03p09940 Brassica napus HOM05D006906 ORTHO05D008578 7.5e-45 183.7 112 86.6
BcaB01g04920 Brassica carinata HOM05D006906 ORTHO05D008578 9.8e-45 183.3 113 85.0
BraA03t10177Z Brassica rapa HOM05D006906 ORTHO05D008578 9.8e-45 183.3 113 85.8
BcaC03g13555 Brassica carinata HOM05D006906 ORTHO05D008578 2.9e-44 181.8 109 86.2
BraA02t05416Z Brassica rapa HOM05D006906 ORTHO05D008578 2.9e-44 181.8 108 88.0
A02p04550 Brassica napus HOM05D006906 ORTHO05D008578 3.7e-44 181.4 108 86.1
BolC2t06848H Brassica oleracea HOM05D006906 ORTHO05D008578 1.1e-43 179.9 109 84.4
BcaC04g18751 Brassica carinata HOM05D006906 ORTHO05D008578 1.8e-38 162.5 109 81.7
C09p59230 Brassica napus HOM05D006906 ORTHO05D008578 1.8e-38 162.5 109 81.7
BolC9t58763H Brassica oleracea HOM05D006906 ORTHO05D008578 2.1e-34 149.1 92 84.8
Aa31LG11G11710 Aethionema arabicum HOM05D006906 ORTHO05D008578 6.6e-33 144.1 112 72.3
A03p08530 Brassica napus HOM05D006906 ORTHO05D008578 3.1e-30 135.2 113 69.0
BcaB05g23287 Brassica carinata HOM05D006906 ORTHO05D008578 1.0e-25 120.2 109 65.1
CSS0004987 Camellia sinensis var. sinensis HOM05D006906 ORTHO05D008578 7.3e-24 114.0 99 62.6
THA.LOC104806946 Tarenaya hassleriana HOM05D006906 ORTHO05D008578 9.5e-24 113.6 106 60.4
Prupe.1G543500 Prunus persica HOM05D006906 ORTHO05D008578 1.2e-23 113.2 109 56.9
MD08G1211600 Malus domestica HOM05D006906 ORTHO05D008578 1.6e-23 112.8 113 59.3
Manes.18G052450 Manihot esculenta HOM05D006906 ORTHO05D008578 2.1e-23 112.5 107 57.9
Cfa020715 Carpinus fangiana HOM05D006906 ORTHO05D008578 4.7e-23 111.3 101 56.4
Actinidia19594 Actinidia chinensis HOM05D006906 ORTHO05D008578 6.2e-23 110.9 92 63.0
Haze_19024 Corylus avellana HOM05D006906 ORTHO05D008578 1.8e-22 109.4 100 56.0
Thhalv10009816m.g Eutrema salsugineum HOM05D006906 ORTHO05D008578 1.8e-22 109.4 69 79.7
Potri.002G112500 Populus trichocarpa HOM05D006906 ORTHO05D008578 1.8e-22 109.4 98 60.2
TAR628G1359 Trochodendron aralioides HOM05D006906 ORTHO05D008578 2.4e-22 109.0 100 53.0
RcHm_v2.0_Chr7g0232161 Rosa chinensis HOM05D006906 ORTHO05D008578 3.1e-22 108.6 88 65.9
EL10Ac1g02326 Beta vulgaris HOM05D006906 ORTHO05D008578 4.0e-22 108.2 91 61.5
Sabra02G0088700 Salix brachista HOM05D006906 ORTHO05D008578 4.0e-22 108.2 109 56.9
Hma1.2p1_1068F.1_g254010 Hydrangea macrophylla HOM05D006906 ORTHO05D008578 6.8e-22 107.5 107 57.9
Ah.05g166860 Amaranthus hybridus HOM05D006906 ORTHO05D008578 8.9e-22 107.1 108 55.6
Aqoxy6G01513 Aquilegia oxysepala HOM05D006906 ORTHO05D008578 8.9e-22 107.1 108 54.6
SGA_v2.0_scaffold152G36871 Striga asiatica HOM05D006906 ORTHO05D008578 8.9e-22 107.1 105 57.1
MD15G1394500 Malus domestica HOM05D006906 ORTHO05D008578 1.2e-21 106.7 113 54.0
Dinv01221 Davidia involucrata HOM05D006906 ORTHO05D008578 2.0e-21 105.9 107 56.1
Rhsim07G0215600 Rhododendron simsii HOM05D006906 ORTHO05D008578 2.6e-21 105.5 88 61.4
Ciclev10002778m.g Citrus clementina HOM05D006906 ORTHO05D008578 4.4e-21 104.8 109 55.0
QL12p040639 Quercus lobata HOM05D006906 ORTHO05D008578 7.6e-21 104.0 101 55.4
vmacro04612 Vaccinium macrocarpon HOM05D006906 ORTHO05D008578 7.6e-21 104.0 93 58.1
CANSAT01G2303 Cannabis sativa HOM05D006906 ORTHO05D008578 9.9e-21 103.6 108 55.6
CiPaw.15G153800 Carya illinoinensis HOM05D006906 ORTHO05D008578 9.9e-21 103.6 105 53.3
Gohir.A05G213900 Gossypium hirsutum HOM05D006906 ORTHO05D008578 1.3e-20 103.2 80 62.5
Gorai.009G224100 Gossypium raimondii HOM05D006906 ORTHO05D008578 2.2e-20 102.4 80 62.5
Eucgr.F00111 Eucalyptus grandis HOM05D006906 ORTHO05D008578 2.9e-20 102.1 85 60.0
FvH4_5g33440 Fragaria vesca HOM05D006906 ORTHO05D008578 2.9e-20 102.1 70 72.9
FAN08G0950 Fragaria x ananassa HOM05D006906 ORTHO05D008578 2.9e-20 102.1 70 72.9
FAN18G0347 Fragaria x ananassa HOM05D006906 ORTHO05D008578 2.9e-20 102.1 70 72.9
Duzib116G0588 Durio zibethinus HOM05D006906 ORTHO05D008578 3.8e-20 101.7 76 61.8
TWI56G0746 Tripterygium wilfordii HOM05D006906 ORTHO05D008578 3.8e-20 101.7 111 49.5
Duzib116G0218 Durio zibethinus HOM05D006906 ORTHO05D008578 6.4e-20 100.9 76 61.8
Sc26g0004280 Simmondsia chinensis HOM05D006906 ORTHO05D008578 6.4e-20 100.9 94 59.6
Atru.chr13.910 Acer truncatum HOM05D006906 ORTHO05D008578 8.4e-20 100.5 107 54.2
Gohir.D05G217300 Gossypium hirsutum HOM05D006906 ORTHO05D008578 8.4e-20 100.5 80 61.2
HanXRQChr16g0510751 Helianthus annuus HOM05D006906 ORTHO05D008578 8.4e-20 100.5 83 61.4
HanXRQChr16g0510761 Helianthus annuus HOM05D006906 ORTHO05D008578 8.4e-20 100.5 83 61.4
PGR031G1810 Punica granatum HOM05D006906 ORTHO05D008578 1.1e-19 100.1 97 54.6
Thecc.08G080900 Theobroma cacao HOM05D006906 ORTHO05D008578 1.9e-19 99.4 97 52.6
Sed0015154 Sechium edule HOM05D006906 ORTHO05D008578 3.2e-19 98.6 99 52.5
Duzib093G2206 Durio zibethinus HOM05D006906 ORTHO05D008578 4.1e-19 98.2 94 55.3
ClCG11G014950 Citrullus lanatus HOM05D006906 ORTHO05D008578 5.4e-19 97.8 98 53.1
AUR62034964 Chenopodium quinoa HOM05D006906 ORTHO05D008578 1.6e-18 96.3 91 52.7
MBI16_g41120_MAGBIO Magnolia biondii HOM05D006906 ORTHO05D008578 1.6e-18 96.3 105 51.4
Prupe.3G080900 Prunus persica HOM05D006906 ORTHO05D008578 1.6e-18 96.3 70 65.7
CDE01G0046 Ceratophyllum demersum HOM05D006906 ORTHO05D008578 2.7e-18 95.5 47 89.4
Cpa.g.sc160.12 Carica papaya HOM05D006906 ORTHO05D008578 3.5e-18 95.1 102 52.9
COL.COLO4_35364 Corchorus olitorius HOM05D006906 ORTHO05D008578 3.5e-18 95.1 68 67.6
Phvul.009G113500 Phaseolus vulgaris HOM05D006906 ORTHO05D008578 4.6e-18 94.7 99 53.5
PGSC0003DMG400004936 Solanum tuberosum HOM05D006906 ORTHO05D008578 6.0e-18 94.4 109 51.4
DCAR_012832 Daucus carota HOM05D006906 ORTHO05D008578 7.8e-18 94.0 109 50.5
Lsat_1_v5_gn_6_108161 Lactuca sativa HOM05D006906 ORTHO05D008578 7.8e-18 94.0 112 48.2
Solyc04g077130.1 Solanum lycopersicum HOM05D006906 ORTHO05D008578 7.8e-18 94.0 109 52.3
MELO3C003483.2 Cucumis melo HOM05D006906 ORTHO05D008578 1.0e-17 93.6 109 49.5
TWI12G0785 Tripterygium wilfordii HOM05D006906 ORTHO05D008578 1.0e-17 93.6 115 46.1
CAN.G416.50 Capsicum annuum HOM05D006906 ORTHO05D008578 3.0e-17 92.0 112 49.1
Glyma.06G089700 Glycine max HOM05D006906 ORTHO05D008578 3.9e-17 91.7 98 52.0
MSTRG.17420 Avicennia marina HOM05D006906 ORTHO05D008578 5.1e-17 91.3 103 55.3
Nitab4.5_0002415g0040 Nicotiana tabacum HOM05D006906 ORTHO05D008578 5.1e-17 91.3 118 49.2
Sopen04g030750 Solanum pennellii HOM05D006906 ORTHO05D008578 6.6e-17 90.9 105 50.5
AUR62035774 Chenopodium quinoa HOM05D006906 ORTHO05D008578 1.1e-16 90.1 94 50.0
Psat1g221800 Pisum sativum HOM05D006906 ORTHO05D008578 1.1e-16 90.1 81 60.5
Os11g0550800 Oryza sativa ssp. japonica HOM05D006906 ORTHO05D008578 3.3e-16 88.6 67 61.2
Prupe.8G111300 Prunus persica HOM05D006906 ORTHO05D008578 4.3e-16 88.2 69 62.3
Peaxi162Scf00628g00053 Petunia axillaris HOM05D006906 ORTHO05D008578 5.6e-16 87.8 67 62.7
TPR.G12407 Trifolium pratense HOM05D006906 ORTHO05D008578 5.6e-16 87.8 89 53.9
Nn5g30714 Nelumbo nucifera HOM05D006906 ORTHO05D008578 1.2e-15 86.7 90 54.4
unitig_21.g20623 Utricularia gibba HOM05D006906 ORTHO05D008578 1.6e-15 86.3 86 55.8
ECA246G4410 Erigeron canadensis HOM05D006906 ORTHO05D008578 2.1e-15 85.9 97 50.5
Medtr3g110640 Medicago truncatula HOM05D006906 ORTHO05D008578 2.8e-15 85.5 99 50.5
PSO675G4379 Papaver somniferum HOM05D006906 ORTHO05D008578 2.8e-15 85.5 91 52.7
ATR0767G231 Amborella trichopoda HOM05D006906 ORTHO05D008578 3.6e-15 85.1 47 76.6
Nitab4.5_0001614g0100 Nicotiana tabacum HOM05D006906 ORTHO05D008578 4.7e-15 84.7 66 60.6
PSO541G5790 Papaver somniferum HOM05D006906 ORTHO05D008578 4.7e-15 84.7 91 53.8
SalBow2G0068 Salvia bowleyana HOM05D006906 ORTHO05D008578 3.1e-14 82.0 101 48.5
Migut.N02816 Erythranthe guttata HOM05D006906 ORTHO05D008578 7.6e-13 77.4 82 53.7
HPP92_027715 Vanilla planifolia HOM05D006906 ORTHO05D008578 7.1e-11 70.9 39 87.2
HPP92_027718 Vanilla planifolia HOM05D006906 ORTHO05D008578 7.1e-11 70.9 39 87.2
Manes.05G185700 Manihot esculenta HOM05D006906 ORTHO05D008578 2.7e-10 68.9 109 42.2
CBR_g48804 Chara braunii HOM05D006906 ORTHO05D008578 1.0e-09 67.0 89 42.7
Mapoly0090s0093 Marchantia polymorpha HOM05D006906 ORTHO05D008578 6.6e-09 64.3 61 57.4
Pp3c3_11690 Physcomitrium patens HOM05D006906 ORTHO05D008578 7.3e-08 60.8 73 53.4
SEGI_12109 Sequoiadendron giganteum HOM05D006906 ORTHO05D008578 2.1e-07 59.3 45 64.4


User provided reference genes

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