Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10015034m.g Eutrema salsugineum HOM05D004155 ORTHO05D004837 4.1e-60 234.6 122 100.0
Thhalv10014511m.g Eutrema salsugineum HOM05D004155 ORTHO05D004837 5.1e-42 174.5 93 93.5
Sp6g26670 Schrenkiella parvula HOM05D004155 ORTHO05D004837 5.8e-38 161.0 93 88.2
BcaB08g36763 Brassica carinata HOM05D004155 ORTHO05D004837 2.9e-37 158.7 95 86.3
A10p21850 Brassica napus HOM05D004155 ORTHO05D004837 3.7e-37 158.3 97 85.6
AL6G28640 Arabidopsis lyrata HOM05D004155 ORTHO05D004837 1.4e-36 156.4 92 87.0
AT5G17550 Arabidopsis thaliana HOM05D004155 ORTHO05D004837 1.9e-36 156.0 92 87.0
BolC9t58800H Brassica oleracea HOM05D004155 ORTHO05D004837 1.9e-36 156.0 94 86.2
BcaC04g18780 Brassica carinata HOM05D004155 ORTHO05D004837 7.1e-36 154.1 102 80.4
C09p59610 Brassica napus HOM05D004155 ORTHO05D004837 7.1e-36 154.1 93 86.0
Carub.0006s1579 Capsella rubella HOM05D004155 ORTHO05D004837 1.6e-35 152.9 91 85.7
BraA10t44245Z Brassica rapa HOM05D004155 ORTHO05D004837 1.3e-34 149.8 93 83.9
CARHR195630 Cardamine hirsuta HOM05D004155 ORTHO05D004837 3.0e-34 148.7 94 80.9
Aa31LG11G12130 Aethionema arabicum HOM05D004155 ORTHO05D004837 2.6e-30 135.6 92 77.2
Sp3g02480 Schrenkiella parvula HOM05D004155 ORTHO05D004837 4.9e-29 131.3 96 72.9
CARHR077510 Cardamine hirsuta HOM05D004155 ORTHO05D004837 1.9e-28 129.4 97 69.1
Aa31LG5G14010 Aethionema arabicum HOM05D004155 ORTHO05D004837 4.2e-28 128.3 96 70.8
Carub.0003s0263 Capsella rubella HOM05D004155 ORTHO05D004837 7.1e-28 127.5 104 63.5
Cpa.g.sc43.157 Carica papaya HOM05D004155 ORTHO05D004837 7.1e-28 127.5 104 67.3
THA.LOC104802903 Tarenaya hassleriana HOM05D004155 ORTHO05D004837 2.7e-27 125.6 87 78.2
THA.LOC104820827 Tarenaya hassleriana HOM05D004155 ORTHO05D004837 2.7e-27 125.6 92 71.7
AT3G03490 Arabidopsis thaliana HOM05D004155 ORTHO05D004837 3.5e-27 125.2 85 76.5
AL3G13170 Arabidopsis lyrata HOM05D004155 ORTHO05D004837 6.0e-27 124.4 84 78.6
COL.COLO4_37174 Corchorus olitorius HOM05D004155 ORTHO05D004837 6.0e-27 124.4 104 65.4
Duzib068G1244 Durio zibethinus HOM05D004155 ORTHO05D004837 7.8e-27 124.0 93 68.8
Gohir.A08G170500 Gossypium hirsutum HOM05D004155 ORTHO05D004837 2.3e-26 122.5 94 68.1
Gohir.D08G188700 Gossypium hirsutum HOM05D004155 ORTHO05D004837 2.3e-26 122.5 94 68.1
Gorai.004G198700 Gossypium raimondii HOM05D004155 ORTHO05D004837 2.3e-26 122.5 94 68.1
Duzib136G0003 Durio zibethinus HOM05D004155 ORTHO05D004837 1.5e-25 119.8 89 69.7
Thecc.03G251400 Theobroma cacao HOM05D004155 ORTHO05D004837 1.5e-25 119.8 95 68.4
BraA03t12501Z Brassica rapa HOM05D004155 ORTHO05D004837 1.9e-25 119.4 99 67.7
Glyma.05G059400 Glycine max HOM05D004155 ORTHO05D004837 4.3e-25 118.2 90 66.7
Ciclev10021960m.g Citrus clementina HOM05D004155 ORTHO05D004837 5.6e-25 117.9 86 69.8
VMungo0251G3701 Vigna mungo HOM05D004155 ORTHO05D004837 5.6e-25 117.9 88 68.2
Cfa012719 Carpinus fangiana HOM05D004155 ORTHO05D004837 7.3e-25 117.5 90 67.8
Haze_07913 Corylus avellana HOM05D004155 ORTHO05D004837 7.3e-25 117.5 90 67.8
CsaV3_3G002720 Cucumis sativus L. HOM05D004155 ORTHO05D004837 9.6e-25 117.1 88 65.9
MD06G1058700 Malus domestica HOM05D004155 ORTHO05D004837 1.3e-24 116.7 96 64.6
Psat4g072240 Pisum sativum HOM05D004155 ORTHO05D004837 1.6e-24 116.3 100 60.0
Atru.chr9.1312 Acer truncatum HOM05D004155 ORTHO05D004837 2.1e-24 115.9 89 68.5
ClCG10G002690 Citrullus lanatus HOM05D004155 ORTHO05D004837 2.8e-24 115.5 92 65.2
MELO3C013940.2 Cucumis melo HOM05D004155 ORTHO05D004837 2.8e-24 115.5 94 66.0
Lj2A217G31 Lonicera japonica HOM05D004155 ORTHO05D004837 2.8e-24 115.5 94 63.8
Oeu040215.1 Olea europaea HOM05D004155 ORTHO05D004837 2.8e-24 115.5 109 62.4
Phvul.003G220600 Phaseolus vulgaris HOM05D004155 ORTHO05D004837 2.8e-24 115.5 89 66.3
Medtr4g100930 Medicago truncatula HOM05D004155 ORTHO05D004837 3.6e-24 115.2 100 59.0
Potri.003G077000 Populus trichocarpa HOM05D004155 ORTHO05D004837 3.6e-24 115.2 95 61.1
BcaB04g19367 Brassica carinata HOM05D004155 ORTHO05D004837 4.8e-24 114.8 102 63.7
CiPaw.12G052800 Carya illinoinensis HOM05D004155 ORTHO05D004837 4.8e-24 114.8 100 64.0
Cc08_g12420 Coffea canephora HOM05D004155 ORTHO05D004837 4.8e-24 114.8 91 63.7
GSVIVG01001328001 Vitis vinifera HOM05D004155 ORTHO05D004837 6.2e-24 114.4 88 68.2
QL12p012142 Quercus lobata HOM05D004155 ORTHO05D004837 8.1e-24 114.0 86 66.3
Aqoxy5G03883 Aquilegia oxysepala HOM05D004155 ORTHO05D004837 1.1e-23 113.6 99 61.6
TWI60G0516 Tripterygium wilfordii HOM05D004155 ORTHO05D004837 1.1e-23 113.6 102 60.8
TWI81G0233 Tripterygium wilfordii HOM05D004155 ORTHO05D004837 1.1e-23 113.6 105 59.0
Gohir.A12G217000 Gossypium hirsutum HOM05D004155 ORTHO05D004837 1.4e-23 113.2 101 58.4
Gohir.D12G219500 Gossypium hirsutum HOM05D004155 ORTHO05D004837 1.4e-23 113.2 101 58.4
Gorai.008G235200 Gossypium raimondii HOM05D004155 ORTHO05D004837 1.4e-23 113.2 101 58.4
Lj4g0023659 Lotus japonicus HOM05D004155 ORTHO05D004837 1.4e-23 113.2 89 66.3
Rhsim02G0215900 Rhododendron simsii HOM05D004155 ORTHO05D004837 1.4e-23 113.2 102 56.9
Duzib084G0799 Durio zibethinus HOM05D004155 ORTHO05D004837 1.8e-23 112.8 111 56.8
Dinv21638 Davidia involucrata HOM05D004155 ORTHO05D004837 2.4e-23 112.5 89 64.0
Hma1.2p1_0316F.1_g123160 Hydrangea macrophylla HOM05D004155 ORTHO05D004837 3.1e-23 112.1 94 63.8
FvH4_5g18890 Fragaria vesca HOM05D004155 ORTHO05D004837 4.0e-23 111.7 102 58.8
FAN18G2873 Fragaria x ananassa HOM05D004155 ORTHO05D004837 4.0e-23 111.7 93 60.2
FAN18G3217 Fragaria x ananassa HOM05D004155 ORTHO05D004837 4.0e-23 111.7 93 60.2
FAN18G4261 Fragaria x ananassa HOM05D004155 ORTHO05D004837 4.0e-23 111.7 93 60.2
RcHm_v2.0_Chr7g0203271 Rosa chinensis HOM05D004155 ORTHO05D004837 4.0e-23 111.7 96 60.4
Actinidia22301 Actinidia chinensis HOM05D004155 ORTHO05D004837 5.3e-23 111.3 96 62.5
FAN08G3385 Fragaria x ananassa HOM05D004155 ORTHO05D004837 5.3e-23 111.3 93 60.2
FAN13G1725 Fragaria x ananassa HOM05D004155 ORTHO05D004837 5.3e-23 111.3 93 60.2
Glyma.17G141800 Glycine max HOM05D004155 ORTHO05D004837 6.9e-23 110.9 87 66.7
TPR.G11991 Trifolium pratense HOM05D004155 ORTHO05D004837 6.9e-23 110.9 99 57.6
BcaC01g04400 Brassica carinata HOM05D004155 ORTHO05D004837 9.0e-23 110.5 81 74.1
C03p40540 Brassica napus HOM05D004155 ORTHO05D004837 9.0e-23 110.5 81 74.1
BolC3t16319H Brassica oleracea HOM05D004155 ORTHO05D004837 9.0e-23 110.5 81 74.1
CSS0005110 Camellia sinensis var. sinensis HOM05D004155 ORTHO05D004837 9.0e-23 110.5 105 60.0
CSS0021878 Camellia sinensis var. sinensis HOM05D004155 ORTHO05D004837 9.0e-23 110.5 105 60.0
Ca_21966_v3 Cicer arietinum L. HOM05D004155 ORTHO05D004837 9.0e-23 110.5 111 57.7
Potri.001G157900 Populus trichocarpa HOM05D004155 ORTHO05D004837 9.0e-23 110.5 94 57.4
Prupe.5G069700 Prunus persica HOM05D004155 ORTHO05D004837 9.0e-23 110.5 97 62.9
DCAR_006831 Daucus carota HOM05D004155 ORTHO05D004837 1.2e-22 110.2 98 60.2
FAN04G2128 Fragaria x ananassa HOM05D004155 ORTHO05D004837 1.5e-22 109.8 102 58.8
Sabra03G0047400 Salix brachista HOM05D004155 ORTHO05D004837 1.5e-22 109.8 95 60.0
TAR374G0168 Trochodendron aralioides HOM05D004155 ORTHO05D004837 5.8e-22 107.8 98 59.2
Manes.01G080600 Manihot esculenta HOM05D004155 ORTHO05D004837 7.6e-22 107.5 92 60.9
Oeu026407.1 Olea europaea HOM05D004155 ORTHO05D004837 7.6e-22 107.5 112 58.0
A03p33290 Brassica napus HOM05D004155 ORTHO05D004837 9.9e-22 107.1 80 72.5
Manes.02G039600 Manihot esculenta HOM05D004155 ORTHO05D004837 9.9e-22 107.1 90 64.4
Nn6g33959 Nelumbo nucifera HOM05D004155 ORTHO05D004837 1.3e-21 106.7 92 59.8
TAR374G0401 Trochodendron aralioides HOM05D004155 ORTHO05D004837 1.7e-21 106.3 97 58.8
PGSC0003DMG400011880 Solanum tuberosum HOM05D004155 ORTHO05D004837 2.9e-21 105.5 110 53.6
Sabra01G0133600 Salix brachista HOM05D004155 ORTHO05D004837 4.9e-21 104.8 84 59.5
CANSAT21G0249 Cannabis sativa HOM05D004155 ORTHO05D004837 1.1e-20 103.6 84 63.1
HanXRQChr03g0088551 Helianthus annuus HOM05D004155 ORTHO05D004837 1.4e-20 103.2 100 60.0
arahy.Tifrunner.gnm1.ann1.9Q5ZL0 Arachis hypogaea HOM05D004155 ORTHO05D004837 1.9e-20 102.8 88 62.5
Nitab4.5_0000618g0060 Nicotiana tabacum HOM05D004155 ORTHO05D004837 4.2e-20 101.7 98 54.1
Sopen06g020840 Solanum pennellii HOM05D004155 ORTHO05D004837 4.2e-20 101.7 107 52.3
Peaxi162Scf00174g00143 Petunia axillaris HOM05D004155 ORTHO05D004837 5.4e-20 101.3 93 59.1
Sed0004864 Sechium edule HOM05D004155 ORTHO05D004837 7.1e-20 100.9 94 59.6
arahy.Tifrunner.gnm1.ann1.FN76PE Arachis hypogaea HOM05D004155 ORTHO05D004837 9.3e-20 100.5 88 60.2
Solyc06g060720.3 Solanum lycopersicum HOM05D004155 ORTHO05D004837 1.2e-19 100.1 107 51.4
DCAR_008491 Daucus carota HOM05D004155 ORTHO05D004837 1.6e-19 99.8 105 53.3
SGA_v2.0_scaffold120G32880 Striga asiatica HOM05D004155 ORTHO05D004837 1.6e-19 99.8 94 57.4
CAN.G1058.24 Capsicum annuum HOM05D004155 ORTHO05D004837 2.1e-19 99.4 98 58.2
Lalb_Chr16g0386681 Lupinus albus HOM05D004155 ORTHO05D004837 2.1e-19 99.4 83 65.1
EL10Ac9g21736 Beta vulgaris HOM05D004155 ORTHO05D004837 2.7e-19 99.0 98 52.0
MSTRG.25524 Avicennia marina HOM05D004155 ORTHO05D004837 3.5e-19 98.6 95 60.0
Eucgr.I02746 Eucalyptus grandis HOM05D004155 ORTHO05D004837 4.6e-19 98.2 92 59.8
Lsat_1_v5_gn_6_91040 Lactuca sativa HOM05D004155 ORTHO05D004837 6.0e-19 97.8 94 56.4
MSTRG.12099 Avicennia marina HOM05D004155 ORTHO05D004837 7.9e-19 97.4 107 51.4
Lalb_Chr09g0330111 Lupinus albus HOM05D004155 ORTHO05D004837 1.0e-18 97.1 92 63.0
TAR375G0135 Trochodendron aralioides HOM05D004155 ORTHO05D004837 1.0e-18 97.1 93 55.9
PGR142G3296 Punica granatum HOM05D004155 ORTHO05D004837 1.3e-18 96.7 93 60.2
Sc01g0008440 Simmondsia chinensis HOM05D004155 ORTHO05D004837 1.3e-18 96.7 92 52.2
SalBow5G4949 Salvia bowleyana HOM05D004155 ORTHO05D004837 1.7e-18 96.3 103 56.3
HanXRQChr06g0164361 Helianthus annuus HOM05D004155 ORTHO05D004837 2.3e-18 95.9 94 59.6
Nitab4.5_0005960g0040 Nicotiana tabacum HOM05D004155 ORTHO05D004837 2.3e-18 95.9 102 54.9
PGSC0003DMG400004812 Solanum tuberosum HOM05D004155 ORTHO05D004837 3.9e-18 95.1 102 53.9
SGA_v2.0_scaffold146G36157 Striga asiatica HOM05D004155 ORTHO05D004837 3.9e-18 95.1 92 56.5
Ah.11g040940 Amaranthus hybridus HOM05D004155 ORTHO05D004837 5.1e-18 94.7 93 55.9
Ah.11g040960 Amaranthus hybridus HOM05D004155 ORTHO05D004837 5.1e-18 94.7 93 55.9
Actinidia14427 Actinidia chinensis HOM05D004155 ORTHO05D004837 1.1e-17 93.6 84 57.1
Nitab4.5_0000312g0050 Nicotiana tabacum HOM05D004155 ORTHO05D004837 5.6e-17 91.3 101 51.5
CAN.G62.43 Capsicum annuum HOM05D004155 ORTHO05D004837 9.6e-17 90.5 110 47.3
Migut.A00944 Erythranthe guttata HOM05D004155 ORTHO05D004837 1.3e-16 90.1 101 53.5
PSO063G2044 Papaver somniferum HOM05D004155 ORTHO05D004837 4.8e-16 88.2 107 45.8
arahy.Tifrunner.gnm1.ann1.Z2VGSW Arachis hypogaea HOM05D004155 ORTHO05D004837 6.2e-16 87.8 74 60.8
TPR.G37609 Trifolium pratense HOM05D004155 ORTHO05D004837 6.2e-16 87.8 57 73.7
PSO782G0374 Papaver somniferum HOM05D004155 ORTHO05D004837 1.4e-15 86.7 107 45.8
Nitab4.5_0001076g0090 Nicotiana tabacum HOM05D004155 ORTHO05D004837 1.8e-15 86.3 86 54.7
unitig_37.g12342 Utricularia gibba HOM05D004155 ORTHO05D004837 2.4e-15 85.9 112 44.6
arahy.Tifrunner.gnm1.ann1.BEL5CJ Arachis hypogaea HOM05D004155 ORTHO05D004837 5.3e-15 84.7 74 58.1
CDE11G1226 Ceratophyllum demersum HOM05D004155 ORTHO05D004837 2.6e-14 82.4 106 44.3
MBI04_g09499_MAGBIO Magnolia biondii HOM05D004155 ORTHO05D004837 2.6e-14 82.4 83 54.2
PSO384G2334 Papaver somniferum HOM05D004155 ORTHO05D004837 5.8e-14 81.3 102 49.0
ECA240G3289 Erigeron canadensis HOM05D004155 ORTHO05D004837 1.7e-13 79.7 103 49.5
CDE09G1113 Ceratophyllum demersum HOM05D004155 ORTHO05D004837 1.9e-12 76.3 106 41.5
Nn1g00995 Nelumbo nucifera HOM05D004155 ORTHO05D004837 9.3e-12 73.9 93 48.4
ATR0317G023 Amborella trichopoda HOM05D004155 ORTHO05D004837 1.2e-11 73.6 99 44.4
HPP92_007424 Vanilla planifolia HOM05D004155 ORTHO05D004837 2.1e-11 72.8 83 49.4
Ah.11g040910 Amaranthus hybridus HOM05D004155 ORTHO05D004837 7.9e-11 70.9 89 47.2
PGSC0003DMG400045666 Solanum tuberosum HOM05D004155 ORTHO05D004837 1.0e-10 70.5 81 49.4
ECA247G1153 Erigeron canadensis HOM05D004155 ORTHO05D004837 1.3e-10 70.1 94 50.0
Gorai.003G171500 Gossypium raimondii HOM05D004155 ORTHO05D004837 4.3e-09 65.1 76 48.7
Gohir.D03G162900 Gossypium hirsutum HOM05D004155 ORTHO05D004837 5.6e-09 64.7 65 53.8
Gohir.A03G008100 Gossypium hirsutum HOM05D004155 ORTHO05D004837 9.6e-09 63.9 65 53.8
AUR62016725 Chenopodium quinoa HOM05D004155 ORTHO05D004837 4.0e-07 58.5 102 39.2
SEGI_17945 Sequoiadendron giganteum HOM05D004155 ORTHO05D004837 4.5e-06 55.1 86 43.0


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