Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10015026m.g Eutrema salsugineum HOM05D006291 ORTHO05D007669 3.0e-58 228.4 124 100.0
Sp6g13890 Schrenkiella parvula HOM05D006291 ORTHO05D007669 6.5e-53 210.7 124 91.1
Carub.0013s0004 Capsella rubella HOM05D006291 ORTHO05D007669 1.8e-50 202.6 129 86.8
AT2G07340 Arabidopsis thaliana HOM05D006291 ORTHO05D007669 3.9e-50 201.4 129 85.3
BcaC01g06135 Brassica carinata HOM05D006291 ORTHO05D007669 3.3e-49 198.4 124 86.3
C03p18890 Brassica napus HOM05D006291 ORTHO05D007669 3.3e-49 198.4 124 86.3
A03p16050 Brassica napus HOM05D006291 ORTHO05D007669 9.7e-49 196.8 124 85.5
THA.LOC104826574 Tarenaya hassleriana HOM05D006291 ORTHO05D007669 1.1e-47 193.4 129 82.2
Aa31LG8G11030 Aethionema arabicum HOM05D006291 ORTHO05D007669 1.0e-45 186.8 172 66.3
Duzib128G2031 Durio zibethinus HOM05D006291 ORTHO05D007669 2.9e-45 185.3 128 80.5
GSVIVG01032270001 Vitis vinifera HOM05D006291 ORTHO05D007669 3.8e-45 184.9 128 78.9
Nn8g40626 Nelumbo nucifera HOM05D006291 ORTHO05D007669 6.5e-45 184.1 128 78.9
Duzib128G1629 Durio zibethinus HOM05D006291 ORTHO05D007669 8.5e-45 183.7 128 79.7
Gorai.009G302200 Gossypium raimondii HOM05D006291 ORTHO05D007669 1.1e-44 183.3 131 77.1
COL.COLO4_05650 Corchorus olitorius HOM05D006291 ORTHO05D007669 1.9e-44 182.6 129 79.1
BcaB01g04158 Brassica carinata HOM05D006291 ORTHO05D007669 2.5e-44 182.2 137 75.2
RcHm_v2.0_Chr4g0397141 Rosa chinensis HOM05D006291 ORTHO05D007669 2.5e-44 182.2 128 76.6
Gohir.D05G287200 Gossypium hirsutum HOM05D006291 ORTHO05D007669 3.2e-44 181.8 129 77.5
FAN22G0966 Fragaria x ananassa HOM05D006291 ORTHO05D007669 4.2e-44 181.4 128 76.6
Thecc.10G119800 Theobroma cacao HOM05D006291 ORTHO05D007669 4.2e-44 181.4 123 80.5
MD16G1236600 Malus domestica HOM05D006291 ORTHO05D007669 5.5e-44 181.0 128 77.3
Rhsim01G0107900 Rhododendron simsii HOM05D006291 ORTHO05D007669 5.5e-44 181.0 127 78.7
Aqoxy7G02914 Aquilegia oxysepala HOM05D006291 ORTHO05D007669 7.2e-44 180.6 129 78.3
FAN07G2657 Fragaria x ananassa HOM05D006291 ORTHO05D007669 7.2e-44 180.6 128 75.8
FvH4_4g05950 Fragaria vesca HOM05D006291 ORTHO05D007669 1.2e-43 179.9 128 75.8
Prupe.1G063000 Prunus persica HOM05D006291 ORTHO05D007669 1.2e-43 179.9 128 77.3
CSS0003994 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 2.1e-43 179.1 129 76.7
CSS0013846 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 2.1e-43 179.1 129 76.7
FAN12G2114 Fragaria x ananassa HOM05D006291 ORTHO05D007669 2.1e-43 179.1 130 74.6
Manes.02G198400 Manihot esculenta HOM05D006291 ORTHO05D007669 2.1e-43 179.1 128 75.8
Potri.006G079700 Populus trichocarpa HOM05D006291 ORTHO05D007669 2.1e-43 179.1 128 75.8
MD13G1231800 Malus domestica HOM05D006291 ORTHO05D007669 2.7e-43 178.7 128 75.8
Actinidia02463 Actinidia chinensis HOM05D006291 ORTHO05D007669 3.6e-43 178.3 129 76.7
Actinidia38532 Actinidia chinensis HOM05D006291 ORTHO05D007669 3.6e-43 178.3 128 77.3
Migut.L01922 Erythranthe guttata HOM05D006291 ORTHO05D007669 6.1e-43 177.6 129 75.2
SGA_v2.0_scaffold21G09601 Striga asiatica HOM05D006291 ORTHO05D007669 7.9e-43 177.2 129 75.2
EL10Ac2g03616 Beta vulgaris HOM05D006291 ORTHO05D007669 1.0e-42 176.8 128 75.8
PSO170G1648 Papaver somniferum HOM05D006291 ORTHO05D007669 1.4e-42 176.4 129 75.2
PGR044G0028 Punica granatum HOM05D006291 ORTHO05D007669 1.8e-42 176.0 128 75.0
TAR362G0416 Trochodendron aralioides HOM05D006291 ORTHO05D007669 1.8e-42 176.0 128 75.0
CiPaw.16G104700 Carya illinoinensis HOM05D006291 ORTHO05D007669 3.0e-42 175.3 128 75.8
PSO063G7114 Papaver somniferum HOM05D006291 ORTHO05D007669 3.0e-42 175.3 129 74.4
Cc06_g23850 Coffea canephora HOM05D006291 ORTHO05D007669 3.9e-42 174.9 129 76.0
MSTRG.10473 Avicennia marina HOM05D006291 ORTHO05D007669 8.8e-42 173.7 129 73.6
Ciclev10009894m.g Citrus clementina HOM05D006291 ORTHO05D007669 8.8e-42 173.7 128 75.0
Gohir.A05G286200 Gossypium hirsutum HOM05D006291 ORTHO05D007669 8.8e-42 173.7 122 77.0
PGSC0003DMG400013569 Solanum tuberosum HOM05D006291 ORTHO05D007669 8.8e-42 173.7 128 75.0
CSS0029803 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 1.5e-41 172.9 135 73.3
Eucgr.G00957 Eucalyptus grandis HOM05D006291 ORTHO05D007669 1.5e-41 172.9 128 73.4
Sabra06G0060300 Salix brachista HOM05D006291 ORTHO05D007669 1.5e-41 172.9 128 74.2
TWI63G0490 Tripterygium wilfordii HOM05D006291 ORTHO05D007669 1.5e-41 172.9 128 75.0
arahy.Tifrunner.gnm1.ann1.8H1PJC Arachis hypogaea HOM05D006291 ORTHO05D007669 2.0e-41 172.6 129 74.4
AUR62020734 Chenopodium quinoa HOM05D006291 ORTHO05D007669 2.0e-41 172.6 128 74.2
AUR62027977 Chenopodium quinoa HOM05D006291 ORTHO05D007669 2.0e-41 172.6 128 74.2
arahy.Tifrunner.gnm1.ann1.SCY2K5 Arachis hypogaea HOM05D006291 ORTHO05D007669 2.5e-41 172.2 127 74.0
Nitab4.5_0003139g0110 Nicotiana tabacum HOM05D006291 ORTHO05D007669 2.5e-41 172.2 128 74.2
CAN.G54.10 Capsicum annuum HOM05D006291 ORTHO05D007669 4.3e-41 171.4 128 73.4
Peaxi162Scf00474g00519 Petunia axillaris HOM05D006291 ORTHO05D007669 4.3e-41 171.4 128 74.2
Solyc07g042620.4 Solanum lycopersicum HOM05D006291 ORTHO05D007669 9.7e-41 170.2 126 74.6
Sopen07g022310 Solanum pennellii HOM05D006291 ORTHO05D007669 9.7e-41 170.2 126 74.6
Ah.10g032820 Amaranthus hybridus HOM05D006291 ORTHO05D007669 1.3e-40 169.9 128 73.4
HanXRQChr12g0358571 Helianthus annuus HOM05D006291 ORTHO05D007669 1.3e-40 169.9 128 72.7
Hund19355 Selenicereus undatus HOM05D006291 ORTHO05D007669 1.7e-40 169.5 115 77.4
ECA234G1508 Erigeron canadensis HOM05D006291 ORTHO05D007669 2.2e-40 169.1 128 71.9
HPP92_021942 Vanilla planifolia HOM05D006291 ORTHO05D007669 2.2e-40 169.1 128 71.1
HanXRQChr10g0309491 Helianthus annuus HOM05D006291 ORTHO05D007669 4.8e-40 167.9 127 73.2
Sc23g0004310 Simmondsia chinensis HOM05D006291 ORTHO05D007669 6.3e-40 167.5 129 72.1
Lalb_Chr01g0007741 Lupinus albus HOM05D006291 ORTHO05D007669 1.4e-39 166.4 129 70.5
HPP92_021968 Vanilla planifolia HOM05D006291 ORTHO05D007669 1.8e-39 166.0 127 70.1
Phvul.011G206700 Phaseolus vulgaris HOM05D006291 ORTHO05D007669 2.4e-39 165.6 128 70.3
Zm00001eb240760 Zea mays HOM05D006291 ORTHO05D007669 2.4e-39 165.6 128 68.0
Potri.018G149200 Populus trichocarpa HOM05D006291 ORTHO05D007669 3.1e-39 165.2 128 70.3
unitig_8.g3543 Utricularia gibba HOM05D006291 ORTHO05D007669 5.3e-39 164.5 126 70.6
VMungo1127G1563 Vigna mungo HOM05D006291 ORTHO05D007669 9.1e-39 163.7 128 69.5
Glyma.15G235500 Glycine max HOM05D006291 ORTHO05D007669 1.5e-38 162.9 128 68.8
Glyma.13G197100 Glycine max HOM05D006291 ORTHO05D007669 2.0e-38 162.5 128 68.8
CDE02G3570 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 2.6e-38 162.2 125 71.2
Oeu028819.1 Olea europaea HOM05D006291 ORTHO05D007669 4.5e-38 161.4 113 78.8
CDE06G0918 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 7.7e-38 160.6 127 68.5
CsaV3_2G009230 Cucumis sativus L. HOM05D006291 ORTHO05D007669 7.7e-38 160.6 119 74.8
Lj3g0009914 Lotus japonicus HOM05D006291 ORTHO05D007669 7.7e-38 160.6 128 68.0
Lsat_1_v5_gn_5_80980 Lactuca sativa HOM05D006291 ORTHO05D007669 1.3e-37 159.8 124 72.6
TPR.G27823 Trifolium pratense HOM05D006291 ORTHO05D007669 1.3e-37 159.8 129 69.0
Ca_23954_v3 Cicer arietinum L. HOM05D006291 ORTHO05D007669 2.9e-37 158.7 129 68.2
Sed0008839 Sechium edule HOM05D006291 ORTHO05D007669 6.5e-37 157.5 116 75.9
CANSAT56G1353 Cannabis sativa HOM05D006291 ORTHO05D007669 3.2e-36 155.2 128 66.4
CANSAT56G3141 Cannabis sativa HOM05D006291 ORTHO05D007669 3.2e-36 155.2 128 66.4
ATR0580G035 Amborella trichopoda HOM05D006291 ORTHO05D007669 4.2e-36 154.8 126 65.9
Psat0s418g0040 Pisum sativum HOM05D006291 ORTHO05D007669 4.2e-36 154.8 129 66.7
Dinv26485 Davidia involucrata HOM05D006291 ORTHO05D007669 7.2e-36 154.1 124 71.8
MELO3C003910.2 Cucumis melo HOM05D006291 ORTHO05D007669 9.4e-36 153.7 119 72.3
CDE06G1428 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 1.6e-35 152.9 127 67.7
AL3G44130 Arabidopsis lyrata HOM05D006291 ORTHO05D007669 3.6e-35 151.8 99 84.8
BraA03t10896Z Brassica rapa HOM05D006291 ORTHO05D007669 1.8e-34 149.4 87 89.7
Ca_23960_v3 Cicer arietinum L. HOM05D006291 ORTHO05D007669 2.3e-34 149.1 121 68.6
TWI32G0019 Tripterygium wilfordii HOM05D006291 ORTHO05D007669 2.6e-33 145.6 116 71.6
BolC9t56988H Brassica oleracea HOM05D006291 ORTHO05D007669 5.7e-33 144.4 87 87.4
DCAR_020455 Daucus carota HOM05D006291 ORTHO05D007669 1.1e-31 140.2 104 76.0
MBI16_g09344_MAGBIO Magnolia biondii HOM05D006291 ORTHO05D007669 1.8e-31 139.4 186 51.1
BcaC04g20645 Brassica carinata HOM05D006291 ORTHO05D007669 4.1e-31 138.3 92 82.6
Atru.BG.15.p Acer truncatum HOM05D006291 ORTHO05D007669 7.0e-31 137.5 96 78.1
C09p41100 Brassica napus HOM05D006291 ORTHO05D007669 1.2e-30 136.7 93 80.6
Pp3c19_4350 Physcomitrium patens HOM05D006291 ORTHO05D007669 2.6e-30 135.6 128 58.6
Mapoly0027s0144 Marchantia polymorpha HOM05D006291 ORTHO05D007669 1.3e-29 133.3 128 57.0
Actinidia02472 Actinidia chinensis HOM05D006291 ORTHO05D007669 5.0e-29 131.3 104 71.2
Medtr8g039140 Medicago truncatula HOM05D006291 ORTHO05D007669 7.2e-28 127.5 104 68.3
Nitab4.5_0000170g0080 Nicotiana tabacum HOM05D006291 ORTHO05D007669 2.3e-26 122.5 96 71.9
Dinv12620 Davidia involucrata HOM05D006291 ORTHO05D007669 5.7e-25 117.9 92 72.8
SMO200G0161 Selaginella moellendorffii HOM05D006291 ORTHO05D007669 1.3e-24 116.7 119 52.9
CARHR104040 Cardamine hirsuta HOM05D006291 ORTHO05D007669 1.8e-23 112.8 61 93.4
BolC3t14280H Brassica oleracea HOM05D006291 ORTHO05D007669 3.5e-22 108.6 61 88.5
AagrBONN_evm.TU.Sc2ySwM_362.1895 Anthoceros agrestis HOM05D006291 ORTHO05D007669 1.6e-19 99.8 99 52.5
SalBow3G3584 Salvia bowleyana HOM05D006291 ORTHO05D007669 8.0e-19 97.4 104 55.8
BolC3t14281H Brassica oleracea HOM05D006291 ORTHO05D007669 3.0e-18 95.5 66 80.3
Nitab4.5_0002603g0030 Nicotiana tabacum HOM05D006291 ORTHO05D007669 8.8e-18 94.0 72 70.8
BcaB08g35517 Brassica carinata HOM05D006291 ORTHO05D007669 2.0e-17 92.8 65 76.9
ClCG11G011210 Citrullus lanatus HOM05D006291 ORTHO05D007669 2.0e-17 92.8 61 75.4
Os02g0462900 Oryza sativa ssp. japonica HOM05D006291 ORTHO05D007669 4.4e-17 91.7 61 72.1
Actinidia07563 Actinidia chinensis HOM05D006291 ORTHO05D007669 6.3e-16 87.8 66 75.8
SEGI_05817 Sequoiadendron giganteum HOM05D006291 ORTHO05D007669 1.3e-13 80.1 64 64.1
Cpa.g.sc91.61 Carica papaya HOM05D006291 ORTHO05D007669 4.2e-12 75.1 53 77.4
PRCOL_00006384 Prasinoderma coloniale HOM05D006291 ORTHO05D007669 2.0e-09 66.2 117 35.0
CBR_g16047 Chara braunii HOM05D006291 ORTHO05D007669 4.1e-07 58.5 65 44.6
vmacro20755 Vaccinium macrocarpon HOM05D006291 ORTHO05D007669 5.4e-07 58.2 54 64.8
Haze_19088 Corylus avellana HOM05D000287 ORTHO05D000319 5.9e-06 54.7 41 65.9


User provided reference genes

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