Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10014934m.g Eutrema salsugineum HOM05D007510 ORTHO05D009587 1.8e-81 305.8 150 100.0
Sp6g26950 Schrenkiella parvula HOM05D007510 ORTHO05D009587 5.4e-54 214.5 149 74.5
A02p04090 Brassica napus HOM05D007510 ORTHO05D009587 7.1e-46 187.6 152 69.7
BcaC04g18811 Brassica carinata HOM05D007510 ORTHO05D009587 3.9e-44 181.8 140 69.3
C09p59910 Brassica napus HOM05D007510 ORTHO05D009587 5.6e-43 177.9 140 68.6
BolC9t58827H Brassica oleracea HOM05D007510 ORTHO05D009587 5.6e-43 177.9 140 68.6
BraA02t05372Z Brassica rapa HOM05D007510 ORTHO05D009587 1.3e-42 176.8 152 65.1
A10p22120 Brassica napus HOM05D007510 ORTHO05D009587 1.2e-40 170.2 142 65.5
BraA10t44271Z Brassica rapa HOM05D007510 ORTHO05D009587 1.2e-40 170.2 142 65.5
BcaC03g18546 Brassica carinata HOM05D007510 ORTHO05D009587 9.9e-40 167.2 152 63.8
BcaB08g36792 Brassica carinata HOM05D007510 ORTHO05D009587 1.7e-39 166.4 141 68.8
AT5G17280 Arabidopsis thaliana HOM05D007510 ORTHO05D009587 6.4e-39 164.5 140 65.7
BcaNung00409 Brassica carinata HOM05D007510 ORTHO05D009587 6.4e-39 164.5 152 64.5
Carub.0006s1547 Capsella rubella HOM05D007510 ORTHO05D009587 1.4e-38 163.3 144 64.6
Aa31LG1G14840 Aethionema arabicum HOM05D007510 ORTHO05D009587 5.4e-38 161.4 154 61.0
C02p08940 Brassica napus HOM05D007510 ORTHO05D009587 2.5e-35 152.5 154 61.0
BolC2t06803H Brassica oleracea HOM05D007510 ORTHO05D009587 2.5e-35 152.5 154 61.0
AL6G28360 Arabidopsis lyrata HOM05D007510 ORTHO05D009587 1.8e-33 146.4 138 61.6
Aa31LG11G5850 Aethionema arabicum HOM05D007510 ORTHO05D009587 1.4e-30 136.7 152 53.9
CARHR195940 Cardamine hirsuta HOM05D007510 ORTHO05D009587 2.1e-21 106.3 119 57.1
Nitab4.5_0002266g0030 Nicotiana tabacum HOM05D007510 ORTHO05D009587 3.1e-17 92.4 138 39.1
vmacro22104 Vaccinium macrocarpon HOM05D007510 ORTHO05D009587 6.9e-17 91.3 77 59.7
Nitab4.5_0012525g0020 Nicotiana tabacum HOM05D007510 ORTHO05D009587 2.6e-16 89.4 144 37.5
Ciclev10026716m.g Citrus clementina HOM05D007510 ORTHO05D009587 1.7e-15 86.7 70 58.6
ClCG01G020060 Citrullus lanatus HOM05D007510 ORTHO05D000703 2.9e-15 85.9 71 57.7
Oeu037724.1 Olea europaea HOM05D007510 ORTHO05D009587 3.8e-15 85.5 75 56.0
Oeu037725.1 Olea europaea HOM05D007510 ORTHO05D009587 3.8e-15 85.5 75 56.0
CiPaw.04G025800 Carya illinoinensis HOM05D007510 ORTHO05D009587 5.0e-15 85.1 64 62.5
Solyc02g084650.3 Solanum lycopersicum HOM05D007510 ORTHO05D009587 6.5e-15 84.7 128 39.8
Lsat_1_v5_gn_4_151140 Lactuca sativa HOM05D007510 ORTHO05D009587 1.4e-14 83.6 56 67.9
CAN.G358.14 Capsicum annuum HOM05D007510 ORTHO05D009587 1.9e-14 83.2 85 51.8
Cpa.g.sc6.200 Carica papaya HOM05D007510 ORTHO05D009587 1.9e-14 83.2 154 39.6
Sc16g0002400 Simmondsia chinensis HOM05D007510 ORTHO05D009587 1.9e-14 83.2 111 44.1
Sopen02g029320 Solanum pennellii HOM05D007510 ORTHO05D009587 1.9e-14 83.2 128 39.1
Lj4g0024164 Lotus japonicus HOM05D007510 ORTHO05D009587 2.5e-14 82.8 51 64.7
Medtr8g076660 Medicago truncatula HOM05D007510 ORTHO05D009587 2.5e-14 82.8 40 77.5
VMungo0251G3154 Vigna mungo HOM05D007510 ORTHO05D009587 2.5e-14 82.8 36 86.1
CiPaw.08G136300 Carya illinoinensis HOM05D007510 ORTHO05D009587 3.2e-14 82.4 60 65.0
PGSC0003DMG400003618 Solanum tuberosum HOM05D007510 ORTHO05D009587 3.2e-14 82.4 48 68.8
Glyma.02G052200 Glycine max HOM05D007510 ORTHO05D009587 4.2e-14 82.0 60 60.0
SalBow5G2055 Salvia bowleyana HOM05D007510 ORTHO05D009587 4.2e-14 82.0 113 38.9
Rhsim08G0036700 Rhododendron simsii HOM05D007510 ORTHO05D009587 5.5e-14 81.6 46 71.7
unitig_27.g25318 Utricularia gibba HOM05D007510 ORTHO05D009587 5.5e-14 81.6 37 86.5
HanXRQChr11g0325681 Helianthus annuus HOM05D007510 ORTHO05D009587 7.2e-14 81.3 52 63.5
TPR.G21530 Trifolium pratense HOM05D007510 ORTHO05D009587 7.2e-14 81.3 114 45.6
Ah.02g124790 Amaranthus hybridus HOM05D007510 ORTHO05D009587 9.3e-14 80.9 68 57.4
Lalb_Chr05g0229951 Lupinus albus HOM05D007510 ORTHO05D009587 9.3e-14 80.9 46 67.4
Actinidia26112 Actinidia chinensis HOM05D007510 ORTHO05D009587 1.2e-13 80.5 45 73.3
CSS0038414 Camellia sinensis var. sinensis HOM05D007510 ORTHO05D009587 1.2e-13 80.5 106 39.6
COL.COLO4_21980 Corchorus olitorius HOM05D001094 ORTHO05D001050 1.2e-13 80.5 70 61.4
CsaV3_6G046830 Cucumis sativus L. HOM05D007510 ORTHO05D009587 2.1e-13 79.7 72 52.8
Prupe.7G163800 Prunus persica HOM05D007510 ORTHO05D000703 2.7e-13 79.3 74 51.4
arahy.Tifrunner.gnm1.ann1.X6BQPF Arachis hypogaea HOM05D007510 ORTHO05D009587 3.6e-13 79.0 36 83.3
MELO3C007880.2 Cucumis melo HOM05D007510 ORTHO05D009587 3.6e-13 79.0 86 47.7
Migut.H02491 Erythranthe guttata HOM05D007510 ORTHO05D009587 3.6e-13 79.0 110 40.9
SHI08591 Sapria himalayana HOM05D007510 ORTHO05D009587 6.1e-13 78.2 81 49.4
PGR102G2493 Punica granatum HOM05D007510 ORTHO05D009587 7.9e-13 77.8 144 41.0
ECA232G0818 Erigeron canadensis HOM05D001094 ORTHO05D001050 1.0e-12 77.4 67 58.2
Potri.007G017200 Populus trichocarpa HOM05D007510 ORTHO05D009587 1.8e-12 76.6 98 45.9
HanXRQChr15g0494821 Helianthus annuus HOM05D007510 ORTHO05D009587 2.3e-12 76.3 113 42.5
Nn6g32199 Nelumbo nucifera HOM05D007510 ORTHO05D009587 2.3e-12 76.3 59 57.6
HPP92_022284 Vanilla planifolia HOM05D007510 ORTHO05D009587 3.0e-12 75.9 46 67.4
HPP92_022401 Vanilla planifolia HOM05D007510 ORTHO05D009587 3.0e-12 75.9 46 67.4
Psat4g096640 Pisum sativum HOM05D007510 ORTHO05D009587 3.9e-12 75.5 36 75.0
HPP92_028382 Vanilla planifolia HOM05D007510 ORTHO05D009587 3.9e-12 75.5 46 67.4
AUR62007639 Chenopodium quinoa HOM05D007510 ORTHO05D009587 5.1e-12 75.1 81 45.7
Manes.02G175500 Manihot esculenta HOM05D007510 ORTHO05D009587 5.1e-12 75.1 36 83.3
Gohir.A02G168700 Gossypium hirsutum HOM05D007510 ORTHO05D009587 1.1e-11 73.9 114 43.9
Gohir.D03G011300 Gossypium hirsutum HOM05D007510 ORTHO05D009587 1.1e-11 73.9 114 43.9
Gorai.003G011700 Gossypium raimondii HOM05D007510 ORTHO05D009587 1.1e-11 73.9 114 43.9
Duzib264G0517 Durio zibethinus HOM05D007510 ORTHO05D009587 4.3e-11 72.0 36 80.6
MD02G1136700 Malus domestica HOM05D007510 ORTHO05D000703 7.4e-11 71.2 34 79.4
Thecc.01G024800 Theobroma cacao HOM05D007510 ORTHO05D009587 7.4e-11 71.2 80 47.5
TAR625G1319 Trochodendron aralioides HOM05D007510 ORTHO05D009587 7.4e-11 71.2 63 55.6
CANSAT78G1864 Cannabis sativa HOM05D007510 ORTHO05D009587 1.3e-10 70.5 32 81.2
Ca_22347_v3 Cicer arietinum L. HOM05D007510 ORTHO05D009587 1.3e-10 70.5 31 83.9
Haze_03821 Corylus avellana HOM05D007510 ORTHO05D009587 1.3e-10 70.5 146 35.6
Nn5g29177 Nelumbo nucifera HOM05D007510 ORTHO05D009587 1.3e-10 70.5 62 50.0
Phvul.003G257700 Phaseolus vulgaris HOM05D007510 ORTHO05D009587 1.3e-10 70.5 31 83.9
Cfa006928 Carpinus fangiana HOM05D007510 ORTHO05D009587 1.7e-10 70.1 36 77.8
FAN28G2971 Fragaria x ananassa HOM05D007510 ORTHO05D009587 1.7e-10 70.1 61 57.4
Os09g0530900 Oryza sativa ssp. japonica HOM05D007510 ORTHO05D009587 2.2e-10 69.7 43 62.8
SGA_v2.0_scaffold280G46849 Striga asiatica HOM05D007510 ORTHO05D009587 2.2e-10 69.7 31 87.1
Atru.chr3.749 Acer truncatum HOM05D007510 ORTHO05D009587 4.8e-10 68.6 42 64.3
Aqoxy1G00866 Aquilegia oxysepala HOM05D007510 ORTHO05D009587 4.8e-10 68.6 29 89.7
Hma1.2p1_0266F.1_g107010 Hydrangea macrophylla HOM05D007510 ORTHO05D009587 4.8e-10 68.6 77 44.2
Mapoly0025s0056 Marchantia polymorpha HOM05D007510 ORTHO05D009587 4.8e-10 68.6 74 43.2
Sed0019199 Sechium edule HOM05D007510 ORTHO05D009587 8.2e-10 67.8 37 70.3
CANSAT01G2887 Cannabis sativa HOM05D007510 ORTHO05D009587 1.1e-09 67.4 146 31.5
TWI09G1276 Tripterygium wilfordii HOM05D007510 ORTHO05D009587 1.4e-09 67.0 71 45.1
AagrBONN_evm.TU.Sc2ySwM_228.2268 Anthoceros agrestis HOM05D007510 ORTHO05D009587 2.4e-09 66.2 47 59.6
Sc03g0003350 Simmondsia chinensis HOM05D007510 ORTHO05D009587 2.4e-09 66.2 33 75.8
QL06p034549 Quercus lobata HOM05D007510 ORTHO05D009587 5.3e-09 65.1 100 37.0
AagrBONN_evm.TU.Sc2ySwM_368.2258 Anthoceros agrestis HOM05D007510 ORTHO05D009587 1.2e-08 63.9 62 50.0
SEGI_27269 Sequoiadendron giganteum HOM05D007510 ORTHO05D009587 1.2e-08 63.9 86 37.2
EL10As8g23866 Beta vulgaris HOM05D007510 ORTHO05D009587 1.5e-08 63.5 31 74.2
CDE12G0095 Ceratophyllum demersum HOM05D007510 ORTHO05D009587 1.5e-08 63.5 29 82.8
FAN26G1275 Fragaria x ananassa HOM05D007510 ORTHO05D009587 1.5e-08 63.5 66 51.5
ATR0661G079 Amborella trichopoda HOM05D007510 ORTHO05D009587 2.6e-08 62.8 29 75.9
FvH4_1g12420 Fragaria vesca HOM05D000116 ORTHO05D000703 3.4e-08 62.4 61 52.5
CDE04G3692 Ceratophyllum demersum HOM05D001179 ORTHO05D002194 5.9e-08 61.6 81 43.2
Dinv40044 Davidia involucrata HOM05D007510 ORTHO05D009587 2.2e-07 59.7 56 55.4
Zm00001eb319510 Zea mays HOM05D007510 ORTHO05D009587 3.8e-07 58.9 28 71.4
AL6G28340 Arabidopsis lyrata HOM05D007510 ORTHO05D009587 5.5e-06 55.1 61 49.2
Pp3c10_3490 Physcomitrium patens HOM05D007510 ORTHO05D009587 9.4e-06 54.3 75 37.3


User provided reference genes

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