Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10014916m.g Eutrema salsugineum HOM05D009123 ORTHO05D011699 1.2e-80 303.1 154 100.0
BraA02t04707Z Brassica rapa HOM05D009123 ORTHO05D011699 8.9e-60 233.8 154 74.7
BolC2t06034H Brassica oleracea HOM05D009123 ORTHO05D011699 3.4e-59 231.9 154 76.0
BcaB05g21892 Brassica carinata HOM05D009123 ORTHO05D011699 2.2e-58 229.2 161 72.7
BcaC03g13061 Brassica carinata HOM05D009123 ORTHO05D011699 4.9e-58 228.0 154 74.7
C02p00340 Brassica napus HOM05D009123 ORTHO05D011699 4.9e-58 228.0 154 74.7
A08p14150 Brassica napus HOM05D009123 ORTHO05D011699 3.0e-39 165.6 177 53.1
BcaB02g10130 Brassica carinata HOM05D009123 ORTHO05D011699 3.9e-39 165.2 162 54.3
BcaB04g18529 Brassica carinata HOM05D009123 ORTHO05D011699 2.5e-38 162.5 177 53.1
C03p81730 Brassica napus HOM05D009123 ORTHO05D011699 2.8e-37 159.1 177 52.5
BolC3t20444H Brassica oleracea HOM05D009123 ORTHO05D011699 2.8e-37 159.1 177 52.5
BcaC01g00598 Brassica carinata HOM05D009123 ORTHO05D011699 1.1e-36 157.1 177 51.4
Sp6g40410 Schrenkiella parvula HOM05D009123 ORTHO05D011699 2.0e-35 152.9 161 53.4
A07p18490 Brassica napus HOM05D009123 ORTHO05D011699 1.3e-34 150.2 163 52.1
BraA07t29565Z Brassica rapa HOM05D009123 ORTHO05D011699 1.3e-34 150.2 163 52.1
BraA08t33409Z Brassica rapa HOM05D009123 ORTHO05D011699 1.1e-33 147.1 155 51.0
BcaC02g10927 Brassica carinata HOM05D009123 ORTHO05D011699 7.1e-33 144.4 163 50.3
C04p23580 Brassica napus HOM05D009123 ORTHO05D011699 7.1e-33 144.4 163 50.3
A03p67140 Brassica napus HOM05D009123 ORTHO05D011699 7.3e-30 134.4 155 46.5
CARHR119510 Cardamine hirsuta HOM05D009123 ORTHO05D011699 2.2e-26 122.9 166 48.8
BolC4t24290H Brassica oleracea HOM05D009123 ORTHO05D011699 2.4e-25 119.4 145 44.8
AT5G23820 Arabidopsis thaliana HOM05D009123 ORTHO05D011699 1.6e-24 116.7 165 46.7
Carub.0004s0766 Capsella rubella HOM05D009123 ORTHO05D011699 2.7e-24 115.9 170 46.5
AL6G35100 Arabidopsis lyrata HOM05D009123 ORTHO05D011699 3.5e-24 115.5 164 43.9
AT5G23840 Arabidopsis thaliana HOM05D009123 ORTHO05D011699 7.3e-22 107.8 156 42.3
BraA01t02761Z Brassica rapa HOM05D009123 ORTHO05D011699 1.8e-20 103.2 98 51.0
AT2G26370 Arabidopsis thaliana HOM05D009123 ORTHO05D038737 1.9e-17 93.2 179 39.1
AT5G23830 Arabidopsis thaliana HOM05D009123 ORTHO05D011699 9.3e-17 90.9 166 41.0
Carub.0003s2749 Capsella rubella HOM05D009123 ORTHO05D038737 1.6e-16 90.1 182 40.1
C04p27520 Brassica napus HOM05D009123 ORTHO05D011699 3.5e-16 89.0 88 48.9
C03p20560 Brassica napus HOM05D025788 ORTHO05D019748 1.1e-14 84.0 151 37.1
BcaC02g07810 Brassica carinata HOM05D030909 ORTHO05D027123 2.5e-14 82.8 156 39.1
AT1G45015 Arabidopsis thaliana HOM05D009123 ORTHO05D019748 2.1e-13 79.7 161 35.4
AL6G35080 Arabidopsis lyrata HOM05D009123 ORTHO05D011699 1.1e-12 77.4 75 53.3
Thhalv10029005m.g Eutrema salsugineum HOM05D009123 ORTHO05D195657 5.8e-11 71.6 168 35.7
BcaB06g28710 Brassica carinata HOM05D030909 ORTHO05D027123 9.9e-11 70.9 117 42.7
BolC3t14436H Brassica oleracea HOM05D025788 ORTHO05D019748 4.9e-10 68.6 58 56.9
BolC3t14467H Brassica oleracea HOM05D025788 ORTHO05D019748 4.9e-10 68.6 58 56.9
A06p22210 Brassica napus HOM05D002139 ORTHO05D002264 6.4e-10 68.2 160 34.4
Sp5g17230 Schrenkiella parvula HOM05D002139 ORTHO05D002264 1.1e-09 67.4 159 33.3
BraA06t25309Z Brassica rapa HOM05D002139 ORTHO05D002264 1.4e-09 67.0 160 32.5
AL5G22100 Arabidopsis lyrata HOM05D002139 ORTHO05D002264 4.2e-09 65.5 160 31.2
Sp2g30780 Schrenkiella parvula HOM05D009123 ORTHO05D019748 5.5e-09 65.1 163 35.0
Thhalv10003282m.g Eutrema salsugineum HOM05D009123 ORTHO05D019748 7.1e-09 64.7 155 30.3
AT3G44100 Arabidopsis thaliana HOM05D002139 ORTHO05D002264 1.2e-08 63.9 160 31.9
BcaC01g02081 Brassica carinata HOM05D002139 ORTHO05D002264 1.2e-08 63.9 160 33.1
C03p68780 Brassica napus HOM05D002139 ORTHO05D002264 1.2e-08 63.9 160 33.1
BolC3t19132H Brassica oleracea HOM05D002139 ORTHO05D002264 1.2e-08 63.9 160 33.1
Carub.0005s0985 Capsella rubella HOM05D002139 ORTHO05D002264 1.2e-08 63.9 135 35.6
BcaB01g01201 Brassica carinata HOM05D002139 ORTHO05D002264 3.5e-08 62.4 133 34.6
BolC3t17947H Brassica oleracea HOM05D053407 ORTHO05D040603 1.3e-07 60.5 96 37.5
Thhalv10010794m.g Eutrema salsugineum HOM05D002139 ORTHO05D002264 3.9e-07 58.9 163 30.7
CARHR152880 Cardamine hirsuta HOM05D002139 ORTHO05D002264 4.3e-06 55.5 135 32.6
THA.LOC104810941 Tarenaya hassleriana HOM05D002139 ORTHO05D002264 4.3e-06 55.5 133 28.6
BolC3t21545H Brassica oleracea HOM05D008709 ORTHO05D011440 9.6e-06 54.3 160 31.9


User provided reference genes

Program Settings