Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10014904m.g Eutrema salsugineum HOM05D007161 ORTHO05D009103 5.9e-51 204.5 158 100.0
Sp6g34900 Schrenkiella parvula HOM05D007161 ORTHO05D009103 4.4e-46 188.3 158 93.0
A03p03560 Brassica napus HOM05D007161 ORTHO05D009103 3.1e-44 182.2 158 90.5
BraA03t09706Z Brassica rapa HOM05D007161 ORTHO05D009103 3.1e-44 182.2 158 90.5
C03p04010 Brassica napus HOM05D007161 ORTHO05D009103 9.1e-44 180.6 158 89.9
BcaB01g05640 Brassica carinata HOM05D007161 ORTHO05D009103 2.7e-43 179.1 158 89.2
BcaB01g05681 Brassica carinata HOM05D007161 ORTHO05D009103 7.7e-43 177.6 159 89.3
BolC3t12938H Brassica oleracea HOM05D007161 ORTHO05D009103 6.5e-42 174.5 159 88.7
Carub.0006s0694 Capsella rubella HOM05D007161 ORTHO05D009103 2.7e-40 169.1 158 88.0
AT5G08050 Arabidopsis thaliana HOM05D007161 ORTHO05D009103 1.0e-39 167.2 159 87.4
CARHR205130 Cardamine hirsuta HOM05D007161 ORTHO05D009103 3.0e-39 165.6 158 87.3
AL6G18400 Arabidopsis lyrata HOM05D007161 ORTHO05D009103 6.8e-39 164.5 159 87.4
Aa31LG3G18490 Aethionema arabicum HOM05D007161 ORTHO05D009103 4.9e-37 158.3 156 87.2
THA.LOC104801155 Tarenaya hassleriana HOM05D007161 ORTHO05D009103 1.6e-32 143.3 174 72.4
TWI81G0640 Tripterygium wilfordii HOM05D007161 ORTHO05D009103 2.8e-24 115.9 166 69.3
Ciclev10022373m.g Citrus clementina HOM05D007161 ORTHO05D009103 1.8e-23 113.2 167 65.3
Dinv22772 Davidia involucrata HOM05D007161 ORTHO05D009103 5.2e-23 111.7 165 63.6
Peaxi162Scf00201g00331 Petunia axillaris HOM05D007161 ORTHO05D009103 1.5e-22 110.2 146 69.9
RcHm_v2.0_Chr7g0183201 Rosa chinensis HOM05D007161 ORTHO05D009103 3.4e-22 109.0 145 71.7
Prupe.5G206100 Prunus persica HOM05D007161 ORTHO05D009103 4.4e-22 108.6 151 69.5
Sopen03g034090 Solanum pennellii HOM05D007161 ORTHO05D009103 4.4e-22 108.6 161 64.0
Hund02576 Selenicereus undatus HOM05D007161 ORTHO05D009103 9.8e-22 107.5 164 64.0
Nn4g23440 Nelumbo nucifera HOM05D007161 ORTHO05D009103 1.3e-21 107.1 165 64.8
Nitab4.5_0001485g0090 Nicotiana tabacum HOM05D007161 ORTHO05D009103 1.3e-21 107.1 162 64.2
Lsat_1_v5_gn_5_22381 Lactuca sativa HOM05D007161 ORTHO05D009103 1.7e-21 106.7 152 67.1
Rhsim08G0144900 Rhododendron simsii HOM05D007161 ORTHO05D009103 1.7e-21 106.7 164 65.9
Sabra15G0084100 Salix brachista HOM05D007161 ORTHO05D009103 1.7e-21 106.7 154 66.2
AUR62008547 Chenopodium quinoa HOM05D007161 ORTHO05D009103 2.9e-21 105.9 151 69.5
Oeu017188.1 Olea europaea HOM05D007161 ORTHO05D009103 2.9e-21 105.9 122 76.2
FAN13G1189 Fragaria x ananassa HOM05D007161 ORTHO05D009103 1.1e-20 104.0 139 74.1
Glyma.04G161600 Glycine max HOM05D007161 ORTHO05D009103 1.1e-20 104.0 166 63.3
Manes.06G083700 Manihot esculenta HOM05D007161 ORTHO05D009103 1.1e-20 104.0 160 63.1
TWI60G0438 Tripterygium wilfordii HOM05D007161 ORTHO05D009103 1.4e-20 103.6 165 66.1
ATR0177G008 Amborella trichopoda HOM05D007161 ORTHO05D009103 1.9e-20 103.2 167 61.1
arahy.Tifrunner.gnm1.ann1.KM320G Arachis hypogaea HOM05D007161 ORTHO05D009103 1.9e-20 103.2 168 62.5
MSTRG.4482 Avicennia marina HOM05D007161 ORTHO05D009103 1.9e-20 103.2 173 60.7
PGSC0003DMG400024633 Solanum tuberosum HOM05D007161 ORTHO05D009103 1.9e-20 103.2 161 62.1
CANSAT56G0131 Cannabis sativa HOM05D007161 ORTHO05D009103 2.4e-20 102.8 166 65.7
Cc00_g12110 Coffea canephora HOM05D007161 ORTHO05D009103 2.4e-20 102.8 160 63.8
FAN08G2338 Fragaria x ananassa HOM05D007161 ORTHO05D009103 2.4e-20 102.8 143 71.3
TAR629G0203 Trochodendron aralioides HOM05D007161 ORTHO05D009103 2.4e-20 102.8 170 61.2
CAN.G1228.16 Capsicum annuum HOM05D007161 ORTHO05D009103 3.2e-20 102.4 163 60.7
Ca_14363_v3 Cicer arietinum L. HOM05D007161 ORTHO05D009103 3.2e-20 102.4 166 65.7
Aqoxy3G03679 Aquilegia oxysepala HOM05D007161 ORTHO05D009103 4.1e-20 102.1 149 69.1
FvH4_5g13740 Fragaria vesca HOM05D007161 ORTHO05D009103 4.1e-20 102.1 67 79.1
FAN18G1870 Fragaria x ananassa HOM05D007161 ORTHO05D009103 4.1e-20 102.1 67 79.1
ECA246G0920 Erigeron canadensis HOM05D007161 ORTHO05D009103 5.4e-20 101.7 161 64.6
HanXRQChr08g0230491 Helianthus annuus HOM05D007161 ORTHO05D009103 5.4e-20 101.7 68 77.9
Ah.02g114100 Amaranthus hybridus HOM05D007161 ORTHO05D009103 7.0e-20 101.3 161 65.2
arahy.Tifrunner.gnm1.ann1.N0KAAL Arachis hypogaea HOM05D007161 ORTHO05D009103 7.0e-20 101.3 168 62.5
DCAR_011565 Daucus carota HOM05D007161 ORTHO05D009103 7.0e-20 101.3 150 67.3
Eucgr.B00604 Eucalyptus grandis HOM05D007161 ORTHO05D009103 7.0e-20 101.3 165 61.8
TPR.G12153 Trifolium pratense HOM05D007161 ORTHO05D009103 9.2e-20 100.9 163 66.9
Phvul.009G202100 Phaseolus vulgaris HOM05D007161 ORTHO05D009103 1.2e-19 100.5 163 63.2
vmacro17616 Vaccinium macrocarpon HOM05D007161 ORTHO05D009103 1.2e-19 100.5 190 56.3
AUR62021546 Chenopodium quinoa HOM05D007161 ORTHO05D009103 1.6e-19 100.1 67 74.6
PSO017G0728 Papaver somniferum HOM05D007161 ORTHO05D009103 1.6e-19 100.1 163 63.2
Atru.chr9.557 Acer truncatum HOM05D007161 ORTHO05D009103 2.0e-19 99.8 167 62.3
SGA_v2.0_scaffold42G16039 Striga asiatica HOM05D007161 ORTHO05D009103 2.0e-19 99.8 144 67.4
PGR083G0667 Punica granatum HOM05D007161 ORTHO05D009103 2.7e-19 99.4 162 62.3
Solyc03g115020.3 Solanum lycopersicum HOM05D007161 ORTHO05D009103 2.7e-19 99.4 158 61.4
PSO478G3435 Papaver somniferum HOM05D007161 ORTHO05D009103 4.6e-19 98.6 65 76.9
EL10Ac5g11145 Beta vulgaris HOM05D007161 ORTHO05D009103 6.0e-19 98.2 164 64.0
CSS0009196 Camellia sinensis var. sinensis HOM05D007161 ORTHO05D009103 7.8e-19 97.8 65 76.9
CSS0029825 Camellia sinensis var. sinensis HOM05D007161 ORTHO05D009103 7.8e-19 97.8 65 76.9
CiPaw.11G054500 Carya illinoinensis HOM05D007161 ORTHO05D009103 7.8e-19 97.8 163 61.3
MELO3C002036.2 Cucumis melo HOM05D007161 ORTHO05D009103 7.8e-19 97.8 167 60.5
CsaV3_1G006050 Cucumis sativus L. HOM05D007161 ORTHO05D009103 7.8e-19 97.8 167 60.5
MD06G1225900 Malus domestica HOM05D007161 ORTHO05D009103 7.8e-19 97.8 149 67.1
QL10p019814 Quercus lobata HOM05D007161 ORTHO05D009103 7.8e-19 97.8 166 61.4
Lj1g0027416 Lotus japonicus HOM05D007161 ORTHO05D009103 1.0e-18 97.4 151 68.2
GSVIVG01008106001 Vitis vinifera HOM05D007161 ORTHO05D009103 1.0e-18 97.4 158 62.7
Glyma.06G204200 Glycine max HOM05D007161 ORTHO05D009103 1.3e-18 97.1 169 61.5
Nitab4.5_0007356g0010 Nicotiana tabacum HOM05D007161 ORTHO05D009103 1.7e-18 96.7 125 72.8
Haze_07737 Corylus avellana HOM05D007161 ORTHO05D009103 2.3e-18 96.3 164 60.4
Potri.015G058600 Populus trichocarpa HOM05D007161 ORTHO05D009103 2.3e-18 96.3 160 61.2
ClCG04G011740 Citrullus lanatus HOM05D007161 ORTHO05D009103 3.0e-18 95.9 168 61.3
MSTRG.9598 Avicennia marina HOM05D007161 ORTHO05D009103 3.9e-18 95.5 165 62.4
Lj5C102G4 Lonicera japonica HOM05D007161 ORTHO05D009103 5.0e-18 95.1 155 67.7
Sc11g0004490 Simmondsia chinensis HOM05D007161 ORTHO05D009103 5.0e-18 95.1 165 62.4
CDE05G0262 Ceratophyllum demersum HOM05D007161 ORTHO05D009103 6.6e-18 94.7 161 62.7
MD14G1212800 Malus domestica HOM05D007161 ORTHO05D009103 6.6e-18 94.7 149 65.8
Sed0004238 Sechium edule HOM05D007161 ORTHO05D009103 6.6e-18 94.7 183 57.4
Cfa019345 Carpinus fangiana HOM05D007161 ORTHO05D009103 8.6e-18 94.4 164 60.4
Duzib084G1357 Durio zibethinus HOM05D007161 ORTHO05D009103 8.6e-18 94.4 65 78.5
HanXRQChr17g0550221 Helianthus annuus HOM05D007161 ORTHO05D009103 1.1e-17 94.0 67 71.6
Oeu044879.1 Olea europaea HOM05D007161 ORTHO05D009103 1.9e-17 93.2 87 75.9
SalBow7G4182 Salvia bowleyana HOM05D007161 ORTHO05D009103 1.9e-17 93.2 148 64.2
Psat5g207080 Pisum sativum HOM05D007161 ORTHO05D009103 5.6e-17 91.7 162 63.0
Gohir.A07G068000 Gossypium hirsutum HOM05D007161 ORTHO05D009103 1.2e-16 90.5 168 60.7
Thecc.03G103000 Theobroma cacao HOM05D007161 ORTHO05D009103 1.2e-16 90.5 168 60.1
Medtr3g026020 Medicago truncatula HOM05D007161 ORTHO05D009103 1.6e-16 90.1 162 64.8
Lalb_Chr12g0199331 Lupinus albus HOM05D007161 ORTHO05D009103 2.8e-16 89.4 144 66.0
COL.COLO4_24339 Corchorus olitorius HOM05D007161 ORTHO05D009103 3.6e-16 89.0 92 76.1
Migut.D01637 Erythranthe guttata HOM05D007161 ORTHO05D009103 6.2e-16 88.2 157 63.7
Gohir.D07G072600 Gossypium hirsutum HOM05D007161 ORTHO05D009103 1.1e-15 87.4 168 59.5
Gorai.001G076800 Gossypium raimondii HOM05D007161 ORTHO05D009103 1.1e-15 87.4 168 59.5
Mapoly0107s0029 Marchantia polymorpha HOM05D007161 ORTHO05D009103 6.8e-15 84.7 92 70.7
Pp3c1_19210 Physcomitrium patens HOM05D007161 ORTHO05D009103 6.8e-15 84.7 92 69.6
Os12g0575000 Oryza sativa ssp. japonica HOM05D007161 ORTHO05D009103 2.6e-14 82.8 65 66.2
SEGI_08112 Sequoiadendron giganteum HOM05D007161 ORTHO05D009103 2.6e-14 82.8 92 66.3
CDE02G4042 Ceratophyllum demersum HOM05D005465 ORTHO05D006612 5.8e-14 81.6 60 66.7
SMO139G0085 Selaginella moellendorffii HOM05D007161 ORTHO05D009103 9.8e-14 80.9 124 66.9
AagrBONN_evm.TU.Sc2ySwM_344.2890 Anthoceros agrestis HOM05D007161 ORTHO05D009103 1.1e-12 77.4 68 63.2
Zm00001eb029520 Zea mays HOM05D007161 ORTHO05D009103 2.4e-12 76.3 67 61.2
Peaxi162Scf00009g00010 Petunia axillaris HOM05D007161 ORTHO05D009103 5.4e-12 75.1 77 53.2
Os11g0460900 Oryza sativa ssp. japonica HOM05D007161 ORTHO05D009103 1.9e-09 66.6 137 36.5


User provided reference genes

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