Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10014860m.g Eutrema salsugineum HOM05D009029 ORTHO05D009596 1.5e-92 342.8 168 100.0
Sp6g26880 Schrenkiella parvula HOM05D009029 ORTHO05D009596 5.5e-71 271.2 162 76.5
BcaB05g23261 Brassica carinata HOM05D009029 ORTHO05D009596 6.7e-69 264.2 172 75.0
BcaB08g36781 Brassica carinata HOM05D009029 ORTHO05D009596 2.8e-67 258.8 171 72.5
BcaC03g18552 Brassica carinata HOM05D009029 ORTHO05D009596 8.2e-67 257.3 171 71.9
A02p04140 Brassica napus HOM05D009029 ORTHO05D009596 8.2e-67 257.3 171 71.9
C02p08990 Brassica napus HOM05D009029 ORTHO05D009596 8.2e-67 257.3 171 71.9
BolC2t06808H Brassica oleracea HOM05D009029 ORTHO05D009596 8.2e-67 257.3 171 71.9
BraA02t05377Z Brassica rapa HOM05D009029 ORTHO05D009596 8.2e-67 257.3 171 71.9
CARHR195870 Cardamine hirsuta HOM05D009029 ORTHO05D009596 1.5e-65 253.1 173 70.5
AL6G28410 Arabidopsis lyrata HOM05D009029 ORTHO05D009596 1.8e-61 239.6 172 67.4
AT5G17340 Arabidopsis thaliana HOM05D009029 ORTHO05D009596 3.9e-61 238.4 172 67.4
Carub.0006s1555 Capsella rubella HOM05D009029 ORTHO05D009596 6.7e-61 237.7 174 66.1
BcaC04g18801 Brassica carinata HOM05D009029 ORTHO05D009596 3.9e-53 211.8 162 64.8
C09p59800 Brassica napus HOM05D009029 ORTHO05D009596 6.1e-46 188.0 171 56.7
Carub.0006s1554 Capsella rubella HOM05D009029 ORTHO05D009596 6.1e-46 188.0 171 59.6
A10p22070 Brassica napus HOM05D009029 ORTHO05D009596 7.4e-44 181.0 167 56.9
BolC1t01146H Brassica oleracea HOM05D009029 ORTHO05D009596 2.2e-43 179.5 167 57.5
C09p59840 Brassica napus HOM05D009029 ORTHO05D009596 3.7e-43 178.7 166 57.2
BcaC09g51570 Brassica carinata HOM05D009029 ORTHO05D009596 8.2e-43 177.6 164 57.3
BraA10t44266Z Brassica rapa HOM05D009029 ORTHO05D009596 4.5e-41 171.8 165 55.2
C09p59860 Brassica napus HOM05D009029 ORTHO05D009596 1.3e-40 170.2 167 54.5
BcaB08g36782 Brassica carinata HOM05D009029 ORTHO05D009596 8.5e-40 167.5 167 53.3
BcaC04g18803 Brassica carinata HOM05D009029 ORTHO05D009596 1.4e-37 160.2 167 55.1
BolC9t58822H Brassica oleracea HOM05D009029 ORTHO05D009596 5.7e-36 154.8 152 53.9
CARHR195880 Cardamine hirsuta HOM05D009029 ORTHO05D009596 5.7e-36 154.8 105 70.5
BraA10t44265Z Brassica rapa HOM05D009029 ORTHO05D009596 8.5e-32 141.0 80 80.0
THA.LOC104827231 Tarenaya hassleriana HOM05D009029 ORTHO05D009596 2.6e-28 129.4 168 43.5
SpUn0004_0070 Schrenkiella parvula HOM05D009160 ORTHO05D009596 3.8e-24 115.5 170 41.2
SpUn0066_0020 Schrenkiella parvula HOM05D009160 ORTHO05D009596 3.8e-24 115.5 170 41.2
THA.LOC104820858 Tarenaya hassleriana HOM05D009029 ORTHO05D009596 8.5e-24 114.4 157 37.6
Sp6g26890 Schrenkiella parvula HOM05D009160 ORTHO05D009596 2.7e-22 109.4 173 40.5
Aa31LG11G12340 Aethionema arabicum HOM05D009029 ORTHO05D009596 4.7e-22 108.6 173 41.6
Thhalv10015780m.g Eutrema salsugineum HOM05D009160 ORTHO05D009596 3.7e-19 99.0 173 38.2
THA.LOC104821158 Tarenaya hassleriana HOM05D009029 ORTHO05D009596 4.9e-19 98.6 166 35.5
C09p59830 Brassica napus HOM05D009029 ORTHO05D009596 1.1e-18 97.4 112 51.8
Aa31LG11G12230 Aethionema arabicum HOM05D009029 ORTHO05D009596 3.1e-18 95.9 172 41.9
BcaB01g04931 Brassica carinata HOM05D009160 ORTHO05D009596 5.6e-15 85.1 168 36.9
BcaB01g04930 Brassica carinata HOM05D009160 ORTHO05D009596 1.2e-14 84.0 168 36.3
BcaB01g04927 Brassica carinata HOM05D009160 ORTHO05D009596 1.6e-14 83.6 168 35.7
BcaB01g05200 Brassica carinata HOM05D009160 ORTHO05D009596 1.6e-14 83.6 168 36.9
BolC3t13461H Brassica oleracea HOM05D009160 ORTHO05D009596 1.6e-14 83.6 168 36.9
BcaB01g04929 Brassica carinata HOM05D009160 ORTHO05D009596 2.8e-14 82.8 168 36.3
A03p08340 Brassica napus HOM05D009160 ORTHO05D009596 2.8e-14 82.8 162 32.1
C03p09710 Brassica napus HOM05D009160 ORTHO05D009596 2.8e-14 82.8 168 36.9
BcaB01g04928 Brassica carinata HOM05D009160 ORTHO05D009596 3.6e-14 82.4 168 35.7
BcaB01g05193 Brassica carinata HOM05D009160 ORTHO05D009596 1.4e-13 80.5 168 35.7
A03p08300 Brassica napus HOM05D009160 ORTHO05D009596 1.4e-13 80.5 168 35.7
C03p09670 Brassica napus HOM05D009160 ORTHO05D009596 1.4e-13 80.5 168 35.7
BolC3t13455H Brassica oleracea HOM05D009160 ORTHO05D009596 1.4e-13 80.5 168 35.7
Prupe.2G194700 Prunus persica HOM05D009029 ORTHO05D009596 1.4e-13 80.5 101 36.6
BraA03t10149Z Brassica rapa HOM05D009160 ORTHO05D009596 3.0e-13 79.3 168 33.3
BolC3t13454H Brassica oleracea HOM05D009160 ORTHO05D009596 4.0e-13 79.0 168 33.3
BraA03t10152Z Brassica rapa HOM05D009160 ORTHO05D009596 8.9e-13 77.8 168 33.9
BcaB01g04933 Brassica carinata HOM05D009160 ORTHO05D009596 1.2e-12 77.4 168 33.9
BcaB01g05201 Brassica carinata HOM05D009160 ORTHO05D009596 1.2e-12 77.4 168 32.7
BolC3t13462H Brassica oleracea HOM05D009160 ORTHO05D009596 1.2e-12 77.4 168 32.7
C03p09690 Brassica napus HOM05D009160 ORTHO05D009596 1.5e-12 77.0 168 33.9
BolC3t13456H Brassica oleracea HOM05D009160 ORTHO05D009596 3.4e-12 75.9 162 31.5
Thhalv10015886m.g Eutrema salsugineum HOM05D009160 ORTHO05D009596 3.4e-12 75.9 169 34.3
C03p09720 Brassica napus HOM05D009160 ORTHO05D009596 4.4e-12 75.5 168 32.1
C03p09660 Brassica napus HOM05D009160 ORTHO05D009596 9.8e-12 74.3 168 31.5
BolC3t13458H Brassica oleracea HOM05D009160 ORTHO05D009596 9.8e-12 74.3 168 32.7
C03p09680 Brassica napus HOM05D009160 ORTHO05D009596 1.7e-11 73.6 162 30.2
SpUn0004_0040 Schrenkiella parvula HOM05D009029 ORTHO05D009596 2.9e-11 72.8 94 46.8
BcaB01g05195 Brassica carinata HOM05D009160 ORTHO05D009596 3.7e-11 72.4 162 30.2
MD01G1086400 Malus domestica HOM05D009029 ORTHO05D009596 2.4e-10 69.7 105 37.1
BraA03t10150Z Brassica rapa HOM05D009160 ORTHO05D009596 1.2e-09 67.4 162 28.4
Duzib093G1752 Durio zibethinus HOM05D020091 ORTHO05D009596 1.2e-09 67.4 109 38.5
A03p08320 Brassica napus HOM05D009160 ORTHO05D009596 1.6e-09 67.0 84 41.7
A03p08310 Brassica napus HOM05D009160 ORTHO05D009596 3.5e-09 65.9 162 27.8
BcaC04g18805 Brassica carinata HOM05D009029 ORTHO05D009596 5.0e-08 62.0 32 78.1
Sp3g02310 Schrenkiella parvula HOM05D012509 ORTHO05D009596 7.3e-07 58.2 64 37.5


User provided reference genes

Program Settings