Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10014692m.g Eutrema salsugineum HOM05D004948 ORTHO05D005824 1.8e-111 406.0 208 100.0
Sp6g15460 Schrenkiella parvula HOM05D004948 ORTHO05D005824 2.6e-99 365.5 205 93.7
AL8G28010 Arabidopsis lyrata HOM05D004948 ORTHO05D005824 1.4e-97 359.8 208 90.9
Carub.0008s1349 Capsella rubella HOM05D004948 ORTHO05D005824 2.1e-96 355.9 205 91.7
AT5G53310 Arabidopsis thaliana HOM05D004948 ORTHO05D005824 5.7e-94 347.8 207 88.9
BcaB05g22031 Brassica carinata HOM05D004948 ORTHO05D005824 4.1e-92 341.7 208 87.0
BcaC03g14431 Brassica carinata HOM05D004948 ORTHO05D005824 4.5e-91 338.2 206 86.4
C02p18470 Brassica napus HOM05D004948 ORTHO05D005824 4.5e-91 338.2 206 86.4
BolC2t07987H Brassica oleracea HOM05D004948 ORTHO05D005824 4.5e-91 338.2 206 86.4
CARHR266350 Cardamine hirsuta HOM05D004948 ORTHO05D005824 2.2e-90 335.9 208 86.1
A02p11140 Brassica napus HOM05D004948 ORTHO05D005824 7.2e-89 330.9 206 84.5
BraA02t06177Z Brassica rapa HOM05D004948 ORTHO05D005824 7.2e-89 330.9 206 84.5
Aa31LG3G9220 Aethionema arabicum HOM05D004948 ORTHO05D005824 4.7e-88 328.2 206 83.5
Aa31LG5G23580 Aethionema arabicum HOM05D004948 ORTHO05D005824 1.7e-77 293.1 200 78.0
Aa31sc29G60 Aethionema arabicum HOM05D004948 ORTHO05D005824 4.8e-77 291.6 200 77.5
THA.LOC104800283 Tarenaya hassleriana HOM05D004948 ORTHO05D005824 4.2e-73 278.5 208 71.2
SalBow2G2244 Salvia bowleyana HOM05D004948 ORTHO05D005824 7.5e-70 267.7 210 68.1
Hma1.2p1_0142F.1_g064080 Hydrangea macrophylla HOM05D004948 ORTHO05D005824 3.7e-69 265.4 212 67.0
Cpa.g.sc3.41 Carica papaya HOM05D004948 ORTHO05D005824 4.8e-69 265.0 201 68.7
SGA_v2.0_scaffold10G05268 Striga asiatica HOM05D004948 ORTHO05D005824 4.8e-69 265.0 209 68.4
Eucgr.A02670 Eucalyptus grandis HOM05D004948 ORTHO05D005824 8.3e-69 264.2 217 65.4
Thecc.03G191700 Theobroma cacao HOM05D004948 ORTHO05D005824 1.6e-67 260.0 209 67.0
MSTRG.65 Avicennia marina HOM05D004948 ORTHO05D005824 4.5e-67 258.5 210 64.8
Duzib068G0205 Durio zibethinus HOM05D004948 ORTHO05D005824 1.0e-66 257.3 209 65.6
Migut.F01058 Erythranthe guttata HOM05D004948 ORTHO05D005824 1.0e-66 257.3 212 66.5
PGR083G1298 Punica granatum HOM05D004948 ORTHO05D005824 1.0e-66 257.3 208 68.3
COL.COLO4_04803 Corchorus olitorius HOM05D004948 ORTHO05D005824 2.3e-66 256.1 209 64.1
Actinidia34187 Actinidia chinensis HOM05D004948 ORTHO05D005824 2.9e-66 255.8 175 71.4
PGR042G1790 Punica granatum HOM05D004948 ORTHO05D005824 3.8e-66 255.4 175 74.9
Duzib205G0398 Durio zibethinus HOM05D004948 ORTHO05D005824 5.0e-66 255.0 208 66.8
MBI07_g20438_MAGBIO Magnolia biondii HOM05D004948 ORTHO05D005824 1.1e-65 253.8 175 70.9
Prupe.2G306200 Prunus persica HOM05D004948 ORTHO05D005824 1.1e-65 253.8 207 65.2
CiPaw.06G006800 Carya illinoinensis HOM05D004948 ORTHO05D005824 1.5e-65 253.4 201 64.2
Oeu037114.1 Olea europaea HOM05D004948 ORTHO05D005824 2.5e-65 252.7 165 75.8
Peaxi162Scf00904g00460 Petunia axillaris HOM05D004948 ORTHO05D005824 3.3e-65 252.3 185 69.2
GSVIVG01028728001 Vitis vinifera HOM05D004948 ORTHO05D005824 7.2e-65 251.1 175 71.4
Dinv28347 Davidia involucrata HOM05D004948 ORTHO05D005824 1.6e-64 250.0 204 66.2
BolC9t57186H Brassica oleracea HOM05D004948 ORTHO05D005824 2.8e-64 249.2 209 68.4
Atru.chr1.284 Acer truncatum HOM05D004948 ORTHO05D005824 3.6e-64 248.8 211 64.5
Gohir.A12G252400 Gossypium hirsutum HOM05D004948 ORTHO05D005824 3.6e-64 248.8 207 63.8
BcaC04g20470 Brassica carinata HOM05D004948 ORTHO05D005824 4.7e-64 248.4 209 67.9
Peaxi162Scf00618g00525 Petunia axillaris HOM05D004948 ORTHO05D005824 6.1e-64 248.1 200 64.5
CAN.G108.18 Capsicum annuum HOM05D004948 ORTHO05D005824 8.0e-64 247.7 175 69.7
PGSC0003DMG400028892 Solanum tuberosum HOM05D004948 ORTHO05D005824 8.0e-64 247.7 209 63.6
Potri.012G033100 Populus trichocarpa HOM05D004948 ORTHO05D005824 1.0e-63 247.3 212 63.2
PGSC0003DMG400009097 Solanum tuberosum HOM05D004948 ORTHO05D005824 1.0e-63 247.3 209 63.2
Solyc03g007480.3 Solanum lycopersicum HOM05D004948 ORTHO05D005824 1.8e-63 246.5 209 62.2
Cfa016354 Carpinus fangiana HOM05D004948 ORTHO05D005824 3.0e-63 245.7 208 61.5
Ciclev10005800m.g Citrus clementina HOM05D004948 ORTHO05D005824 4.0e-63 245.4 216 62.5
Dinv35301 Davidia involucrata HOM05D004948 ORTHO05D005824 4.0e-63 245.4 203 66.5
FAN10G0469 Fragaria x ananassa HOM05D004948 ORTHO05D005824 4.0e-63 245.4 175 70.3
FAN10G0476 Fragaria x ananassa HOM05D004948 ORTHO05D005824 4.0e-63 245.4 175 70.3
Gorai.008G271400 Gossypium raimondii HOM05D004948 ORTHO05D005824 4.0e-63 245.4 207 62.8
ClCG01G000640 Citrullus lanatus HOM05D004948 ORTHO05D005824 5.2e-63 245.0 182 67.0
TAR629G2953 Trochodendron aralioides HOM05D004948 ORTHO05D005824 5.2e-63 245.0 204 62.7
RcHm_v2.0_Chr1g0379991 Rosa chinensis HOM05D004948 ORTHO05D005824 6.8e-63 244.6 171 71.9
vmacro06582 Vaccinium macrocarpon HOM05D004948 ORTHO05D005824 6.8e-63 244.6 175 69.1
FAN06G2108 Fragaria x ananassa HOM05D004948 ORTHO05D005824 8.9e-63 244.2 175 69.7
Gohir.D12G253100 Gossypium hirsutum HOM05D004948 ORTHO05D005824 1.2e-62 243.8 207 62.3
Solyc06g051820.4 Solanum lycopersicum HOM05D004948 ORTHO05D005824 1.5e-62 243.4 204 63.7
QL09p011186 Quercus lobata HOM05D004948 ORTHO05D005824 2.0e-62 243.0 208 63.5
Sopen03g003430 Solanum pennellii HOM05D004948 ORTHO05D005824 2.0e-62 243.0 204 62.3
Sed0002242 Sechium edule HOM05D004948 ORTHO05D005824 3.4e-62 242.3 199 62.8
TAR636G2931 Trochodendron aralioides HOM05D004948 ORTHO05D005824 3.4e-62 242.3 206 63.6
FAN06G4897 Fragaria x ananassa HOM05D004948 ORTHO05D005824 4.4e-62 241.9 175 69.1
Rhsim03G0197700 Rhododendron simsii HOM05D004948 ORTHO05D005824 4.4e-62 241.9 202 62.9
MD01G1214200 Malus domestica HOM05D004948 ORTHO05D005824 5.7e-62 241.5 200 63.5
MELO3C005865.2 Cucumis melo HOM05D004948 ORTHO05D005824 1.3e-61 240.4 189 64.6
FAN01G0333 Fragaria x ananassa HOM05D004948 ORTHO05D005824 2.2e-61 239.6 198 64.6
CsaV3_5G000730 Cucumis sativus L. HOM05D004948 ORTHO05D005824 2.8e-61 239.2 192 64.1
Sopen06g017830 Solanum pennellii HOM05D004948 ORTHO05D005824 3.7e-61 238.8 209 61.7
Manes.06G156200 Manihot esculenta HOM05D004948 ORTHO05D005824 6.3e-61 238.0 204 61.3
arahy.Tifrunner.gnm1.ann1.LZU7FF Arachis hypogaea HOM05D004948 ORTHO05D005824 8.3e-61 237.7 198 61.6
Sc19g0001090 Simmondsia chinensis HOM05D004948 ORTHO05D005824 1.8e-60 236.5 212 61.3
Lj1g0018821 Lotus japonicus HOM05D004948 ORTHO05D005824 5.4e-60 235.0 209 58.9
MD07G1283800 Malus domestica HOM05D004948 ORTHO05D005824 5.4e-60 235.0 208 62.0
CANSAT21G0873 Cannabis sativa HOM05D004948 ORTHO05D005824 1.2e-59 233.8 209 58.4
Haze_00103 Corylus avellana HOM05D004948 ORTHO05D005824 1.2e-59 233.8 223 57.0
HanXRQChr13g0392981 Helianthus annuus HOM05D004948 ORTHO05D005824 1.2e-59 233.8 198 63.1
FvH4_7g30910 Fragaria vesca HOM05D004948 ORTHO05D005824 2.0e-59 233.0 206 62.1
Potri.015G023400 Populus trichocarpa HOM05D004948 ORTHO05D005824 2.0e-59 233.0 208 61.5
EL10Ac3g05356 Beta vulgaris HOM05D004948 ORTHO05D005824 2.7e-59 232.6 196 62.2
AUR62021051 Chenopodium quinoa HOM05D004948 ORTHO05D005824 2.7e-59 232.6 199 59.8
ECA233G3864 Erigeron canadensis HOM05D004948 ORTHO05D005824 2.7e-59 232.6 196 62.2
C09p43150 Brassica napus HOM05D004948 ORTHO05D005824 3.5e-59 232.3 199 67.3
AUR62031482 Chenopodium quinoa HOM05D004948 ORTHO05D005824 5.9e-59 231.5 199 58.8
DCAR_010636 Daucus carota HOM05D004948 ORTHO05D005824 1.0e-58 230.7 175 65.1
Aqoxy5G04108 Aquilegia oxysepala HOM05D004948 ORTHO05D005824 1.3e-58 230.3 205 59.5
Lsat_1_v5_gn_8_6120 Lactuca sativa HOM05D004948 ORTHO05D005824 5.0e-58 228.4 202 60.4
Lalb_Chr04g0263671 Lupinus albus HOM05D004948 ORTHO05D005824 8.6e-58 227.6 175 62.3
Glyma.13G040600 Glycine max HOM05D004948 ORTHO05D005824 1.2e-56 223.8 201 58.7
TWI23G0483 Tripterygium wilfordii HOM05D004948 ORTHO05D005824 1.2e-56 223.8 171 62.6
Duzib084G1367 Durio zibethinus HOM05D004948 ORTHO05D005824 8.0e-56 221.1 175 66.3
ATR1132G055 Amborella trichopoda HOM05D004948 ORTHO05D005824 1.8e-55 219.9 174 59.8
Lj1g0003063 Lotus japonicus HOM05D004948 ORTHO05D005824 1.8e-55 219.9 152 68.4
Cc02_g01980 Coffea canephora HOM05D004948 ORTHO05D005824 6.8e-55 218.0 181 62.4
Gohir.D09G178100 Gossypium hirsutum HOM05D004948 ORTHO05D005824 8.9e-55 217.6 206 55.3
Gorai.006G200200 Gossypium raimondii HOM05D004948 ORTHO05D005824 8.9e-55 217.6 206 55.3
FAN03G1348 Fragaria x ananassa HOM05D004948 ORTHO05D005824 1.2e-54 217.2 175 64.6
Os01g0621700 Oryza sativa ssp. japonica HOM05D004948 ORTHO05D005824 1.5e-54 216.9 168 60.7
Sabra12G0022300 Salix brachista HOM05D004948 ORTHO05D005824 2.6e-54 216.1 145 73.8
Gohir.A09G183400 Gossypium hirsutum HOM05D004948 ORTHO05D005824 7.5e-54 214.5 200 56.0
Manes.14G019200 Manihot esculenta HOM05D004948 ORTHO05D005824 1.3e-53 213.8 197 57.9
Nitab4.5_0001331g0180 Nicotiana tabacum HOM05D004948 ORTHO05D005824 1.3e-53 213.8 179 64.2
CAN.G204.5 Capsicum annuum HOM05D004948 ORTHO05D005824 2.9e-53 212.6 193 58.0
Hund27721 Selenicereus undatus HOM05D004948 ORTHO05D005824 4.9e-53 211.8 217 54.8
Hund27734 Selenicereus undatus HOM05D004948 ORTHO05D005824 4.9e-53 211.8 217 54.8
Nitab4.5_0000472g0200 Nicotiana tabacum HOM05D004948 ORTHO05D005824 8.3e-53 211.1 179 64.2
TPR.G33862 Trifolium pratense HOM05D004948 ORTHO05D005824 8.3e-53 211.1 155 63.9
Actinidia31860 Actinidia chinensis HOM05D004948 ORTHO05D005824 1.4e-52 210.3 203 56.2
Ca_16670_v3 Cicer arietinum L. HOM05D004948 ORTHO05D005824 1.9e-52 209.9 157 64.3
Nn2g13651 Nelumbo nucifera HOM05D004948 ORTHO05D005824 4.1e-52 208.8 145 69.7
HPP92_024433 Vanilla planifolia HOM05D004948 ORTHO05D005824 1.2e-51 207.2 152 64.5
CDE04G0161 Ceratophyllum demersum HOM05D004948 ORTHO05D005824 1.6e-51 206.8 175 56.0
Psat0s97g0080 Pisum sativum HOM05D004948 ORTHO05D005824 4.6e-51 205.3 155 63.2
arahy.Tifrunner.gnm1.ann1.NIM4HJ Arachis hypogaea HOM05D004948 ORTHO05D005824 1.7e-50 203.4 156 62.2
Lalb_Chr08g0240671 Lupinus albus HOM05D004948 ORTHO05D005824 5.0e-50 201.8 157 62.4
arahy.Tifrunner.gnm1.ann1.MD6354 Arachis hypogaea HOM05D004948 ORTHO05D005824 6.6e-50 201.4 168 62.5
Glyma.04G238900 Glycine max HOM05D004948 ORTHO05D005824 1.1e-49 200.7 155 64.5
DCAR_014528 Daucus carota HOM05D000121 ORTHO05D005824 3.3e-49 199.1 164 57.9
Lj3A912T42 Lonicera japonica HOM05D004948 ORTHO05D005824 7.3e-49 198.0 182 59.3
Phvul.009G135700 Phaseolus vulgaris HOM05D004948 ORTHO05D005824 1.2e-48 197.2 155 62.6
Medtr3g090670 Medicago truncatula HOM05D004948 ORTHO05D005824 2.1e-48 196.4 145 62.8
Nitab4.5_0002176g0030 Nicotiana tabacum HOM05D004948 ORTHO05D005824 4.7e-48 195.3 128 74.2
Glyma.06G124800 Glycine max HOM05D004948 ORTHO05D005824 6.2e-48 194.9 178 56.7
unitig_747.g21853 Utricularia gibba HOM05D004948 ORTHO05D005824 8.0e-48 194.5 208 52.4
arahy.Tifrunner.gnm1.ann1.AMC2P5 Arachis hypogaea HOM05D004948 ORTHO05D005824 1.4e-47 193.7 166 57.8
Zm00001eb432120 Zea mays HOM05D004948 ORTHO05D005824 1.4e-47 193.7 142 66.2
VMungo1309G3087 Vigna mungo HOM05D004948 ORTHO05D005824 1.8e-47 193.4 168 56.5
DCAR_008996 Daucus carota HOM05D002473 ORTHO05D005824 4.0e-47 192.2 153 60.8
TWI39G0355 Tripterygium wilfordii HOM05D004948 ORTHO05D005824 1.5e-46 190.3 137 66.4
Ah.07g206090 Amaranthus hybridus HOM05D004948 ORTHO05D005824 1.7e-45 186.8 132 68.2
Actinidia08617 Actinidia chinensis HOM05D004948 ORTHO05D005824 1.6e-43 180.3 144 64.6
CSS0002011 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 1.9e-41 173.3 118 71.2
BcaB08g35692 Brassica carinata HOM05D004948 ORTHO05D005824 3.3e-41 172.6 94 91.5
Mapoly0143s0028 Marchantia polymorpha HOM05D004948 ORTHO05D005824 4.0e-39 165.6 173 46.8
SHI54648 Sapria himalayana HOM05D004948 ORTHO05D005824 4.4e-38 162.2 163 53.4
SHI54754 Sapria himalayana HOM05D004948 ORTHO05D005824 4.4e-38 162.2 163 53.4
CSS0025713 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 6.4e-37 158.3 106 70.8
SEGI_09652 Sequoiadendron giganteum HOM05D004948 ORTHO05D005824 8.3e-37 157.9 137 55.5
CSS0008262 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 1.9e-36 156.8 106 69.8
Pp3c8_900 Physcomitrium patens HOM05D004948 ORTHO05D005824 1.6e-35 153.7 182 45.1
AagrBONN_evm.TU.Sc2ySwM_362.1882 Anthoceros agrestis HOM05D004948 ORTHO05D005824 2.7e-35 152.9 189 42.9
SMO361G0401 Selaginella moellendorffii HOM05D004948 ORTHO05D005824 6.0e-35 151.8 194 42.8
Lj1P1012T60 Lonicera japonica HOM05D004948 ORTHO05D005824 2.8e-32 142.9 108 63.9
CBR_g39340 Chara braunii HOM05D004948 ORTHO05D005824 2.4e-31 139.8 160 40.6
Lalb_Chr23g0271431 Lupinus albus HOM05D004948 ORTHO05D005824 2.7e-19 99.8 157 40.1
MCO05G504 Micromonas commoda HOM05D004948 ORTHO05D005824 1.1e-15 87.8 193 30.6
CSS0022164 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 1.2e-06 57.8 59 55.9


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