Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10014687m.g Eutrema salsugineum HOM05D005571 ORTHO05D006919 1.2e-107 393.3 209 100.0
Sp6g25100 Schrenkiella parvula HOM05D005571 ORTHO05D006919 1.3e-85 320.1 209 84.2
CARHR284960 Cardamine hirsuta HOM05D005571 ORTHO05D006919 1.1e-68 263.8 221 71.5
AL8G19260 Arabidopsis lyrata HOM05D005571 ORTHO05D006919 9.2e-68 260.8 218 75.2
AT5G42330 Arabidopsis thaliana HOM05D005571 ORTHO05D006919 1.1e-65 253.8 216 73.6
BcaB01g04868 Brassica carinata HOM05D005571 ORTHO05D006919 1.1e-65 253.8 222 72.5
A03p09420 Brassica napus HOM05D005571 ORTHO05D006919 3.3e-65 252.3 217 71.0
BraA03t10260Z Brassica rapa HOM05D005571 ORTHO05D006919 3.3e-65 252.3 217 71.0
BolC3t13569H Brassica oleracea HOM05D005571 ORTHO05D006919 7.3e-65 251.1 218 72.0
C03p11000 Brassica napus HOM05D005571 ORTHO05D006919 9.5e-65 250.8 217 71.9
BcaB01g05139 Brassica carinata HOM05D005571 ORTHO05D006919 1.6e-64 250.0 217 71.9
Carub.0008s0685 Capsella rubella HOM05D005571 ORTHO05D006919 2.6e-62 242.7 217 71.0
Aa31LG9G12460 Aethionema arabicum HOM05D005571 ORTHO05D006919 1.0e-58 230.7 221 67.9
BcaB08g36584 Brassica carinata HOM05D005571 ORTHO05D006919 6.4e-53 211.5 228 65.8
THA.LOC104825425 Tarenaya hassleriana HOM05D005571 ORTHO05D006919 6.6e-42 174.9 219 55.3
THA.LOC104813174 Tarenaya hassleriana HOM05D005571 ORTHO05D006919 9.6e-41 171.0 219 54.3
BcaC04g18579 Brassica carinata HOM05D005571 ORTHO05D006919 9.0e-39 164.5 185 60.5
C09p56960 Brassica napus HOM05D005571 ORTHO05D006919 9.0e-39 164.5 185 60.5
BolC9t58559H Brassica oleracea HOM05D005571 ORTHO05D006919 9.0e-39 164.5 185 60.5
A10p20370 Brassica napus HOM05D005571 ORTHO05D006919 1.9e-36 156.8 222 53.6
Potri.005G250800 Populus trichocarpa HOM05D005571 ORTHO05D006919 6.6e-34 148.3 223 50.2
Ciclev10002509m.g Citrus clementina HOM05D005571 ORTHO05D006919 1.1e-33 147.5 216 49.5
Thecc.08G059400 Theobroma cacao HOM05D005571 ORTHO05D006919 4.3e-33 145.6 225 49.3
COL.COLO4_05218 Corchorus olitorius HOM05D005571 ORTHO05D006919 1.6e-32 143.7 211 48.8
Sabra05G0194000 Salix brachista HOM05D005571 ORTHO05D006919 6.2e-32 141.7 223 49.8
ClCG08G009410 Citrullus lanatus HOM05D005571 ORTHO05D006919 2.4e-31 139.8 225 49.3
MELO3C026535.2 Cucumis melo HOM05D005571 ORTHO05D006919 4.0e-31 139.0 227 47.1
CsaV3_6G031520 Cucumis sativus L. HOM05D005571 ORTHO05D006919 9.0e-31 137.9 227 46.7
TWI56G1114 Tripterygium wilfordii HOM05D005571 ORTHO05D006919 2.0e-30 136.7 223 48.9
BraA10t44107Z Brassica rapa HOM05D005571 ORTHO05D006919 1.3e-29 134.0 203 46.8
Duzib116G0932 Durio zibethinus HOM05D005571 ORTHO05D006919 1.3e-29 134.0 223 45.3
vmacro21809 Vaccinium macrocarpon HOM05D005571 ORTHO05D006919 4.2e-28 129.0 220 45.9
GSVIVG01008671001 Vitis vinifera HOM05D005571 ORTHO05D006919 4.2e-28 129.0 220 45.5
Gohir.D05G182600 Gossypium hirsutum HOM05D005571 ORTHO05D006919 7.1e-28 128.3 230 45.7
Gorai.009G187900 Gossypium raimondii HOM05D005571 ORTHO05D006919 7.1e-28 128.3 230 45.7
Oeu035840.1 Olea europaea HOM05D005571 ORTHO05D006919 7.1e-28 128.3 209 45.5
Gohir.A05G179400 Gossypium hirsutum HOM05D005571 ORTHO05D006919 9.3e-28 127.9 230 45.2
Oeu064631.1 Olea europaea HOM05D005571 ORTHO05D006919 9.3e-28 127.9 207 47.3
Sed0002015 Sechium edule HOM05D005571 ORTHO05D006919 9.3e-28 127.9 223 43.9
CiPaw.07G138600 Carya illinoinensis HOM05D005571 ORTHO05D006919 1.6e-27 127.1 197 49.7
Gorai.005G113600 Gossypium raimondii HOM05D005571 ORTHO05D006919 1.6e-27 127.1 205 46.8
Haze_22782 Corylus avellana HOM05D005571 ORTHO05D006919 3.5e-27 125.9 221 44.3
FvH4_2g37430 Fragaria vesca HOM05D005571 ORTHO05D006919 1.0e-26 124.4 202 52.0
Gohir.D02G100200 Gossypium hirsutum HOM05D005571 ORTHO05D006919 1.0e-26 124.4 205 46.3
Lj1g0015612 Lotus japonicus HOM05D005571 ORTHO05D006919 1.0e-26 124.4 200 52.0
Potri.002G010400 Populus trichocarpa HOM05D005571 ORTHO05D006919 1.0e-26 124.4 221 44.8
CiPaw.08G073400 Carya illinoinensis HOM05D005571 ORTHO05D006919 1.3e-26 124.0 210 45.7
arahy.Tifrunner.gnm1.ann1.G9B5FS Arachis hypogaea HOM05D005571 ORTHO05D006919 3.0e-26 122.9 226 46.9
PGR083G0609 Punica granatum HOM05D005571 ORTHO05D006919 3.0e-26 122.9 232 47.8
FAN20G2818 Fragaria x ananassa HOM05D005571 ORTHO05D006919 3.9e-26 122.5 222 49.5
arahy.Tifrunner.gnm1.ann1.VC4QUA Arachis hypogaea HOM05D005571 ORTHO05D006919 5.1e-26 122.1 204 49.0
A02p05480 Brassica napus HOM05D005571 ORTHO05D006919 5.1e-26 122.1 137 56.9
BraA02t05499Z Brassica rapa HOM05D005571 ORTHO05D006919 5.1e-26 122.1 137 56.9
Glyma.04G017800 Glycine max HOM05D005571 ORTHO05D006919 5.1e-26 122.1 221 49.3
RcHm_v2.0_Chr6g0304291 Rosa chinensis HOM05D005571 ORTHO05D006919 5.1e-26 122.1 197 49.7
Aqoxy6G01708 Aquilegia oxysepala HOM05D005571 ORTHO05D006919 6.7e-26 121.7 224 43.3
BcaC03g13663 Brassica carinata HOM05D005571 ORTHO05D006919 6.7e-26 121.7 137 58.4
BNapus_Darmor_BZH_scaffold_38p02630 Brassica napus HOM05D005571 ORTHO05D006919 6.7e-26 121.7 137 58.4
Glyma.06G018100 Glycine max HOM05D005571 ORTHO05D006919 8.7e-26 121.3 221 47.5
Lj4A11T70 Lonicera japonica HOM05D005571 ORTHO05D006919 1.1e-25 120.9 223 41.7
Sabra02G0007800 Salix brachista HOM05D005571 ORTHO05D006919 1.1e-25 120.9 220 45.0
Actinidia15492 Actinidia chinensis HOM05D005571 ORTHO05D006919 1.5e-25 120.6 216 44.4
Duzib093G0863 Durio zibethinus HOM05D005571 ORTHO05D006919 1.5e-25 120.6 223 42.6
Actinidia17042 Actinidia chinensis HOM05D005571 ORTHO05D006919 1.9e-25 120.2 219 44.7
QL02p014184 Quercus lobata HOM05D005571 ORTHO05D006919 1.9e-25 120.2 217 43.3
FAN27G2782 Fragaria x ananassa HOM05D005571 ORTHO05D006919 4.3e-25 119.0 222 49.5
Nitab4.5_0000588g0080 Nicotiana tabacum HOM05D005571 ORTHO05D006919 4.3e-25 119.0 222 44.6
TWI12G0392 Tripterygium wilfordii HOM05D005571 ORTHO05D006919 4.3e-25 119.0 227 44.5
Manes.18G005301 Manihot esculenta HOM05D005571 ORTHO05D006919 9.6e-25 117.9 209 43.1
CAN.G311.116 Capsicum annuum HOM05D005571 ORTHO05D006919 1.3e-24 117.5 220 40.9
Cfa014080 Carpinus fangiana HOM05D005571 ORTHO05D006919 1.3e-24 117.5 221 43.0
Rhsim06G0007100 Rhododendron simsii HOM05D005571 ORTHO05D006919 1.6e-24 117.1 204 46.6
VMungo1309G0957 Vigna mungo HOM05D005571 ORTHO05D006919 2.1e-24 116.7 217 46.1
Sopen04g035980 Solanum pennellii HOM05D005571 ORTHO05D006919 2.8e-24 116.3 222 42.8
Manes.05G133900 Manihot esculenta HOM05D005571 ORTHO05D006919 3.7e-24 115.9 206 43.7
Peaxi162Scf00893g00005 Petunia axillaris HOM05D005571 ORTHO05D006919 1.1e-23 114.4 216 40.3
CANSAT25G0564 Cannabis sativa HOM05D005571 ORTHO05D006919 2.4e-23 113.2 223 44.4
Medtr3g115300 Medicago truncatula HOM05D005571 ORTHO05D006919 2.4e-23 113.2 226 42.5
MSTRG.24929 Avicennia marina HOM05D005571 ORTHO05D006919 5.3e-23 112.1 220 43.6
TPR.G38112 Trifolium pratense HOM05D005571 ORTHO05D006919 5.3e-23 112.1 220 43.2
CSS0029462 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 9.0e-23 111.3 200 43.5
PGSC0003DMG400009903 Solanum tuberosum HOM05D005571 ORTHO05D006919 9.0e-23 111.3 217 40.1
FAN15G1374 Fragaria x ananassa HOM05D005571 ORTHO05D006919 1.2e-22 110.9 201 49.8
Lalb_Chr23g0265781 Lupinus albus HOM05D005571 ORTHO05D006919 2.0e-22 110.2 216 44.4
Dinv05532 Davidia involucrata HOM05D005571 ORTHO05D006919 2.6e-22 109.8 216 42.1
CSS0030992 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 4.5e-22 109.0 222 44.6
Phvul.009G010900 Phaseolus vulgaris HOM05D005571 ORTHO05D006919 4.5e-22 109.0 216 45.4
Migut.C00385 Erythranthe guttata HOM05D005571 ORTHO05D006919 5.8e-22 108.6 238 41.6
SGA_v2.0_scaffold133G34635 Striga asiatica HOM05D005571 ORTHO05D006919 7.6e-22 108.2 225 42.2
SalBow7G0698 Salvia bowleyana HOM05D005571 ORTHO05D006919 4.9e-21 105.5 223 40.4
Cc10_g00650 Coffea canephora HOM05D005571 ORTHO05D006919 6.5e-21 105.1 230 40.4
DCAR_009532 Daucus carota HOM05D005571 ORTHO05D006919 1.4e-20 104.0 226 41.2
MSTRG.977 Avicennia marina HOM05D005571 ORTHO05D006919 1.9e-20 103.6 196 39.8
Sc02g0009100 Simmondsia chinensis HOM05D005571 ORTHO05D006919 4.2e-20 102.4 208 40.9
Atru.chr13.137 Acer truncatum HOM05D005571 ORTHO05D006919 7.1e-20 101.7 161 48.4
TAR628G0603 Trochodendron aralioides HOM05D005571 ORTHO05D006919 7.1e-20 101.7 222 42.3
Lsat_1_v5_gn_2_4041 Lactuca sativa HOM05D005571 ORTHO05D006919 9.3e-20 101.3 235 37.0
HanXRQChr06g0183961 Helianthus annuus HOM05D005571 ORTHO05D006919 1.2e-19 100.9 212 41.5
SalBow5G5667 Salvia bowleyana HOM05D005571 ORTHO05D006919 2.7e-19 99.8 203 41.4
Cfa012650 Carpinus fangiana HOM05D005571 ORTHO05D006919 1.8e-18 97.1 191 43.5
HanXRQChr14g0428071 Helianthus annuus HOM05D005571 ORTHO05D006919 5.1e-18 95.5 228 39.0
unitig_747.g21542 Utricularia gibba HOM05D005571 ORTHO05D006919 6.7e-18 95.1 226 37.2
Hma1.2p1_0157F.1_g069390 Hydrangea macrophylla HOM05D005571 ORTHO05D006919 8.7e-18 94.7 212 41.0
Hund01764 Selenicereus undatus HOM05D005571 ORTHO05D006919 1.1e-17 94.4 209 39.7
CSS0039739 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 4.3e-17 92.4 204 41.2
Prupe.1G354300 Prunus persica HOM05D005571 ORTHO05D006919 5.7e-17 92.0 247 38.1
EL10Ac1g01953 Beta vulgaris HOM05D005571 ORTHO05D006919 9.6e-17 91.3 217 38.7
Oeu000692.1 Olea europaea HOM05D005571 ORTHO05D006919 9.6e-17 91.3 220 37.3
Psat0s2670g0120 Pisum sativum HOM05D005571 ORTHO05D006919 1.6e-16 90.5 210 38.1
Nn6g31737 Nelumbo nucifera HOM05D005571 ORTHO05D006919 2.8e-16 89.7 211 41.2
Ca_15432_v3 Cicer arietinum L. HOM05D005571 ORTHO05D006919 4.8e-16 89.0 186 40.9
Ca_15457_v3 Cicer arietinum L. HOM05D005571 ORTHO05D006919 4.8e-16 89.0 186 40.9
PSO675G2006 Papaver somniferum HOM05D005571 ORTHO05D006919 9.0e-15 84.7 217 37.3
Sabra11G0114300 Salix brachista HOM05D005571 ORTHO05D006919 1.5e-14 84.0 128 52.3
Ah.11g041150 Amaranthus hybridus HOM05D005571 ORTHO05D006919 3.4e-14 82.8 215 37.7
CSS0038566 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 4.5e-14 82.4 215 35.8
Hund05103 Selenicereus undatus HOM05D001348 ORTHO05D002788 4.5e-14 82.4 213 37.1
PSO541G4697 Papaver somniferum HOM05D005571 ORTHO05D006919 5.8e-14 82.0 217 36.9
AUR62040795 Chenopodium quinoa HOM05D005571 ORTHO05D006919 2.9e-13 79.7 215 34.4
ECA238G3324 Erigeron canadensis HOM05D005571 ORTHO05D007881 1.9e-12 77.0 176 40.9
Dinv31944 Davidia involucrata HOM05D005571 ORTHO05D006919 7.1e-12 75.1 215 38.6
unitig_0.g2084 Utricularia gibba HOM05D005571 ORTHO05D006919 4.6e-11 72.4 174 37.4
MBI05_g43168_MAGBIO Magnolia biondii HOM05D005571 ORTHO05D006919 2.3e-10 70.1 222 34.7
SHI42933 Sapria himalayana HOM05D005571 ORTHO05D006919 1.3e-08 64.3 185 30.3
Cpa.g.c36471 Carica papaya HOM05D005571 ORTHO05D006919 2.2e-08 63.5 84 57.1
Sc15g0004410 Simmondsia chinensis HOM05D005571 ORTHO05D006919 8.2e-08 61.6 181 33.1
Duzib128G0429 Durio zibethinus HOM05D005571 ORTHO05D006919 5.3e-07 58.9 99 47.5
CDE05G1909 Ceratophyllum demersum HOM05D005571 ORTHO05D006919 1.5e-06 57.4 189 29.6


User provided reference genes

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