Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10014587m.g Eutrema salsugineum HOM05D007846 ORTHO05D010837 6.5e-43 178.3 169 100.0
Thhalv10014560m.g Eutrema salsugineum HOM05D007846 ORTHO05D010837 1.3e-27 127.5 173 57.2
Sp6g35350 Schrenkiella parvula HOM05D007846 ORTHO05D010837 1.4e-24 117.5 81 85.2
C09p69650 Brassica napus HOM05D007846 ORTHO05D010837 9.1e-21 104.8 80 75.0
BolC9t59708H Brassica oleracea HOM05D007846 ORTHO05D010837 9.1e-21 104.8 80 75.0
Sp6g35340 Schrenkiella parvula HOM05D007846 ORTHO05D371621 1.5e-15 87.4 83 63.9
BcaC06g32428 Brassica carinata HOM05D007846 ORTHO05D010837 9.8e-15 84.7 145 46.2
C09p69640 Brassica napus HOM05D007846 ORTHO05D010837 9.8e-15 84.7 145 46.2
BolC9t59707H Brassica oleracea HOM05D007846 ORTHO05D010837 9.8e-15 84.7 145 46.2
A10p29250 Brassica napus HOM05D007846 ORTHO05D010837 6.4e-14 82.0 145 44.8
BraA10t44971Z Brassica rapa HOM05D007846 ORTHO05D010837 6.4e-14 82.0 145 44.8
AT5G07530 Arabidopsis thaliana HOM05D007846 ORTHO05D010837 1.8e-13 80.5 61 72.1
BcaC06g32487 Brassica carinata HOM05D007846 ORTHO05D010837 1.8e-13 80.5 58 77.6
BcaB01g06046 Brassica carinata HOM05D007846 ORTHO05D010837 2.4e-13 80.1 58 79.3
BolC3t12914H Brassica oleracea HOM05D007846 ORTHO05D010837 2.4e-13 80.1 58 79.3
BcaC06g32488 Brassica carinata HOM05D021341 ORTHO05D093304 3.2e-13 79.7 76 61.8
Carub.0006s0651 Capsella rubella HOM05D007846 ORTHO05D010837 4.1e-13 79.3 60 71.7
AL6G17840 Arabidopsis lyrata HOM05D007846 ORTHO05D010837 5.4e-13 79.0 58 75.9
BcaC03g13199 Brassica carinata HOM05D007846 ORTHO05D010837 7.0e-13 78.6 61 77.0
A03p03350 Brassica napus HOM05D007846 ORTHO05D010837 7.0e-13 78.6 78 62.8
C02p03150 Brassica napus HOM05D007846 ORTHO05D010837 7.0e-13 78.6 61 77.0
BcaC06g32486 Brassica carinata HOM05D007846 ORTHO05D010837 9.2e-13 78.2 156 40.4
C03p03790 Brassica napus HOM05D007846 ORTHO05D010837 1.6e-12 77.4 80 58.8
Thhalv10013795m.g Eutrema salsugineum HOM05D007846 ORTHO05D195878 1.6e-12 77.4 102 52.0
BcaB01g06047 Brassica carinata HOM05D007846 ORTHO05D010837 2.7e-12 76.6 58 74.1
BcaB01g06048 Brassica carinata HOM05D007846 ORTHO05D010837 2.7e-12 76.6 58 74.1
BraA02t04921Z Brassica rapa HOM05D007846 ORTHO05D010837 2.7e-12 76.6 58 79.3
BolC2t06277H Brassica oleracea HOM05D007846 ORTHO05D010837 7.8e-12 75.1 58 77.6
BolC8t49462H Brassica oleracea HOM05D007846 ORTHO05D010837 1.0e-11 74.7 58 79.3
BraA08t34994Z Brassica rapa HOM05D007846 ORTHO05D010837 1.0e-11 74.7 58 79.3
BcaB01g05692 Brassica carinata HOM05D007846 ORTHO05D010837 1.3e-11 74.3 58 74.1
C08p18270 Brassica napus HOM05D007846 ORTHO05D010837 2.3e-11 73.6 58 77.6
CARHR205620 Cardamine hirsuta HOM05D007846 ORTHO05D010837 2.3e-11 73.6 76 51.3
AL6G17910 Arabidopsis lyrata HOM05D007846 ORTHO05D010837 1.1e-10 71.2 58 70.7
AL6G17830 Arabidopsis lyrata HOM05D007846 ORTHO05D010837 1.9e-10 70.5 133 41.4
AT5G07520 Arabidopsis thaliana HOM05D007846 ORTHO05D010837 2.5e-10 70.1 58 69.0
A10p29260 Brassica napus HOM05D007846 ORTHO05D010837 2.5e-10 70.1 80 55.0
BraA10t44972Z Brassica rapa HOM05D007846 ORTHO05D010837 2.5e-10 70.1 80 55.0
BcaB05g21610 Brassica carinata HOM05D007846 ORTHO05D010837 3.3e-10 69.7 83 53.0
AT5G07600 Arabidopsis thaliana HOM05D007846 ORTHO05D010837 9.5e-10 68.2 58 67.2
Carub.0006s0650 Capsella rubella HOM05D007846 ORTHO05D010837 2.1e-09 67.0 58 65.5
Carub.0006s0658 Capsella rubella HOM05D007846 ORTHO05D010837 3.6e-09 66.2 58 63.8
A03p03340 Brassica napus HOM05D007846 ORTHO05D010837 4.7e-09 65.9 58 69.0
BraA03t09686Z Brassica rapa HOM05D007846 ORTHO05D010837 4.7e-09 65.9 58 69.0
BraA02t04922Z Brassica rapa HOM05D007846 ORTHO05D010837 6.2e-09 65.5 81 53.1
BcaC03g13197 Brassica carinata HOM05D007846 ORTHO05D010837 1.0e-08 64.7 81 53.1
C02p03180 Brassica napus HOM05D007846 ORTHO05D010837 1.0e-08 64.7 81 53.1
BolC2t06280H Brassica oleracea HOM05D007846 ORTHO05D010837 1.0e-08 64.7 81 53.1
AL6G17850 Arabidopsis lyrata HOM05D007846 ORTHO05D031404 4.0e-08 62.8 58 58.6
AT5G07510 Arabidopsis thaliana HOM05D007846 ORTHO05D038626 5.2e-08 62.4 59 62.7
Sp6g35330 Schrenkiella parvula HOM05D007846 ORTHO05D021761 5.2e-08 62.4 58 58.6
AT5G07540 Arabidopsis thaliana HOM05D007846 ORTHO05D031404 6.8e-08 62.0 58 58.6
AL6G17810 Arabidopsis lyrata HOM05D007846 ORTHO05D038626 1.5e-07 60.8 59 62.7
Carub.0006s0653 Capsella rubella HOM05D007846 ORTHO05D000624 3.7e-06 56.2 51 56.9
Thhalv10015090m.g Eutrema salsugineum HOM05D007846 ORTHO05D000624 8.3e-06 55.1 51 60.8


User provided reference genes

Program Settings