Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10014560m.g Eutrema salsugineum HOM05D007846 ORTHO05D010837 4.8e-81 305.1 194 100.0
Thhalv10014587m.g Eutrema salsugineum HOM05D007846 ORTHO05D010837 2.0e-26 123.6 173 57.2
Sp6g35350 Schrenkiella parvula HOM05D007846 ORTHO05D010837 7.5e-26 121.7 185 57.3
C09p69650 Brassica napus HOM05D007846 ORTHO05D010837 7.8e-23 111.7 145 51.7
BolC9t59708H Brassica oleracea HOM05D007846 ORTHO05D010837 7.8e-23 111.7 145 51.7
A10p29250 Brassica napus HOM05D007846 ORTHO05D010837 1.5e-21 107.5 160 50.6
BraA10t44971Z Brassica rapa HOM05D007846 ORTHO05D010837 1.5e-21 107.5 160 50.6
BcaC06g32428 Brassica carinata HOM05D007846 ORTHO05D010837 2.5e-21 106.7 157 51.6
C09p69640 Brassica napus HOM05D007846 ORTHO05D010837 2.5e-21 106.7 157 51.6
BolC9t59707H Brassica oleracea HOM05D007846 ORTHO05D010837 2.5e-21 106.7 157 51.6
BcaC06g32486 Brassica carinata HOM05D007846 ORTHO05D010837 4.3e-21 105.9 152 50.0
BcaC03g13199 Brassica carinata HOM05D007846 ORTHO05D010837 1.3e-17 94.4 133 50.4
C02p03150 Brassica napus HOM05D007846 ORTHO05D010837 1.3e-17 94.4 133 50.4
BraA02t04921Z Brassica rapa HOM05D007846 ORTHO05D010837 8.3e-17 91.7 130 50.8
BolC2t06277H Brassica oleracea HOM05D007846 ORTHO05D010837 1.9e-16 90.5 130 50.0
AT5G07520 Arabidopsis thaliana HOM05D007846 ORTHO05D010837 2.4e-16 90.1 154 45.5
BcaC06g32487 Brassica carinata HOM05D007846 ORTHO05D010837 3.2e-16 89.7 83 61.4
BolC8t49462H Brassica oleracea HOM05D007846 ORTHO05D010837 5.4e-16 89.0 153 44.4
AL6G17840 Arabidopsis lyrata HOM05D007846 ORTHO05D010837 7.1e-16 88.6 144 43.8
Carub.0006s0651 Capsella rubella HOM05D007846 ORTHO05D010837 7.1e-16 88.6 146 42.5
C08p18270 Brassica napus HOM05D007846 ORTHO05D010837 1.2e-15 87.8 153 43.8
BraA08t34994Z Brassica rapa HOM05D007846 ORTHO05D010837 2.7e-15 86.7 140 49.3
BcaB01g06046 Brassica carinata HOM05D007846 ORTHO05D010837 3.5e-15 86.3 82 62.2
BolC3t12914H Brassica oleracea HOM05D007846 ORTHO05D010837 3.5e-15 86.3 82 62.2
Thhalv10013795m.g Eutrema salsugineum HOM05D007846 ORTHO05D195878 3.5e-15 86.3 126 56.3
A03p03350 Brassica napus HOM05D007846 ORTHO05D010837 7.8e-15 85.1 104 53.8
Carub.0006s0650 Capsella rubella HOM05D007846 ORTHO05D010837 7.8e-15 85.1 155 41.3
AL6G17830 Arabidopsis lyrata HOM05D007846 ORTHO05D010837 2.3e-14 83.6 158 44.3
C03p03790 Brassica napus HOM05D007846 ORTHO05D010837 3.0e-14 83.2 104 51.9
Sp6g35340 Schrenkiella parvula HOM05D007846 ORTHO05D371621 3.0e-14 83.2 83 61.4
BcaB01g05692 Brassica carinata HOM05D007846 ORTHO05D010837 3.9e-14 82.8 82 61.0
BcaB01g06047 Brassica carinata HOM05D007846 ORTHO05D010837 5.1e-14 82.4 82 58.5
BcaB01g06048 Brassica carinata HOM05D007846 ORTHO05D010837 5.1e-14 82.4 82 58.5
AT5G07530 Arabidopsis thaliana HOM05D007846 ORTHO05D010837 1.1e-13 81.3 147 42.9
A10p29260 Brassica napus HOM05D007846 ORTHO05D010837 2.5e-13 80.1 174 39.7
BraA10t44972Z Brassica rapa HOM05D007846 ORTHO05D010837 2.5e-13 80.1 174 39.7
AL6G17910 Arabidopsis lyrata HOM05D007846 ORTHO05D010837 9.5e-13 78.2 129 45.7
BcaC06g32488 Brassica carinata HOM05D021341 ORTHO05D093304 9.5e-13 78.2 76 59.2
BcaB05g21610 Brassica carinata HOM05D007846 ORTHO05D010837 2.8e-12 76.6 107 46.7
AT5G07600 Arabidopsis thaliana HOM05D007846 ORTHO05D010837 3.6e-12 76.3 86 54.7
CARHR205620 Cardamine hirsuta HOM05D007846 ORTHO05D010837 1.4e-11 74.3 100 42.0
AL6G17850 Arabidopsis lyrata HOM05D007846 ORTHO05D031404 4.0e-11 72.8 81 50.6
AT5G07540 Arabidopsis thaliana HOM05D007846 ORTHO05D031404 4.0e-11 72.8 82 50.0
A03p03340 Brassica napus HOM05D007846 ORTHO05D010837 6.8e-11 72.0 82 54.9
BraA03t09686Z Brassica rapa HOM05D007846 ORTHO05D010837 6.8e-11 72.0 82 54.9
Sp6g35330 Schrenkiella parvula HOM05D007846 ORTHO05D021761 2.6e-10 70.1 82 51.2
AT5G07510 Arabidopsis thaliana HOM05D007846 ORTHO05D038626 5.8e-10 68.9 115 45.2
BraA02t04922Z Brassica rapa HOM05D007846 ORTHO05D010837 7.6e-10 68.6 81 55.6
BcaC03g13197 Brassica carinata HOM05D007846 ORTHO05D010837 1.3e-09 67.8 107 45.8
C02p03180 Brassica napus HOM05D007846 ORTHO05D010837 1.3e-09 67.8 107 45.8
BolC2t06280H Brassica oleracea HOM05D007846 ORTHO05D010837 1.3e-09 67.8 107 45.8
Carub.0006s0658 Capsella rubella HOM05D007846 ORTHO05D010837 2.9e-09 66.6 122 37.7
AL6G17810 Arabidopsis lyrata HOM05D007846 ORTHO05D038626 2.4e-08 63.5 160 36.9
Carub.0006s0653 Capsella rubella HOM05D007846 ORTHO05D000624 4.6e-07 59.3 74 43.2
BcaC06g32424 Brassica carinata HOM05D007846 ORTHO05D021761 1.7e-06 57.4 82 42.7
C09p69670 Brassica napus HOM05D007846 ORTHO05D021761 1.7e-06 57.4 82 42.7
BolC9t59710H Brassica oleracea HOM05D007846 ORTHO05D021761 1.7e-06 57.4 82 42.7
Thhalv10015090m.g Eutrema salsugineum HOM05D007846 ORTHO05D000624 3.9e-06 56.2 75 44.0
A10p29300 Brassica napus HOM05D007846 ORTHO05D021761 6.6e-06 55.5 82 42.7
BraA10t44974Z Brassica rapa HOM05D007846 ORTHO05D021761 6.6e-06 55.5 82 42.7
Carub.0006s0652 Capsella rubella HOM05D007846 ORTHO05D031404 6.6e-06 55.5 81 43.2


User provided reference genes

Program Settings