Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10014504m.g Eutrema salsugineum HOM05D007481 ORTHO05D009444 3.4e-146 521.5 248 100.0
Sp6g40760 Schrenkiella parvula HOM05D007481 ORTHO05D009444 1.4e-131 473.0 248 89.5
AL6G10600 Arabidopsis lyrata HOM05D007481 ORTHO05D009444 1.4e-128 463.0 248 89.5
Carub.0006s0036 Capsella rubella HOM05D007481 ORTHO05D009444 8.8e-126 453.8 248 86.3
CARHR211840 Cardamine hirsuta HOM05D007481 ORTHO05D009444 7.4e-125 450.7 249 87.1
AT5G01470 Arabidopsis thaliana HOM05D007481 ORTHO05D009444 9.1e-123 443.7 248 87.1
BcaB05g21923 Brassica carinata HOM05D007481 ORTHO05D009444 1.4e-118 429.9 249 81.9
Aa31LG1G23100 Aethionema arabicum HOM05D007481 ORTHO05D009444 1.5e-117 426.4 245 82.4
C02p00150 Brassica napus HOM05D007481 ORTHO05D009444 2.2e-116 422.5 245 81.6
BolC2t06012H Brassica oleracea HOM05D007481 ORTHO05D009444 3.1e-115 418.7 245 80.8
BraA02t04685Z Brassica rapa HOM05D007481 ORTHO05D009444 7.0e-115 417.5 245 80.4
BcaC03g13078 Brassica carinata HOM05D007481 ORTHO05D009444 2.9e-113 412.1 245 80.8
THA.LOC104816191 Tarenaya hassleriana HOM05D007481 ORTHO05D009444 1.4e-110 403.3 243 81.1
QL07p035708 Quercus lobata HOM05D007481 ORTHO05D009444 1.9e-104 382.9 244 74.2
CANSAT35G1044 Cannabis sativa HOM05D007481 ORTHO05D009444 1.0e-102 377.1 247 73.3
Thecc.05G016400 Theobroma cacao HOM05D007481 ORTHO05D009444 5.2e-102 374.8 248 73.0
FAN05G5358 Fragaria x ananassa HOM05D007481 ORTHO05D009444 1.2e-101 373.6 246 72.8
COL.COLO4_14539 Corchorus olitorius HOM05D007481 ORTHO05D009444 2.6e-101 372.5 251 72.9
RcHm_v2.0_Chr3g0463171 Rosa chinensis HOM05D007481 ORTHO05D009444 3.4e-101 372.1 246 72.8
CiPaw.10G156500 Carya illinoinensis HOM05D007481 ORTHO05D009444 1.7e-100 369.8 245 72.7
Cfa017210 Carpinus fangiana HOM05D007481 ORTHO05D009444 2.8e-100 369.0 227 74.4
Dinv04699 Davidia involucrata HOM05D007481 ORTHO05D009444 4.8e-100 368.2 248 72.6
Ciclev10012584m.g Citrus clementina HOM05D007481 ORTHO05D009444 1.4e-99 366.7 244 71.7
Nn2g13707 Nelumbo nucifera HOM05D007481 ORTHO05D009444 1.4e-99 366.7 244 70.5
MD04G1152000 Malus domestica HOM05D007481 ORTHO05D009444 5.4e-99 364.8 245 71.8
TWI74G0365 Tripterygium wilfordii HOM05D007481 ORTHO05D009444 9.1e-99 364.0 243 71.6
Manes.09G104600 Manihot esculenta HOM05D007481 ORTHO05D009444 2.0e-98 362.8 244 71.7
Prupe.6G277100 Prunus persica HOM05D007481 ORTHO05D009444 2.7e-98 362.5 243 72.4
GSVIVG01033961001 Vitis vinifera HOM05D007481 ORTHO05D009444 2.7e-98 362.5 245 71.8
Gohir.D09G160700 Gossypium hirsutum HOM05D007481 ORTHO05D009444 3.5e-98 362.1 245 72.2
Potri.006G100100 Populus trichocarpa HOM05D007481 ORTHO05D009444 3.8e-97 358.6 242 70.7
Glyma.03G058200 Glycine max HOM05D007481 ORTHO05D009444 6.6e-97 357.8 241 70.1
FAN02G0465 Fragaria x ananassa HOM05D007481 ORTHO05D009444 1.5e-96 356.7 242 71.1
Lj3g0018029 Lotus japonicus HOM05D007481 ORTHO05D009444 5.5e-96 354.8 240 70.4
Actinidia11588 Actinidia chinensis HOM05D007481 ORTHO05D009444 7.2e-96 354.4 242 71.1
Medtr4g012440 Medicago truncatula HOM05D007481 ORTHO05D009444 7.2e-96 354.4 246 69.9
Gorai.006G182400 Gossypium raimondii HOM05D007481 ORTHO05D009444 8.0e-95 350.9 280 64.3
Psat7g244960 Pisum sativum HOM05D007481 ORTHO05D009444 1.0e-94 350.5 246 68.7
SGA_v2.0_scaffold240G44095 Striga asiatica HOM05D003907 ORTHO05D004819 1.0e-94 350.5 243 70.4
CSS0016102 Camellia sinensis var. sinensis HOM05D007481 ORTHO05D009444 1.4e-94 350.1 247 68.8
Lalb_Chr07g0193571 Lupinus albus HOM05D007481 ORTHO05D009444 1.4e-94 350.1 245 68.6
Cc06_g01380 Coffea canephora HOM05D007481 ORTHO05D009444 1.8e-94 349.7 247 70.0
PGR031G3607 Punica granatum HOM05D007481 ORTHO05D009444 2.3e-94 349.4 246 68.3
Peaxi162Scf00009g01813 Petunia axillaris HOM05D007481 ORTHO05D009444 3.0e-94 349.0 256 66.0
arahy.Tifrunner.gnm1.ann1.7RHW31 Arachis hypogaea HOM05D007481 ORTHO05D009444 4.0e-94 348.6 243 68.7
Migut.L02012 Erythranthe guttata HOM05D007481 ORTHO05D009444 4.0e-94 348.6 246 71.1
Phvul.010G001400 Phaseolus vulgaris HOM05D007481 ORTHO05D009444 5.2e-94 348.2 241 67.6
Sed0020862 Sechium edule HOM05D007481 ORTHO05D009444 6.8e-94 347.8 241 69.3
Eucgr.B02817 Eucalyptus grandis HOM05D007481 ORTHO05D009444 8.9e-94 347.4 247 68.4
PGSC0003DMG400011097 Solanum tuberosum HOM05D007481 ORTHO05D009444 2.0e-93 346.3 248 67.7
Ca_20231_v3 Cicer arietinum L. HOM05D007481 ORTHO05D009444 2.6e-93 345.9 243 67.9
Sabra06G0076900 Salix brachista HOM05D007481 ORTHO05D009444 2.6e-93 345.9 242 69.0
ECA248G3524 Erigeron canadensis HOM05D007481 ORTHO05D009444 3.4e-93 345.5 241 69.3
CAN.G616.2 Capsicum annuum HOM05D007481 ORTHO05D009444 4.4e-93 345.1 256 65.6
Nitab4.5_0003666g0020 Nicotiana tabacum HOM05D007481 ORTHO05D009444 4.4e-93 345.1 243 70.4
ClCG04G007010 Citrullus lanatus HOM05D007481 ORTHO05D009444 7.5e-93 344.4 243 68.3
MSTRG.10219 Avicennia marina HOM05D007481 ORTHO05D009444 9.8e-93 344.0 254 67.7
Sopen10g034630 Solanum pennellii HOM05D007481 ORTHO05D009444 1.3e-92 343.6 256 65.2
CsaV3_4G026270 Cucumis sativus L. HOM05D007481 ORTHO05D009444 2.8e-92 342.4 242 67.4
Solyc10g085160.2 Solanum lycopersicum HOM05D007481 ORTHO05D009444 2.8e-92 342.4 256 64.8
HanXRQChr01g0007111 Helianthus annuus HOM05D007481 ORTHO05D009444 1.1e-91 340.5 242 69.4
TPR.G13336 Trifolium pratense HOM05D007481 ORTHO05D009444 1.4e-91 340.1 251 66.5
FAN14G0098 Fragaria x ananassa HOM05D007481 ORTHO05D009444 3.1e-91 339.0 306 57.8
Nitab4.5_0003024g0060 Nicotiana tabacum HOM05D007481 ORTHO05D009444 4.1e-91 338.6 260 66.9
Aqoxy2G00902 Aquilegia oxysepala HOM05D007481 ORTHO05D009444 7.8e-90 334.3 250 62.4
FAN09G2325 Fragaria x ananassa HOM05D007481 ORTHO05D009444 1.1e-88 330.5 246 66.7
unitig_736.g22787 Utricularia gibba HOM05D007481 ORTHO05D009444 3.3e-88 328.9 240 66.2
Sc07g0006570 Simmondsia chinensis HOM05D007481 ORTHO05D009444 4.3e-88 328.6 244 65.6
Ah.02g115900 Amaranthus hybridus HOM05D003907 ORTHO05D004819 1.6e-87 326.6 258 61.6
arahy.Tifrunner.gnm1.ann1.6XTR6T Arachis hypogaea HOM05D007481 ORTHO05D009444 1.6e-87 326.6 243 65.4
PSO801G0715 Papaver somniferum HOM05D007481 ORTHO05D009444 4.0e-86 322.0 244 61.5
Lj3A953G52 Lonicera japonica HOM05D007481 ORTHO05D009444 1.5e-85 320.1 251 62.9
PSO339G5056 Papaver somniferum HOM05D007481 ORTHO05D009444 7.5e-85 317.8 243 62.1
Duzib093G0021 Durio zibethinus HOM05D007481 ORTHO05D009444 1.4e-83 313.5 205 72.7
ATR0618G339 Amborella trichopoda HOM05D007481 ORTHO05D009444 3.2e-83 312.4 245 60.8
Hund11009 Selenicereus undatus HOM05D007481 ORTHO05D009444 6.6e-81 304.7 268 59.3
SEGI_08492 Sequoiadendron giganteum HOM05D007481 ORTHO05D009444 1.2e-77 293.9 282 53.5
Gohir.A09G165100 Gossypium hirsutum HOM05D007481 ORTHO05D009444 2.6e-77 292.7 185 75.7
vmacro20262 Vaccinium macrocarpon HOM05D007481 ORTHO05D009444 7.5e-77 291.2 246 62.6
FvH4_6g11480 Fragaria vesca HOM05D007481 ORTHO05D009444 9.8e-77 290.8 179 77.1
Lsat_1_v5_gn_5_149561 Lactuca sativa HOM05D007481 ORTHO05D009444 4.9e-76 288.5 241 59.3
Haze_20985 Corylus avellana HOM05D007481 ORTHO05D009444 2.4e-75 286.2 257 58.0
Zm00001eb063270 Zea mays HOM05D007481 ORTHO05D009444 9.2e-75 284.3 251 56.6
Rhsim05G0214800 Rhododendron simsii HOM05D007481 ORTHO05D009444 4.6e-74 282.0 301 49.2
Cpa.g.sc11.154 Carica papaya HOM05D007481 ORTHO05D009444 1.0e-73 280.8 245 61.2
TAR633G1799 Trochodendron aralioides HOM05D007481 ORTHO05D009444 3.9e-73 278.9 244 57.0
Os03g0826700 Oryza sativa ssp. japonica HOM05D007481 ORTHO05D009444 1.5e-72 276.9 248 58.1
Pp3c17_21930 Physcomitrium patens HOM05D007481 ORTHO05D009444 1.5e-72 276.9 269 54.3
MELO3C003292.2 Cucumis melo HOM05D007481 ORTHO05D009444 4.7e-71 271.9 175 72.6
SalBow4G1731 Salvia bowleyana HOM05D007481 ORTHO05D009444 2.3e-70 269.6 183 69.9
Mapoly0103s0024 Marchantia polymorpha HOM05D007481 ORTHO05D009444 4.4e-69 265.4 267 51.7
CDE02G3625 Ceratophyllum demersum HOM05D007481 ORTHO05D009444 1.1e-67 260.8 181 70.2
FAN14G2270 Fragaria x ananassa HOM05D000872 ORTHO05D000777 1.5e-64 250.4 288 50.7
AagrBONN_evm.TU.Sc2ySwM_228.1780 Anthoceros agrestis HOM05D007481 ORTHO05D009444 1.9e-64 250.0 218 56.9
SMO119G0350 Selaginella moellendorffii HOM05D007481 ORTHO05D009444 1.2e-63 247.3 214 55.6
CBR_g4113 Chara braunii HOM05D007481 ORTHO05D009444 1.2e-61 240.7 283 47.7
MBI14_g30737_MAGBIO Magnolia biondii HOM05D007481 ORTHO05D009444 9.2e-59 231.1 250 49.2
DCAR_015418 Daucus carota HOM05D007481 ORTHO05D009444 1.3e-49 200.7 136 72.8
VMungo0331G0457 Vigna mungo HOM05D007481 ORTHO05D009444 4.0e-46 189.1 133 67.7
Atru.chr8.2241 Acer truncatum HOM05D007481 ORTHO05D009444 4.9e-44 182.2 117 73.5
HPP92_003771 Vanilla planifolia HOM05D007481 ORTHO05D009444 1.4e-43 180.6 184 52.7
Oeu006297.1 Olea europaea HOM05D007481 ORTHO05D009444 7.1e-27 125.2 85 70.6
EL10Ac5g12562 Beta vulgaris HOM05D007481 ORTHO05D009444 5.7e-24 115.5 92 60.9
Eucgr.B02818 Eucalyptus grandis HOM05D007481 ORTHO05D009444 3.4e-21 106.3 88 56.8
AUR62030437 Chenopodium quinoa HOM05D007481 ORTHO05D009444 1.9e-11 73.9 36 83.3
AUR62004051 Chenopodium quinoa HOM05D005677 ORTHO05D006966 2.8e-07 60.1 158 27.8
PSO731G0124 Papaver somniferum HOM05D005677 ORTHO05D006966 8.2e-07 58.5 213 26.8
PSO210G3110 Papaver somniferum HOM05D005677 ORTHO05D006966 4.1e-06 56.2 213 26.3
Pp3c26_2100 Physcomitrium patens HOM05D001602 ORTHO05D001470 7.0e-06 55.5 119 26.1
SMO307G0066 Selaginella moellendorffii HOM05D002553 ORTHO05D002767 9.1e-06 55.1 124 27.4


User provided reference genes

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