Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10014478m.g Eutrema salsugineum HOM05D009072 ORTHO05D012584 4.0e-17 92.8 50 100.0
BolC2t06353H Brassica oleracea HOM05D009072 ORTHO05D012584 4.9e-15 85.9 50 92.0
A02p00010 Brassica napus HOM05D000856 ORTHO05D001792 8.4e-15 85.1 50 90.0
BcaC03g13260 Brassica carinata HOM05D009072 ORTHO05D012584 3.2e-14 83.2 50 88.0
BcaB05g21547 Brassica carinata HOM05D009072 ORTHO05D012584 5.4e-14 82.4 50 90.0
Sp6g33820 Schrenkiella parvula HOM05D009072 ORTHO05D012584 5.4e-14 82.4 50 90.0
A10p27800 Brassica napus HOM05D009072 ORTHO05D012584 7.1e-14 82.0 50 88.0
BraA10t44830Z Brassica rapa HOM05D009072 ORTHO05D012584 7.1e-14 82.0 50 88.0
BraA02t04984Z Brassica rapa HOM05D009072 ORTHO05D012584 1.2e-13 81.3 50 88.0
C03p04620 Brassica napus HOM05D000856 ORTHO05D001792 1.6e-13 80.9 50 88.0
BolC3t12993H Brassica oleracea HOM05D000856 ORTHO05D104791 1.6e-13 80.9 50 88.0
A03p04160 Brassica napus HOM05D000856 ORTHO05D001792 2.1e-13 80.5 50 86.0
BraA03t09761Z Brassica rapa HOM05D009072 ORTHO05D012584 2.1e-13 80.5 50 86.0
C09p66290 Brassica napus HOM05D009072 ORTHO05D012584 4.6e-13 79.3 50 86.0
BcaB08g37200 Brassica carinata HOM05D009072 ORTHO05D012584 6.0e-13 79.0 50 86.0
C09p67900 Brassica napus HOM05D009072 ORTHO05D013961 6.0e-13 79.0 50 86.0
BolC9t59550H Brassica oleracea HOM05D009072 ORTHO05D013961 6.0e-13 79.0 50 86.0
AL6G19930 Arabidopsis lyrata HOM05D009072 ORTHO05D012584 3.3e-11 73.2 50 84.0
AT5G09530 Arabidopsis thaliana HOM05D009072 ORTHO05D012584 4.3e-11 72.8 50 84.0
CARHR203860 Cardamine hirsuta HOM05D009072 ORTHO05D012584 9.6e-11 71.6 50 82.0
BcaB01g05572 Brassica carinata HOM05D000856 ORTHO05D001792 8.1e-10 68.6 50 80.0
Carub.0006s0810 Capsella rubella HOM05D009072 ORTHO05D012584 1.8e-09 67.4 50 78.0
Carub.0003s2767 Capsella rubella HOM05D009072 ORTHO05D012584 5.2e-09 65.9 50 76.0
AT5G09520 Arabidopsis thaliana HOM05D009072 ORTHO05D012584 1.4e-06 57.8 47 78.7
AL6G19920 Arabidopsis lyrata HOM05D009072 ORTHO05D012584 3.2e-06 56.6 47 76.6
Carub.0006s0809 Capsella rubella HOM05D009072 ORTHO05D012584 9.3e-06 55.1 47 78.7


User provided reference genes

Program Settings