Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10014409m.g Eutrema salsugineum HOM05D006878 ORTHO05D008579 7.9e-149 530.4 265 100.0
Sp6g29870 Schrenkiella parvula HOM05D006878 ORTHO05D008579 3.1e-137 491.9 265 92.8
SpUn0049_0070 Schrenkiella parvula HOM05D006878 ORTHO05D008579 3.1e-137 491.9 265 92.8
AT5G14140 Arabidopsis thaliana HOM05D006878 ORTHO05D008579 8.5e-135 483.8 265 89.4
AL6G24810 Arabidopsis lyrata HOM05D006878 ORTHO05D008579 2.5e-134 482.3 265 89.4
BcaB01g06341 Brassica carinata HOM05D006878 ORTHO05D008579 5.1e-132 474.6 265 88.7
BcaB01g05305 Brassica carinata HOM05D006878 ORTHO05D008579 3.3e-131 471.9 261 89.7
A03p06460 Brassica napus HOM05D006878 ORTHO05D008579 9.7e-131 470.3 265 89.4
C03p07460 Brassica napus HOM05D006878 ORTHO05D008579 1.5e-128 463.0 266 88.3
BolC3t13247H Brassica oleracea HOM05D006878 ORTHO05D008579 1.5e-128 463.0 266 88.3
Carub.0006s1234 Capsella rubella HOM05D006878 ORTHO05D008579 3.4e-128 461.8 255 89.0
CARHR199200 Cardamine hirsuta HOM05D006878 ORTHO05D008579 6.3e-114 414.5 265 78.9
Aa31LG11G14940 Aethionema arabicum HOM05D006878 ORTHO05D008579 8.2e-114 414.1 256 80.9
THA.LOC104821122 Tarenaya hassleriana HOM05D006878 ORTHO05D008579 6.1e-101 371.3 261 72.0
COL.COLO4_13265 Corchorus olitorius HOM05D006878 ORTHO05D008579 3.3e-94 349.0 254 69.3
Duzib147G1327 Durio zibethinus HOM05D006878 ORTHO05D008579 3.3e-94 349.0 257 68.1
TWI34G0743 Tripterygium wilfordii HOM05D006878 ORTHO05D008579 4.2e-94 348.6 263 69.2
TWI34G1534 Tripterygium wilfordii HOM05D006878 ORTHO05D008579 1.2e-93 347.1 261 69.3
Thecc.04G038000 Theobroma cacao HOM05D006878 ORTHO05D008579 4.7e-93 345.1 251 69.3
Ciclev10016370m.g Citrus clementina HOM05D006878 ORTHO05D008579 1.4e-92 343.6 256 69.5
GSVIVG01033083001 Vitis vinifera HOM05D006878 ORTHO05D008579 2.6e-91 339.3 248 68.5
Atru.chr6.2581 Acer truncatum HOM05D006878 ORTHO05D008579 3.4e-91 339.0 249 69.9
Gohir.A07G228800 Gossypium hirsutum HOM05D006878 ORTHO05D008579 3.4e-91 339.0 246 69.5
Manes.15G161800 Manihot esculenta HOM05D006878 ORTHO05D008579 4.4e-91 338.6 255 66.3
Gohir.D07G235800 Gossypium hirsutum HOM05D006878 ORTHO05D008579 5.7e-91 338.2 246 69.9
Gorai.001G271700 Gossypium raimondii HOM05D006878 ORTHO05D008579 9.8e-91 337.4 246 69.5
PGR142G3785 Punica granatum HOM05D006878 ORTHO05D008579 9.8e-91 337.4 244 66.8
Potri.001G329300 Populus trichocarpa HOM05D006878 ORTHO05D008579 1.7e-90 336.7 253 66.0
Prupe.3G307100 Prunus persica HOM05D006878 ORTHO05D008579 1.7e-90 336.7 247 69.2
CANSAT64G0355 Cannabis sativa HOM05D006878 ORTHO05D008579 2.2e-90 336.3 261 65.5
Rhsim08G0042400 Rhododendron simsii HOM05D006878 ORTHO05D008579 1.1e-89 334.0 247 66.8
DCAR_015107 Daucus carota HOM05D006878 ORTHO05D008579 1.4e-89 333.6 252 67.5
MD09G1010100 Malus domestica HOM05D006878 ORTHO05D008579 1.4e-89 333.6 242 68.2
Dinv33333 Davidia involucrata HOM05D006878 ORTHO05D008579 1.8e-89 333.2 258 65.5
MD17G1000600 Malus domestica HOM05D006878 ORTHO05D008579 2.4e-89 332.8 247 68.4
vmacro18351 Vaccinium macrocarpon HOM05D006878 ORTHO05D008579 5.4e-89 331.6 271 62.7
Cfa007222 Carpinus fangiana HOM05D006878 ORTHO05D008579 9.2e-89 330.9 251 68.1
CsaV3_2G034120 Cucumis sativus L. HOM05D006878 ORTHO05D008579 1.2e-88 330.5 255 65.9
ClCG11G007130 Citrullus lanatus HOM05D006878 ORTHO05D008579 1.6e-88 330.1 254 66.5
Actinidia05902 Actinidia chinensis HOM05D006878 ORTHO05D008579 2.7e-88 329.3 260 64.2
Sed0002550 Sechium edule HOM05D006878 ORTHO05D008579 3.5e-88 328.9 244 68.4
MELO3C008189.2 Cucumis melo HOM05D006878 ORTHO05D008579 1.7e-87 326.6 255 64.7
CSS0033487 Camellia sinensis var. sinensis HOM05D006878 ORTHO05D008579 2.3e-87 326.2 259 62.9
Eucgr.I01641 Eucalyptus grandis HOM05D006878 ORTHO05D008579 2.9e-87 325.9 238 68.9
TAR371G0275 Trochodendron aralioides HOM05D006878 ORTHO05D008579 1.1e-86 323.9 255 64.7
Sabra16G0210700 Salix brachista HOM05D006878 ORTHO05D008579 2.5e-86 322.8 254 64.6
CSS0001354 Camellia sinensis var. sinensis HOM05D006878 ORTHO05D008579 3.3e-86 322.4 246 64.6
TAR629G1038 Trochodendron aralioides HOM05D006878 ORTHO05D008579 4.3e-86 322.0 244 66.4
TAR629G1805 Trochodendron aralioides HOM05D006878 ORTHO05D008579 7.3e-86 321.2 248 65.7
Nitab4.5_0002050g0060 Nicotiana tabacum HOM05D006878 ORTHO05D008579 8.0e-85 317.8 251 61.4
QL02p071231 Quercus lobata HOM05D006878 ORTHO05D008579 1.0e-84 317.4 280 61.4
Aqoxy5G03335 Aquilegia oxysepala HOM05D006878 ORTHO05D008579 2.3e-84 316.2 245 64.9
HanXRQChr14g0450611 Helianthus annuus HOM05D006878 ORTHO05D008579 3.1e-84 315.8 240 66.2
Nitab4.5_0009844g0010 Nicotiana tabacum HOM05D006878 ORTHO05D008579 3.1e-84 315.8 251 60.6
Phvul.001G093000 Phaseolus vulgaris HOM05D006878 ORTHO05D008579 3.1e-84 315.8 260 64.6
Psat3g178400 Pisum sativum HOM05D006878 ORTHO05D008579 3.1e-84 315.8 245 64.9
VMungo1383G2452 Vigna mungo HOM05D006878 ORTHO05D008579 8.9e-84 314.3 260 62.3
TPR.G38297 Trifolium pratense HOM05D006878 ORTHO05D008579 1.2e-83 313.9 245 64.9
Peaxi162Scf00420g00554 Petunia axillaris HOM05D006878 ORTHO05D008579 1.5e-83 313.5 252 61.5
Lalb_Chr14g0363461 Lupinus albus HOM05D006878 ORTHO05D008579 3.4e-83 312.4 248 64.9
Migut.K01467 Erythranthe guttata HOM05D006878 ORTHO05D008579 5.8e-83 311.6 250 62.4
Glyma.16G056000 Glycine max HOM05D006878 ORTHO05D008579 1.7e-82 310.1 251 64.9
Lsat_1_v5_gn_2_93161 Lactuca sativa HOM05D006878 ORTHO05D008579 2.2e-82 309.7 239 66.1
Sc03g0006490 Simmondsia chinensis HOM05D006878 ORTHO05D008579 2.2e-82 309.7 259 62.9
Oeu005107.2 Olea europaea HOM05D006878 ORTHO05D008579 2.9e-82 309.3 288 56.6
CAN.G473.102 Capsicum annuum HOM05D006878 ORTHO05D008579 3.2e-81 305.8 257 59.9
MBI07_g39449_MAGBIO Magnolia biondii HOM05D006878 ORTHO05D008579 7.0e-81 304.7 255 62.4
RcHm_v2.0_Chr2g0175731 Rosa chinensis HOM05D006878 ORTHO05D008579 7.0e-81 304.7 274 58.4
Cc07_g00890 Coffea canephora HOM05D006878 ORTHO05D008579 1.2e-80 303.9 258 60.5
arahy.Tifrunner.gnm1.ann1.1N9EHH Arachis hypogaea HOM05D006878 ORTHO05D008579 2.0e-80 303.1 254 64.2
AUR62003439 Chenopodium quinoa HOM05D006878 ORTHO05D008579 3.5e-80 302.4 245 63.7
AUR62029405 Chenopodium quinoa HOM05D006878 ORTHO05D008579 4.6e-80 302.0 248 62.9
PGSC0003DMG400020210 Solanum tuberosum HOM05D006878 ORTHO05D008579 4.6e-80 302.0 251 60.6
arahy.Tifrunner.gnm1.ann1.G39TQA Arachis hypogaea HOM05D006878 ORTHO05D008579 6.0e-80 301.6 254 63.4
MSTRG.3257 Avicennia marina HOM05D006878 ORTHO05D008579 7.8e-80 301.2 253 61.3
FAN09G4559 Fragaria x ananassa HOM05D006878 ORTHO05D008579 1.0e-79 300.8 274 58.4
PSO478G0882 Papaver somniferum HOM05D006878 ORTHO05D008579 1.0e-79 300.8 260 60.8
SGA_v2.0_scaffold47G17597 Striga asiatica HOM05D006878 ORTHO05D008579 1.3e-79 300.4 254 62.2
Solyc02g094170.3 Solanum lycopersicum HOM05D006878 ORTHO05D008579 1.7e-79 300.1 251 61.0
ECA238G1054 Erigeron canadensis HOM05D006878 ORTHO05D008579 3.9e-79 298.9 272 57.4
ATR0561G206 Amborella trichopoda HOM05D006878 ORTHO05D008579 5.0e-79 298.5 256 59.0
Lj1g0011001 Lotus japonicus HOM05D006878 ORTHO05D008579 6.6e-79 298.1 243 63.8
Nn3g16452 Nelumbo nucifera HOM05D006878 ORTHO05D008579 6.6e-79 298.1 239 63.6
Sopen02g038800 Solanum pennellii HOM05D006878 ORTHO05D008579 8.6e-79 297.7 251 60.6
FvH4_6g53600 Fragaria vesca HOM05D006878 ORTHO05D008579 1.9e-78 296.6 273 56.8
SalBow7G1076 Salvia bowleyana HOM05D006878 ORTHO05D008579 7.3e-78 294.7 259 60.6
CiPaw.04G036900 Carya illinoinensis HOM05D006878 ORTHO05D008579 2.1e-77 293.1 226 67.7
Ah.02g119990 Amaranthus hybridus HOM05D006878 ORTHO05D008579 4.7e-77 292.0 243 62.1
FAN14G5463 Fragaria x ananassa HOM05D006878 ORTHO05D008579 4.7e-77 292.0 273 56.0
PSO017G0833 Papaver somniferum HOM05D006878 ORTHO05D008579 8.9e-76 287.7 256 59.4
SHI03949 Sapria himalayana HOM05D006878 ORTHO05D008579 1.7e-74 283.5 248 57.7
Zm00001eb112900 Zea mays HOM05D006878 ORTHO05D008579 3.5e-72 275.8 276 53.3
CDE05G3687 Ceratophyllum demersum HOM05D000160 ORTHO05D000496 6.0e-72 275.0 222 65.3
Os11g0498400 Oryza sativa ssp. japonica HOM05D006878 ORTHO05D008579 8.6e-71 271.2 277 51.6
EL10Ac6g15414 Beta vulgaris HOM05D006878 ORTHO05D008579 9.5e-70 267.7 255 58.4
Medtr7g029090 Medicago truncatula HOM05D006878 ORTHO05D008579 4.6e-64 248.8 193 65.3
Lalb_Chr22g0360351 Lupinus albus HOM05D006878 ORTHO05D008579 4.0e-60 235.7 191 66.5
Lju41C53T12 Lonicera japonica HOM05D006878 ORTHO05D008579 4.9e-58 228.8 247 52.6
BraA03t09977Z Brassica rapa HOM05D006878 ORTHO05D008579 6.4e-58 228.4 133 88.0
Pp3c4_16130 Physcomitrium patens HOM05D006878 ORTHO05D008579 2.1e-53 213.4 260 45.0
Cpa.g.sc171.9 Carica papaya HOM05D006878 ORTHO05D008579 1.4e-52 210.7 131 74.8
SMO367G0946 Selaginella moellendorffii HOM05D006878 ORTHO05D008579 9.0e-52 208.0 227 48.9
Mapoly0041s0098 Marchantia polymorpha HOM05D006878 ORTHO05D008579 6.4e-50 201.8 273 41.4
Haze_14883 Corylus avellana HOM05D006878 ORTHO05D008579 3.3e-46 189.5 260 45.4
HPP92_022669 Vanilla planifolia HOM05D006878 ORTHO05D008579 9.9e-43 177.9 121 68.6
CBR_g26294 Chara braunii HOM05D006878 ORTHO05D008579 6.4e-42 175.3 180 47.2
Ca_22814_v3 Cicer arietinum L. HOM05D006878 ORTHO05D008579 1.5e-38 164.1 245 44.1
Medtr7g029095 Medicago truncatula HOM05D006878 ORTHO05D008579 6.2e-37 158.7 246 40.2
SEGI_11908 Sequoiadendron giganteum HOM05D006878 ORTHO05D008579 7.9e-32 141.7 121 57.0
FAN02G3703 Fragaria x ananassa HOM05D006878 ORTHO05D008579 1.6e-21 107.5 152 43.4
PRCOL_00001512 Prasinoderma coloniale HOM05D006878 ORTHO05D008579 6.9e-20 102.1 139 37.4
CDE05G3052 Ceratophyllum demersum HOM05D006878 ORTHO05D008579 1.7e-18 97.4 114 49.1
Medtr7g029065 Medicago truncatula HOM05D004216 ORTHO05D004926 1.1e-17 94.7 111 54.1
Actinidia36205 Actinidia chinensis HOM05D006878 ORTHO05D008579 1.7e-10 70.9 46 67.4
FAN23G0458 Fragaria x ananassa HOM05D006878 ORTHO05D008579 2.5e-09 67.0 38 84.2
FAN23G0356 Fragaria x ananassa HOM05D006878 ORTHO05D008579 2.3e-07 60.5 46 58.7
Pp3c4_16200 Physcomitrium patens HOM05D006878 ORTHO05D008579 1.1e-06 58.2 137 34.3


User provided reference genes

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