Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10014396m.g Eutrema salsugineum HOM05D006522 ORTHO05D008183 3.1e-153 545.0 269 100.0
Sp6g33330 Schrenkiella parvula HOM05D006522 ORTHO05D008183 1.8e-137 492.7 269 91.8
Carub.0006s0853 Capsella rubella HOM05D006522 ORTHO05D008183 5.4e-137 491.1 270 90.4
AL6G20520 Arabidopsis lyrata HOM05D006522 ORTHO05D008183 6.6e-135 484.2 266 90.6
BcaC04g19347 Brassica carinata HOM05D006522 ORTHO05D008183 6.8e-132 474.2 263 89.7
BolC9t59510H Brassica oleracea HOM05D006522 ORTHO05D008183 6.8e-132 474.2 263 89.7
C09p67500 Brassica napus HOM05D006522 ORTHO05D008183 8.9e-132 473.8 263 89.4
BraA10t44795Z Brassica rapa HOM05D006522 ORTHO05D008183 1.2e-128 463.4 263 87.1
Aa31LG3G17070 Aethionema arabicum HOM05D006522 ORTHO05D008183 7.8e-128 460.7 263 87.5
BcaB08g37142 Brassica carinata HOM05D006522 ORTHO05D008183 1.7e-127 459.5 251 90.0
THA.LOC104819310 Tarenaya hassleriana HOM05D006522 ORTHO05D008183 6.6e-119 431.0 265 79.6
Gohir.D03G044300 Gossypium hirsutum HOM05D006522 ORTHO05D008183 6.0e-112 407.9 266 75.9
Gohir.A02G132900 Gossypium hirsutum HOM05D006522 ORTHO05D008183 7.8e-112 407.5 266 75.9
Thecc.01G107900 Theobroma cacao HOM05D006522 ORTHO05D008183 7.3e-110 401.0 265 73.6
Duzib187G0580 Durio zibethinus HOM05D006522 ORTHO05D008183 8.1e-109 397.5 265 74.3
Potri.005G080300 Populus trichocarpa HOM05D006522 ORTHO05D008183 2.4e-108 396.0 266 72.9
CARHR203220 Cardamine hirsuta HOM05D006522 ORTHO05D008183 1.5e-107 393.3 209 91.4
CiPaw.04G095200 Carya illinoinensis HOM05D006522 ORTHO05D008183 1.5e-107 393.3 268 74.3
Ciclev10027591m.g Citrus clementina HOM05D006522 ORTHO05D008183 7.6e-107 391.0 279 71.7
TWI53G0226 Tripterygium wilfordii HOM05D006522 ORTHO05D008183 1.3e-106 390.2 264 73.5
MD15G1329600 Malus domestica HOM05D006522 ORTHO05D008183 4.6e-104 381.7 272 71.0
Eucgr.I00376 Eucalyptus grandis HOM05D006522 ORTHO05D008183 1.3e-103 380.2 273 69.6
CANSAT01G1323 Cannabis sativa HOM05D006522 ORTHO05D008183 6.6e-103 377.9 269 70.6
FvH4_1g21690 Fragaria vesca HOM05D006522 ORTHO05D008183 1.5e-102 376.7 255 72.5
Manes.13G077900 Manihot esculenta HOM05D006522 ORTHO05D008183 2.5e-102 375.9 296 65.2
RcHm_v2.0_Chr2g0115571 Rosa chinensis HOM05D006522 ORTHO05D008183 2.5e-102 375.9 266 69.9
CSS0003121 Camellia sinensis var. sinensis HOM05D006522 ORTHO05D008183 9.6e-102 374.0 281 67.6
Sc23g0003650 Simmondsia chinensis HOM05D006522 ORTHO05D008183 2.8e-101 372.5 267 69.3
Sed0017006 Sechium edule HOM05D006522 ORTHO05D008183 1.4e-100 370.2 269 68.8
EL10Ac1g00879 Beta vulgaris HOM05D006522 ORTHO05D008183 1.8e-100 369.8 272 69.5
Gorai.003G045400 Gossypium raimondii HOM05D006522 ORTHO05D008183 4.0e-100 368.6 266 71.4
QL06p050567 Quercus lobata HOM05D006522 ORTHO05D008183 1.5e-99 366.7 315 61.0
Hma1.2p1_0070F.1_g037610 Hydrangea macrophylla HOM05D006522 ORTHO05D008183 2.0e-99 366.3 274 67.9
GSVIVG01022189001 Vitis vinifera HOM05D006522 ORTHO05D008183 7.6e-99 364.4 300 63.7
HanXRQChr14g0446011 Helianthus annuus HOM05D006522 ORTHO05D008183 1.3e-98 363.6 271 67.9
Lj4g0021245 Lotus japonicus HOM05D006522 ORTHO05D008183 8.4e-98 360.9 272 65.8
AUR62013645 Chenopodium quinoa HOM05D006522 ORTHO05D008183 1.4e-97 360.1 272 66.9
Zm00001eb401110 Zea mays HOM05D006522 ORTHO05D008183 4.2e-97 358.6 261 68.2
Medtr8g091510 Medicago truncatula HOM05D006522 ORTHO05D008183 5.4e-97 358.2 271 65.3
Os03g0195200 Oryza sativa ssp. japonica HOM05D006522 ORTHO05D008183 1.2e-96 357.1 269 66.2
Dinv16321 Davidia involucrata HOM05D006522 ORTHO05D008183 1.6e-96 356.7 265 67.9
VMungo0251G3519 Vigna mungo HOM05D006522 ORTHO05D008183 4.6e-96 355.1 274 66.1
Ah.05g174330 Amaranthus hybridus HOM05D006522 ORTHO05D008183 6.0e-96 354.8 268 66.8
ECA238G0371 Erigeron canadensis HOM05D006522 ORTHO05D008183 1.0e-95 354.0 267 66.7
PSO675G0908 Papaver somniferum HOM05D006522 ORTHO05D008183 1.3e-95 353.6 275 67.6
Sopen05g033820 Solanum pennellii HOM05D006522 ORTHO05D008183 2.3e-95 352.8 270 65.9
PGSC0003DMG400023383 Solanum tuberosum HOM05D006522 ORTHO05D008183 2.3e-95 352.8 270 66.3
A10p27440 Brassica napus HOM05D006522 ORTHO05D008183 3.0e-95 352.4 190 90.0
Nitab4.5_0003396g0010 Nicotiana tabacum HOM05D006522 ORTHO05D008183 3.0e-95 352.4 268 66.4
FAN26G1180 Fragaria x ananassa HOM05D006522 ORTHO05D008183 3.9e-95 352.1 318 59.1
Nitab4.5_0001027g0010 Nicotiana tabacum HOM05D006522 ORTHO05D008183 3.9e-95 352.1 269 66.2
Psat7g053400 Pisum sativum HOM05D006522 ORTHO05D008183 5.1e-95 351.7 270 64.1
PSO541G5899 Papaver somniferum HOM05D006522 ORTHO05D008183 8.7e-95 350.9 274 67.5
AT5G10070 Arabidopsis thaliana HOM05D006522 ORTHO05D008183 2.5e-94 349.4 188 90.4
AUR62004203 Chenopodium quinoa HOM05D006522 ORTHO05D008183 2.5e-94 349.4 265 67.2
HPP92_027257 Vanilla planifolia HOM05D006522 ORTHO05D008183 2.5e-94 349.4 275 64.0
Actinidia28878 Actinidia chinensis HOM05D001075 ORTHO05D008183 5.6e-94 348.2 267 65.9
Phvul.002G262800 Phaseolus vulgaris HOM05D006522 ORTHO05D008183 7.4e-94 347.8 272 64.0
CAN.G1550.13 Capsicum annuum HOM05D006522 ORTHO05D008183 1.3e-93 347.1 270 65.6
Rhsim10G0156200 Rhododendron simsii HOM05D006522 ORTHO05D008183 1.3e-93 347.1 349 53.9
Glyma.05G181800 Glycine max HOM05D006522 ORTHO05D008183 3.6e-93 345.5 230 69.6
Glyma.08G139500 Glycine max HOM05D006522 ORTHO05D008183 3.6e-93 345.5 225 70.7
Atru.chr4.281 Acer truncatum HOM05D006522 ORTHO05D008183 8.1e-93 344.4 266 66.9
Cc00_g21690 Coffea canephora HOM05D006522 ORTHO05D008183 8.1e-93 344.4 293 63.1
Ca_17709_v3 Cicer arietinum L. HOM05D006522 ORTHO05D008183 1.8e-92 343.2 272 62.1
Prupe.6G178600 Prunus persica HOM05D006522 ORTHO05D008183 1.2e-91 340.5 220 76.8
MELO3C017578.2 Cucumis melo HOM05D006522 ORTHO05D008183 2.6e-91 339.3 315 58.7
arahy.Tifrunner.gnm1.ann1.8IYW0J Arachis hypogaea HOM05D006522 ORTHO05D008183 3.4e-91 339.0 282 59.2
Lalb_Chr12g0203641 Lupinus albus HOM05D006522 ORTHO05D008183 1.7e-90 336.7 270 61.5
TAR376G0333 Trochodendron aralioides HOM05D006522 ORTHO05D008183 2.2e-90 336.3 279 65.6
PGR004G1063 Punica granatum HOM05D006522 ORTHO05D008183 4.9e-90 335.1 267 65.2
TPR.G2232 Trifolium pratense HOM05D006522 ORTHO05D008183 8.4e-90 334.3 266 65.0
Sabra05G0065900 Salix brachista HOM05D006522 ORTHO05D008183 1.1e-89 334.0 266 64.3
MSTRG.23326 Avicennia marina HOM05D006522 ORTHO05D008183 7.9e-88 327.8 224 70.1
COL.COLO4_11046 Corchorus olitorius HOM05D006522 ORTHO05D008183 1.9e-86 323.2 247 65.6
SGA_v2.0_scaffold2G01317 Striga asiatica HOM05D006522 ORTHO05D008183 4.3e-86 322.0 232 69.0
Migut.H02394 Erythranthe guttata HOM05D006522 ORTHO05D008183 1.6e-85 320.1 249 66.7
ATR0564G484 Amborella trichopoda HOM05D006522 ORTHO05D008183 3.7e-85 318.9 279 58.8
Nn5g28991 Nelumbo nucifera HOM05D006522 ORTHO05D008183 1.5e-83 313.5 271 62.0
FAN19G2878 Fragaria x ananassa HOM05D006522 ORTHO05D008183 5.8e-83 311.6 303 56.1
vmacro12933 Vaccinium macrocarpon HOM05D006522 ORTHO05D008183 5.8e-83 311.6 264 61.0
Hma1.2p1_0070F.1_g037620 Hydrangea macrophylla HOM05D006522 ORTHO05D008183 7.6e-83 311.2 274 60.9
Oeu028389.1 Olea europaea HOM05D006522 ORTHO05D008183 3.9e-79 298.9 186 75.3
AUR62013648 Chenopodium quinoa HOM05D006522 ORTHO05D008183 6.7e-79 298.1 243 62.6
CsaV3_UNG186480 Cucumis sativus L. HOM05D006522 ORTHO05D008183 5.7e-78 295.0 204 70.6
SalBow3G1116 Salvia bowleyana HOM05D006522 ORTHO05D008183 1.1e-76 290.8 251 60.6
arahy.Tifrunner.gnm1.ann1.2EL0K0 Arachis hypogaea HOM05D006522 ORTHO05D008183 1.5e-75 287.0 183 72.7
Aqoxy6G00537 Aquilegia oxysepala HOM05D006522 ORTHO05D008183 2.0e-75 286.6 189 73.0
ECA238G2930 Erigeron canadensis HOM05D006522 ORTHO05D008183 3.8e-74 282.3 189 72.5
Cfa002723 Carpinus fangiana HOM05D006522 ORTHO05D008183 5.0e-74 282.0 190 72.1
Lsat_1_v5_gn_2_67761 Lactuca sativa HOM05D006522 ORTHO05D008183 5.0e-74 282.0 261 60.2
Mapoly0168s0016 Marchantia polymorpha HOM05D006522 ORTHO05D008183 3.2e-73 279.3 265 55.5
Lj2A556G28 Lonicera japonica HOM05D006522 ORTHO05D008183 2.7e-72 276.2 226 63.7
unitig_736.g22572 Utricularia gibba HOM05D006522 ORTHO05D008183 8.2e-69 264.6 247 57.9
BcaB08g37140 Brassica carinata HOM05D006522 ORTHO05D008183 1.5e-67 260.4 136 91.2
Pp3c17_17150 Physcomitrium patens HOM05D006522 ORTHO05D008183 2.6e-67 259.6 270 52.6
Psat7g089320 Pisum sativum HOM05D006522 ORTHO05D008183 2.9e-66 256.1 194 63.4
SMO139G0021 Selaginella moellendorffii HOM05D006522 ORTHO05D008183 2.9e-66 256.1 213 57.3
CBR_g22385 Chara braunii HOM05D006522 ORTHO05D008183 5.7e-62 241.9 259 45.9
ClCG09G014260 Citrullus lanatus HOM05D006522 ORTHO05D008183 3.7e-61 239.2 285 49.5
MCO11G860 Micromonas commoda HOM05D006522 ORTHO05D008183 1.8e-55 220.3 176 54.5
Haze_26963 Corylus avellana HOM05D006522 ORTHO05D008183 5.7e-54 215.3 221 48.0
Cre17.g698950 Chlamydomonas reinhardtii HOM05D006522 ORTHO05D008183 2.4e-52 209.9 231 47.6
PRCOL_00002914 Prasinoderma coloniale HOM05D006522 ORTHO05D008183 2.0e-51 206.8 207 51.2
CDE10G0337 Ceratophyllum demersum HOM05D006522 ORTHO05D008183 8.0e-48 194.9 185 58.9
MD01G1023100 Malus domestica HOM05D006522 ORTHO05D008183 6.3e-45 185.3 137 67.9
Haze_24999 Corylus avellana HOM05D006522 ORTHO05D008183 4.5e-43 179.1 190 54.7
Cfa022135 Carpinus fangiana HOM05D006522 ORTHO05D008183 1.2e-38 164.5 223 37.2
AUR62004200 Chenopodium quinoa HOM05D006522 ORTHO05D008183 3.6e-32 142.9 224 41.1
Eucgr.L02916 Eucalyptus grandis HOM05D006522 ORTHO05D008183 1.8e-28 130.6 106 62.3
SHI11627 Sapria himalayana HOM05D006522 ORTHO05D008183 1.3e-21 107.8 95 53.7
SEGI_11019 Sequoiadendron giganteum HOM05D006522 ORTHO05D008183 6.4e-21 105.5 119 51.3
MD01G1023200 Malus domestica HOM05D006522 ORTHO05D008183 1.2e-19 101.3 59 79.7
SHI11626 Sapria himalayana HOM05D006522 ORTHO05D008183 1.6e-19 100.9 59 74.6
SEGI_36547 Sequoiadendron giganteum HOM05D006522 ORTHO05D008183 7.8e-19 98.6 90 53.3
COL.COLO4_11047 Corchorus olitorius HOM05D006522 ORTHO05D008183 1.1e-17 94.7 99 50.5
AagrBONN_evm.TU.Sc2ySwM_368.3361 Anthoceros agrestis HOM05D006522 ORTHO05D008183 1.2e-14 84.7 92 46.7
Potri.007G087000 Populus trichocarpa HOM05D006522 ORTHO05D008183 6.4e-13 79.0 77 54.5
Aqoxy6G00538 Aquilegia oxysepala HOM05D006522 ORTHO05D008183 1.2e-11 74.7 84 51.2
CDE10G0344 Ceratophyllum demersum HOM05D006522 ORTHO05D008183 1.3e-10 71.2 78 51.3


User provided reference genes

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