Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10014227m.g Eutrema salsugineum HOM05D006179 ORTHO05D008370 1.4e-165 586.3 299 100.0
Sp6g25040 Schrenkiella parvula HOM05D006179 ORTHO05D008370 8.6e-152 540.4 299 93.0
CARHR193590 Cardamine hirsuta HOM05D006179 ORTHO05D008370 9.8e-148 526.9 300 90.7
AT5G19370 Arabidopsis thaliana HOM05D006179 ORTHO05D008370 2.3e-144 515.8 300 88.0
AL6G30860 Arabidopsis lyrata HOM05D006179 ORTHO05D008370 1.4e-141 506.5 300 87.0
BcaB01g04864 Brassica carinata HOM05D006179 ORTHO05D008370 5.8e-140 501.1 302 88.4
A03p09460 Brassica napus HOM05D006179 ORTHO05D008370 3.7e-139 498.4 300 87.3
BraA03t10264Z Brassica rapa HOM05D006179 ORTHO05D008370 3.7e-139 498.4 300 87.3
C03p11040 Brassica napus HOM05D006179 ORTHO05D008370 2.4e-138 495.7 302 87.7
Carub.0006s1771 Capsella rubella HOM05D006179 ORTHO05D008370 2.4e-138 495.7 301 86.0
BolC3t13573H Brassica oleracea HOM05D006179 ORTHO05D008370 1.6e-137 493.0 302 87.4
A02p05510 Brassica napus HOM05D006179 ORTHO05D008370 2.3e-136 489.2 299 84.9
BcaC03g13669 Brassica carinata HOM05D006179 ORTHO05D008370 3.3e-135 485.3 299 84.3
BraA02t05502Z Brassica rapa HOM05D006179 ORTHO05D008370 9.9e-132 473.8 325 77.8
Aa31LG1G8830 Aethionema arabicum HOM05D006179 ORTHO05D008370 2.2e-131 472.6 299 83.3
BNapus_Darmor_BZH_scaffold_38p02550 Brassica napus HOM05D006179 ORTHO05D008370 9.2e-130 467.2 290 83.8
THA.LOC104811194 Tarenaya hassleriana HOM05D006179 ORTHO05D008370 1.3e-107 393.7 311 66.9
BcaB01g05143 Brassica carinata HOM05D006179 ORTHO05D008370 2.5e-95 352.8 177 96.0
COL.COLO4_24491 Corchorus olitorius HOM05D006179 ORTHO05D008370 5.0e-91 338.6 301 60.5
GSVIVG01037292001 Vitis vinifera HOM05D006179 ORTHO05D008370 1.9e-90 336.7 300 61.3
QL01p016926 Quercus lobata HOM05D006179 ORTHO05D008370 2.5e-90 336.3 297 60.9
Cfa009884 Carpinus fangiana HOM05D006179 ORTHO05D008370 1.6e-89 333.6 300 60.3
Prupe.4G263800 Prunus persica HOM05D006179 ORTHO05D008370 4.6e-89 332.0 305 59.0
FvH4_3g27810 Fragaria vesca HOM05D006179 ORTHO05D008370 6.1e-89 331.6 281 63.0
RcHm_v2.0_Chr5g0050451 Rosa chinensis HOM05D006179 ORTHO05D008370 2.3e-88 329.7 288 61.5
Potri.009G069300 Populus trichocarpa HOM05D006179 ORTHO05D008370 3.9e-88 328.9 303 59.1
CSS0020940 Camellia sinensis var. sinensis HOM05D006179 ORTHO05D008370 5.1e-88 328.6 292 60.6
Gohir.A07G121100 Gossypium hirsutum HOM05D006179 ORTHO05D008370 8.8e-88 327.8 230 69.6
Gohir.D07G125300 Gossypium hirsutum HOM05D006179 ORTHO05D008370 8.8e-88 327.8 230 69.6
Lalb_Chr04g0249261 Lupinus albus HOM05D006179 ORTHO05D008370 1.5e-87 327.0 240 66.2
Cpa.g.sc157.57 Carica papaya HOM05D006179 ORTHO05D008370 1.9e-87 326.6 307 59.0
PGR119G2402 Punica granatum HOM05D006179 ORTHO05D008370 1.9e-87 326.6 314 59.2
MD11G1184200 Malus domestica HOM05D006179 ORTHO05D008370 3.3e-87 325.9 308 59.1
Hma1.2p1_0470F.1_g159226 Hydrangea macrophylla HOM05D006179 ORTHO05D008370 4.3e-87 325.5 235 67.7
CANSAT54G1770 Cannabis sativa HOM05D006179 ORTHO05D008370 1.7e-86 323.6 282 59.6
Atru.chr3.2957 Acer truncatum HOM05D006179 ORTHO05D008370 2.2e-86 323.2 292 57.5
PSO384G2846 Papaver somniferum HOM05D006179 ORTHO05D008370 2.2e-86 323.2 230 69.1
Ca_06199_v3 Cicer arietinum L. HOM05D006179 ORTHO05D008370 2.8e-86 322.8 226 69.5
Hund21973 Selenicereus undatus HOM05D006179 ORTHO05D008370 1.4e-85 320.5 227 67.8
FAN25G1664 Fragaria x ananassa HOM05D006179 ORTHO05D008370 2.4e-85 319.7 281 61.2
Glyma.14G035700 Glycine max HOM05D006179 ORTHO05D008370 2.4e-85 319.7 274 60.9
LjContig00564g0004002 Lotus japonicus HOM05D006179 ORTHO05D008370 2.4e-85 319.7 278 60.8
arahy.Tifrunner.gnm1.ann1.66DN5N Arachis hypogaea HOM05D006179 ORTHO05D008370 6.9e-85 318.2 210 70.5
PSO339G0647 Papaver somniferum HOM05D006179 ORTHO05D008370 9.1e-85 317.8 305 59.0
Ah.04g159740 Amaranthus hybridus HOM05D006179 ORTHO05D008370 1.2e-84 317.4 218 69.7
Migut.D00669 Erythranthe guttata HOM05D006179 ORTHO05D008370 1.2e-84 317.4 236 68.6
Solyc12g099800.2 Solanum lycopersicum HOM05D006179 ORTHO05D008370 1.5e-84 317.0 248 62.5
Aqoxy1G00395 Aquilegia oxysepala HOM05D006179 ORTHO05D008370 2.0e-84 316.6 288 58.7
EL10Ac4g10106 Beta vulgaris HOM05D006179 ORTHO05D008370 2.0e-84 316.6 261 62.1
HanXRQChr13g0390131 Helianthus annuus HOM05D006179 ORTHO05D008370 2.6e-84 316.2 299 57.2
Sopen12g034430 Solanum pennellii HOM05D006179 ORTHO05D008370 2.6e-84 316.2 248 62.5
CiPaw.14G111900 Carya illinoinensis HOM05D006179 ORTHO05D008370 3.4e-84 315.8 299 58.9
SalBow6G4024 Salvia bowleyana HOM05D006179 ORTHO05D008370 3.4e-84 315.8 276 62.3
Nitab4.5_0001290g0120 Nicotiana tabacum HOM05D006179 ORTHO05D008370 5.9e-84 315.1 229 66.4
Psat2g020720 Pisum sativum HOM05D006179 ORTHO05D008370 7.7e-84 314.7 264 61.4
Rhsim01G0195300 Rhododendron simsii HOM05D006179 ORTHO05D008370 7.7e-84 314.7 322 55.0
PGSC0003DMG401004716 Solanum tuberosum HOM05D006179 ORTHO05D008370 1.0e-83 314.3 225 67.6
Nn2g14782 Nelumbo nucifera HOM05D006179 ORTHO05D008370 1.3e-83 313.9 232 67.7
TPR.G16411 Trifolium pratense HOM05D006179 ORTHO05D008370 1.3e-83 313.9 241 64.7
VMungo0647G1137 Vigna mungo HOM05D006179 ORTHO05D008370 1.7e-83 313.5 281 60.5
Glyma.02G279000 Glycine max HOM05D006179 ORTHO05D008370 2.2e-83 313.2 281 58.7
arahy.Tifrunner.gnm1.ann1.0RM1GA Arachis hypogaea HOM05D006179 ORTHO05D008370 2.9e-83 312.8 216 69.0
Sc16g0011000 Simmondsia chinensis HOM05D006179 ORTHO05D008370 3.8e-83 312.4 222 69.4
TWI31G1173 Tripterygium wilfordii HOM05D006179 ORTHO05D008370 3.8e-83 312.4 298 57.4
TAR623G0610 Trochodendron aralioides HOM05D006179 ORTHO05D008370 5.0e-83 312.0 305 55.1
Phvul.008G201800 Phaseolus vulgaris HOM05D006179 ORTHO05D008370 6.5e-83 311.6 261 62.8
Cc00_g17410 Coffea canephora HOM05D006179 ORTHO05D008370 1.4e-82 310.5 237 65.4
Medtr5g089330 Medicago truncatula HOM05D006179 ORTHO05D008370 1.4e-82 310.5 311 57.2
Gorai.001G135100 Gossypium raimondii HOM05D006179 ORTHO05D008370 1.9e-82 310.1 221 68.8
Sed0005347 Sechium edule HOM05D006179 ORTHO05D008370 1.9e-82 310.1 288 57.3
unitig_62.g23875 Utricularia gibba HOM05D006179 ORTHO05D008370 2.5e-82 309.7 224 68.3
SGA_v2.0_scaffold8G04541 Striga asiatica HOM05D006179 ORTHO05D008370 3.2e-82 309.3 305 56.1
Thecc.09G246900 Theobroma cacao HOM05D006179 ORTHO05D008370 3.2e-82 309.3 354 51.4
AUR62000204 Chenopodium quinoa HOM05D006179 ORTHO05D008370 5.5e-82 308.5 225 67.1
Oeu061700.1 Olea europaea HOM05D006179 ORTHO05D008370 9.4e-82 307.8 225 68.0
Duzib170G0239 Durio zibethinus HOM05D006179 ORTHO05D008370 1.2e-81 307.4 286 59.8
ClCG02G022800 Citrullus lanatus HOM05D006179 ORTHO05D008370 2.1e-81 306.6 299 56.9
TWI79G0794 Tripterygium wilfordii HOM05D006179 ORTHO05D008370 4.7e-81 305.4 301 57.8
CAN.G1305.17 Capsicum annuum HOM05D006179 ORTHO05D008370 6.1e-81 305.1 235 65.1
FAN21G1036 Fragaria x ananassa HOM05D006179 ORTHO05D008370 1.0e-80 304.3 298 57.7
Lj2C622G16 Lonicera japonica HOM05D006179 ORTHO05D008370 2.3e-80 303.1 265 60.0
vmacro14276 Vaccinium macrocarpon HOM05D006179 ORTHO05D008370 3.9e-80 302.4 299 56.9
CDE02G1620 Ceratophyllum demersum HOM05D006179 ORTHO05D008370 5.1e-80 302.0 270 58.9
AUR62006552 Chenopodium quinoa HOM05D006179 ORTHO05D008370 1.1e-79 300.8 234 64.1
ATR0621G006 Amborella trichopoda HOM05D006179 ORTHO05D008370 1.5e-79 300.4 230 65.2
Os07g0687500 Oryza sativa ssp. japonica HOM05D006179 ORTHO05D008370 2.6e-79 299.7 296 57.4
Nn7g36750 Nelumbo nucifera HOM05D006179 ORTHO05D008370 7.4e-79 298.1 228 64.5
Zm00001eb331180 Zea mays HOM05D006179 ORTHO05D008370 1.3e-78 297.4 282 57.4
Haze_23248 Corylus avellana HOM05D006179 ORTHO05D008370 1.7e-78 297.0 393 46.8
DCAR_024400 Daucus carota HOM05D006179 ORTHO05D008370 2.2e-78 296.6 224 65.6
FAN11G2659 Fragaria x ananassa HOM05D000059 ORTHO05D008370 3.1e-77 292.7 254 62.2
TPR.G16393 Trifolium pratense HOM05D006179 ORTHO05D008370 4.1e-77 292.4 281 55.9
Peaxi162Scf00272g00828 Petunia axillaris HOM05D006179 ORTHO05D008370 2.0e-76 290.0 258 57.0
Sabra09G0052200 Salix brachista HOM05D006179 ORTHO05D008370 2.6e-76 289.7 341 49.9
Atru.chr3.2952 Acer truncatum HOM05D006179 ORTHO05D008370 3.8e-75 285.8 262 59.9
Lsat_1_v5_gn_5_65341 Lactuca sativa HOM05D006179 ORTHO05D008370 1.1e-71 274.2 277 54.5
HPP92_028459 Vanilla planifolia HOM05D006179 ORTHO05D008370 1.5e-71 273.9 182 71.4
Pp3c3_13280 Physcomitrium patens HOM05D006179 ORTHO05D008370 2.6e-71 273.1 230 60.0
Mapoly0003s0043 Marchantia polymorpha HOM05D006179 ORTHO05D008370 1.4e-69 267.3 304 50.3
SMO145G0007 Selaginella moellendorffii HOM05D006179 ORTHO05D008370 1.2e-68 264.2 221 60.6
Nitab4.5_0002310g0120 Nicotiana tabacum HOM05D006179 ORTHO05D008370 1.5e-66 257.3 219 60.3
MELO3C014557.2 Cucumis melo HOM05D006179 ORTHO05D008370 6.1e-65 251.9 265 52.1
AagrBONN_evm.TU.Sc2ySwM_117.3174 Anthoceros agrestis HOM05D006179 ORTHO05D008370 5.7e-63 245.4 241 54.4
CBR_g54969 Chara braunii HOM05D006179 ORTHO05D008370 2.2e-62 243.4 219 58.9
CsaV3_6G038930 Cucumis sativus L. HOM05D006179 ORTHO05D008370 6.3e-62 241.9 244 55.3
Eucgr.J00687 Eucalyptus grandis HOM05D006179 ORTHO05D008370 6.5e-59 231.9 151 71.5
Ciclev10017644m.g Citrus clementina HOM05D006179 ORTHO05D008370 1.2e-57 227.6 151 70.2
ECA233G4787 Erigeron canadensis HOM05D006179 ORTHO05D008370 3.8e-51 206.1 143 69.2
SEGI_16296 Sequoiadendron giganteum HOM05D006179 ORTHO05D008370 3.3e-50 203.0 153 63.4
Dinv36157 Davidia involucrata HOM05D006179 ORTHO05D008370 2.8e-49 199.9 216 57.4
Manes.02G138400 Manihot esculenta HOM05D006179 ORTHO05D008370 1.2e-47 194.5 223 56.5
Hund21974 Selenicereus undatus HOM05D006179 ORTHO05D008240 3.4e-47 193.0 158 64.6
Peaxi162Scf00174g00223 Petunia axillaris HOM05D006179 ORTHO05D008370 6.3e-46 188.7 150 62.0
AUR62040469 Chenopodium quinoa HOM05D006179 ORTHO05D008370 7.8e-44 181.8 145 64.1
AUR62037598 Chenopodium quinoa HOM05D006179 ORTHO05D007344 2.9e-38 163.3 141 63.1
Cre07.g350400 Chlamydomonas reinhardtii HOM05D006179 ORTHO05D008370 9.5e-34 148.3 181 40.3
AUR62042212 Chenopodium quinoa HOM05D006179 ORTHO05D008370 3.1e-32 143.3 146 52.7
MCO13G336 Micromonas commoda HOM05D006179 ORTHO05D008370 3.7e-30 136.3 198 37.9
SalBow6G2129 Salvia bowleyana HOM05D006179 ORTHO05D353266 2.5e-26 123.6 154 50.6
CSS0040024 Camellia sinensis var. sinensis HOM05D006179 ORTHO05D008370 2.5e-18 97.1 68 69.1
CSS0040434 Camellia sinensis var. sinensis HOM05D006179 ORTHO05D008370 1.4e-13 81.3 136 36.0
QL02p019212 Quercus lobata HOM05D006179 ORTHO05D008370 1.6e-09 67.8 39 69.2
MD11G1211400 Malus domestica HOM05D004980 ORTHO05D006505 2.8e-09 67.0 126 31.0
Dinv40789 Davidia involucrata HOM05D004980 ORTHO05D006505 3.6e-09 66.6 101 33.7
MCO16G521 Micromonas commoda HOM05D005637 ORTHO05D006983 6.2e-09 65.9 102 41.2
CSS0002819 Camellia sinensis var. sinensis HOM05D004980 ORTHO05D006505 1.1e-08 65.1 100 33.0
arahy.Tifrunner.gnm1.ann1.C5REQA Arachis hypogaea HOM05D004980 ORTHO05D006505 3.1e-08 63.5 100 32.0
CANSAT11G1616 Cannabis sativa HOM05D004980 ORTHO05D006505 4.0e-08 63.2 119 32.8
Eucgr.F00711 Eucalyptus grandis HOM05D004980 ORTHO05D006505 5.3e-08 62.8 95 34.7
LjContig00272g0012473 Lotus japonicus HOM05D004980 ORTHO05D006505 5.3e-08 62.8 114 31.6
Haze_26617 Corylus avellana HOM05D006179 ORTHO05D164269 6.9e-08 62.4 147 34.0
SHI26580 Sapria himalayana HOM05D004980 ORTHO05D006505 6.9e-08 62.4 126 30.2
Psat2g012600 Pisum sativum HOM05D004980 ORTHO05D006505 9.0e-08 62.0 95 31.6
Manes.03G132700 Manihot esculenta HOM05D004980 ORTHO05D006505 1.2e-07 61.6 101 31.7
Potri.001G355800 Populus trichocarpa HOM05D004980 ORTHO05D006505 1.2e-07 61.6 118 33.9
Sabra16G0233900 Salix brachista HOM05D004980 ORTHO05D006505 1.2e-07 61.6 105 33.3
Ca_06343_v3 Cicer arietinum L. HOM05D004980 ORTHO05D006505 1.5e-07 61.2 102 30.4
Cpa.g.sc12.256 Carica papaya HOM05D004980 ORTHO05D006505 2.0e-07 60.8 101 31.7
arahy.Tifrunner.gnm1.ann1.45FXM1 Arachis hypogaea HOM05D004980 ORTHO05D006505 2.6e-07 60.5 101 30.7
FAN16G1125 Fragaria x ananassa HOM05D004980 ORTHO05D006505 2.6e-07 60.5 101 33.7
PSO675G8833 Papaver somniferum HOM05D004980 ORTHO05D006505 2.6e-07 60.5 101 31.7
FvH4_3g23360 Fragaria vesca HOM05D004980 ORTHO05D006505 5.8e-07 59.3 97 33.0
FAN11G2764 Fragaria x ananassa HOM05D004980 ORTHO05D006505 5.8e-07 59.3 97 33.0
FAN21G0499 Fragaria x ananassa HOM05D004980 ORTHO05D006505 5.8e-07 59.3 97 33.0
FAN25G0097 Fragaria x ananassa HOM05D004980 ORTHO05D006505 5.8e-07 59.3 97 33.0
RcHm_v2.0_Chr5g0041141 Rosa chinensis HOM05D004980 ORTHO05D006505 5.8e-07 59.3 97 33.0
AT5G55130 Arabidopsis thaliana HOM05D004980 ORTHO05D006505 9.9e-07 58.5 106 33.0
Sed0026676 Sechium edule HOM05D004980 ORTHO05D006505 9.9e-07 58.5 133 26.3
AL8G30640 Arabidopsis lyrata HOM05D004980 ORTHO05D006505 1.3e-06 58.2 106 29.2
BcaB08g35877 Brassica carinata HOM05D004980 ORTHO05D006505 1.3e-06 58.2 106 30.2
Peaxi162Scf00235g00521 Petunia axillaris HOM05D004980 ORTHO05D006505 1.3e-06 58.2 101 32.7
Carub.0008s1543 Capsella rubella HOM05D004980 ORTHO05D006505 1.7e-06 57.8 102 30.4
Nn3g21061 Nelumbo nucifera HOM05D004980 ORTHO05D006505 1.7e-06 57.8 101 30.7
PGSC0003DMG400022209 Solanum tuberosum HOM05D004980 ORTHO05D006505 1.7e-06 57.8 98 31.6
THA.LOC104817676 Tarenaya hassleriana HOM05D004980 ORTHO05D006505 1.7e-06 57.8 101 31.7
Sp6g17070 Schrenkiella parvula HOM05D004980 ORTHO05D006505 2.2e-06 57.4 119 27.7
PGSC0003DMG400028768 Solanum tuberosum HOM05D004980 ORTHO05D006505 2.2e-06 57.4 98 31.6
DCAR_016653 Daucus carota HOM05D004980 ORTHO05D006505 2.9e-06 57.0 121 28.1
HanXRQChr05g0159781 Helianthus annuus HOM05D004980 ORTHO05D006505 2.9e-06 57.0 101 29.7
Solyc07g064850.3 Solanum lycopersicum HOM05D004980 ORTHO05D006505 2.9e-06 57.0 98 31.6
Sopen07g033050 Solanum pennellii HOM05D004980 ORTHO05D006505 2.9e-06 57.0 98 31.6
vmacro22325 Vaccinium macrocarpon HOM05D004980 ORTHO05D006505 2.9e-06 57.0 99 29.3
ClCG10G005220 Citrullus lanatus HOM05D004980 ORTHO05D006505 3.8e-06 56.6 127 26.8
Sc16g0005820 Simmondsia chinensis HOM05D004980 ORTHO05D006505 3.8e-06 56.6 98 29.6
CARHR268470 Cardamine hirsuta HOM05D004980 ORTHO05D006505 4.9e-06 56.2 102 29.4
PGR083G1712 Punica granatum HOM05D004980 ORTHO05D006505 4.9e-06 56.2 97 32.0
Rhsim06G0222400 Rhododendron simsii HOM05D004980 ORTHO05D006505 4.9e-06 56.2 109 29.4
Cc08_g05680 Coffea canephora HOM05D004980 ORTHO05D006505 6.4e-06 55.8 120 29.2
CsaV3_3G004900 Cucumis sativus L. HOM05D004980 ORTHO05D006505 6.4e-06 55.8 123 26.0
C09p45860 Brassica napus HOM05D004980 ORTHO05D006505 8.4e-06 55.5 134 25.4
AUR62020381 Chenopodium quinoa HOM05D004980 ORTHO05D006505 8.4e-06 55.5 98 28.6
MELO3C014186.2 Cucumis melo HOM05D004980 ORTHO05D006505 8.4e-06 55.5 109 26.6


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