Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10014111m.g Eutrema salsugineum HOM05D006939 ORTHO05D008616 7.8e-183 643.7 324 100.0
Sp6g32750 Schrenkiella parvula HOM05D006939 ORTHO05D008616 1.9e-149 532.7 320 83.8
C03p05420 Brassica napus HOM05D006939 ORTHO05D008616 7.1e-144 514.2 320 82.8
A03p04710 Brassica napus HOM05D006939 ORTHO05D008616 9.3e-144 513.8 320 82.5
BcaB01g05506 Brassica carinata HOM05D006939 ORTHO05D008616 6.0e-143 511.1 320 82.5
BraA03t09811Z Brassica rapa HOM05D006939 ORTHO05D008616 1.8e-142 509.6 320 82.2
BcaB01g06272 Brassica carinata HOM05D006939 ORTHO05D008616 5.1e-142 508.1 320 81.9
CARHR202610 Cardamine hirsuta HOM05D006939 ORTHO05D008616 1.9e-136 489.6 310 79.7
AL6G21250 Arabidopsis lyrata HOM05D006939 ORTHO05D008616 5.5e-136 488.0 326 77.9
AT5G10710 Arabidopsis thaliana HOM05D006939 ORTHO05D008616 1.1e-133 480.3 325 76.0
BolC3t13053H Brassica oleracea HOM05D006939 ORTHO05D008616 7.4e-133 477.6 302 81.8
Carub.0006s0918 Capsella rubella HOM05D006939 ORTHO05D008616 7.4e-133 477.6 320 76.9
THA.LOC104814976 Tarenaya hassleriana HOM05D006939 ORTHO05D008616 1.1e-131 473.8 326 74.2
Aa31LG3G16420 Aethionema arabicum HOM05D006939 ORTHO05D008616 5.3e-131 471.5 328 73.5
Gohir.A05G064600 Gossypium hirsutum HOM05D006939 ORTHO05D008616 6.5e-113 411.4 324 67.0
Gorai.009G068000 Gossypium raimondii HOM05D006939 ORTHO05D008616 1.2e-111 407.1 322 66.1
CSS0002269 Camellia sinensis var. sinensis HOM05D006939 ORTHO05D008616 1.6e-111 406.8 334 64.1
Dinv25196 Davidia involucrata HOM05D006939 ORTHO05D008616 2.7e-111 406.0 330 64.5
Gohir.D05G067200 Gossypium hirsutum HOM05D006939 ORTHO05D008616 2.7e-111 406.0 322 65.8
Thecc.09G006900 Theobroma cacao HOM05D006939 ORTHO05D008616 4.7e-111 405.2 322 66.1
QL12p025112 Quercus lobata HOM05D006939 ORTHO05D008616 3.0e-110 402.5 328 64.6
Lj8C13T0 Lonicera japonica HOM05D006939 ORTHO05D008616 1.5e-109 400.2 324 65.7
Manes.03G003600 Manihot esculenta HOM05D006939 ORTHO05D008616 2.6e-109 399.4 324 66.0
TAR369G0747 Trochodendron aralioides HOM05D006939 ORTHO05D008616 3.4e-109 399.1 330 63.0
Duzib168G0459 Durio zibethinus HOM05D006939 ORTHO05D008616 9.7e-109 397.5 331 64.0
Glyma.04G075200 Glycine max HOM05D006939 ORTHO05D008616 8.3e-108 394.4 327 62.7
CiPaw.07G213000 Carya illinoinensis HOM05D006939 ORTHO05D008616 4.1e-107 392.1 318 65.4
Atru.chr7.2637 Acer truncatum HOM05D006939 ORTHO05D008616 5.3e-107 391.7 325 64.0
GSVIVG01035522001 Vitis vinifera HOM05D006939 ORTHO05D008616 1.2e-106 390.6 325 63.4
CsaV3_2G031410 Cucumis sativus L. HOM05D006939 ORTHO05D008616 3.5e-106 389.0 317 64.7
VMungo1309G0618 Vigna mungo HOM05D006939 ORTHO05D008616 3.5e-106 389.0 328 61.9
Nn8g40552 Nelumbo nucifera HOM05D006939 ORTHO05D008616 7.7e-106 387.9 323 62.8
TWI63G0558 Tripterygium wilfordii HOM05D006939 ORTHO05D008616 1.0e-105 387.5 316 64.6
MELO3C011191.2 Cucumis melo HOM05D006939 ORTHO05D008616 1.7e-105 386.7 317 64.4
arahy.Tifrunner.gnm1.ann1.WZEV1S Arachis hypogaea HOM05D006939 ORTHO05D008616 2.9e-105 386.0 319 63.3
Ca_15668_v3 Cicer arietinum L. HOM05D006939 ORTHO05D008616 2.9e-105 386.0 323 62.8
Glyma.06G076400 Glycine max HOM05D006939 ORTHO05D008616 2.9e-105 386.0 326 62.3
Lalb_Chr08g0243571 Lupinus albus HOM05D006939 ORTHO05D008616 1.1e-104 384.0 315 66.3
Medtr3g108805 Medicago truncatula HOM05D006939 ORTHO05D008616 1.1e-104 384.0 321 64.5
arahy.Tifrunner.gnm1.ann1.8I4SMW Arachis hypogaea HOM05D006939 ORTHO05D008616 1.5e-104 383.6 319 63.3
PGSC0003DMG400001838 Solanum tuberosum HOM05D006939 ORTHO05D008616 1.9e-104 383.3 330 62.4
Lj1g0013260 Lotus japonicus HOM05D006939 ORTHO05D008616 5.5e-104 381.7 323 61.6
Ciclev10008814m.g Citrus clementina HOM05D006939 ORTHO05D008616 7.2e-104 381.3 319 63.6
PGR044G1028 Punica granatum HOM05D006939 ORTHO05D008616 1.6e-103 380.2 327 61.8
Sc09g0010200 Simmondsia chinensis HOM05D006939 ORTHO05D008616 2.7e-103 379.4 309 65.4
Eucgr.C04007 Eucalyptus grandis HOM05D006939 ORTHO05D008616 4.7e-103 378.6 332 60.5
SalBow7G0985 Salvia bowleyana HOM05D006939 ORTHO05D008616 1.0e-102 377.5 332 61.4
Migut.M00074 Erythranthe guttata HOM05D006939 ORTHO05D008616 1.8e-102 376.7 329 60.8
Sed0018205 Sechium edule HOM05D006939 ORTHO05D008616 8.8e-102 374.4 328 62.5
TPR.G12361 Trifolium pratense HOM05D006939 ORTHO05D008616 2.0e-101 373.2 312 62.5
AUR62009066 Chenopodium quinoa HOM05D006939 ORTHO05D008616 9.8e-101 370.9 323 61.0
Sopen08g026100 Solanum pennellii HOM05D006939 ORTHO05D008616 9.8e-101 370.9 330 60.6
Solyc08g077520.3 Solanum lycopersicum HOM05D006939 ORTHO05D008616 1.7e-100 370.2 330 60.6
CAN.G1445.9 Capsicum annuum HOM05D006939 ORTHO05D008616 2.2e-100 369.8 323 62.2
Cc02_g39540 Coffea canephora HOM05D006939 ORTHO05D008616 4.8e-100 368.6 318 61.9
MBI16_g38081_MAGBIO Magnolia biondii HOM05D006939 ORTHO05D008616 4.8e-100 368.6 323 60.7
Sabra18G0011600 Salix brachista HOM05D006939 ORTHO05D008616 4.8e-100 368.6 316 61.7
Sabra18G0014100 Salix brachista HOM05D006939 ORTHO05D008616 4.8e-100 368.6 316 61.7
Potri.018G005900 Populus trichocarpa HOM05D006939 ORTHO05D008616 1.1e-99 367.5 327 61.2
HPP92_017403 Vanilla planifolia HOM05D006939 ORTHO05D008616 4.1e-99 365.5 328 59.1
HanXRQChr12g0379171 Helianthus annuus HOM05D006939 ORTHO05D008616 9.1e-99 364.4 330 60.3
CANSAT25G1759 Cannabis sativa HOM05D006939 ORTHO05D008616 2.0e-98 363.2 335 59.1
CDE02G0224 Ceratophyllum demersum HOM05D006939 ORTHO05D008616 2.7e-98 362.8 312 59.3
Aqoxy7G02987 Aquilegia oxysepala HOM05D006939 ORTHO05D008616 5.9e-98 361.7 325 59.1
Actinidia06924 Actinidia chinensis HOM05D006939 ORTHO05D008616 2.3e-97 359.8 326 61.3
EL10Ac2g03752 Beta vulgaris HOM05D006939 ORTHO05D008616 8.6e-97 357.8 322 58.4
PSO063G0559 Papaver somniferum HOM05D006939 ORTHO05D008616 1.5e-96 357.1 308 59.4
PSO170G5391 Papaver somniferum HOM05D006939 ORTHO05D008616 3.3e-96 355.9 308 59.1
ECA240G2907 Erigeron canadensis HOM05D006939 ORTHO05D008616 7.2e-96 354.8 319 60.2
Prupe.1G460400 Prunus persica HOM05D006939 ORTHO05D008616 7.2e-96 354.8 319 58.6
Hund19405 Selenicereus undatus HOM05D006939 ORTHO05D008616 1.6e-95 353.6 302 61.9
Psat5g025040 Pisum sativum HOM05D006939 ORTHO05D008616 3.6e-95 352.4 307 61.9
AUR62020602 Chenopodium quinoa HOM05D006939 ORTHO05D008616 6.1e-95 351.7 306 61.8
Peaxi162Scf00084g00007 Petunia axillaris HOM05D006939 ORTHO05D008616 5.2e-94 348.6 297 63.3
ClCG08G012690 Citrullus lanatus HOM05D006939 ORTHO05D008616 1.4e-91 340.5 317 59.9
MSTRG.14901 Avicennia marina HOM05D006939 ORTHO05D008616 3.2e-91 339.3 327 56.3
Oeu040447.1 Olea europaea HOM05D006939 ORTHO05D008616 4.1e-91 339.0 285 62.8
RcHm_v2.0_Chr6g0304951 Rosa chinensis HOM05D006939 ORTHO05D008616 4.1e-91 339.0 316 57.9
MD15G1108100 Malus domestica HOM05D006939 ORTHO05D008616 1.2e-90 337.4 318 57.2
vmacro04127 Vaccinium macrocarpon HOM05D006939 ORTHO05D008616 4.5e-90 335.5 272 66.2
FvH4_2g36790 Fragaria vesca HOM05D006939 ORTHO05D008616 7.8e-90 334.7 316 57.6
Lj8C69T1 Lonicera japonica HOM05D006939 ORTHO05D008616 1.3e-89 334.0 324 58.6
unitig_61.g26486 Utricularia gibba HOM05D006939 ORTHO05D008616 1.7e-89 333.6 310 56.8
DCAR_015445 Daucus carota HOM05D006939 ORTHO05D008616 1.9e-88 330.1 329 53.8
CiPaw.08G019500 Carya illinoinensis HOM05D006939 ORTHO05D008616 4.3e-88 328.9 329 56.8
FAN27G1343 Fragaria x ananassa HOM05D006939 ORTHO05D008616 2.1e-87 326.6 316 57.0
Zm00001eb048210 Zea mays HOM05D006939 ORTHO05D008616 2.8e-87 326.2 338 51.8
Rhsim13G0217600 Rhododendron simsii HOM05D006939 ORTHO05D008616 3.6e-87 325.9 416 47.6
DCAR_026761 Daucus carota HOM05D006939 ORTHO05D008616 6.8e-86 321.6 329 52.3
ATR0580G399 Amborella trichopoda HOM05D006939 ORTHO05D008616 1.2e-85 320.9 317 54.6
FAN20G0593 Fragaria x ananassa HOM05D006939 ORTHO05D008616 1.2e-85 320.9 316 56.3
SGA_v2.0_scaffold73G24476 Striga asiatica HOM05D006939 ORTHO05D008616 2.6e-85 319.7 326 56.1
Cfa013266 Carpinus fangiana HOM05D006939 ORTHO05D008616 2.0e-82 310.1 250 66.4
Nitab4.5_0006135g0050 Nicotiana tabacum HOM05D006939 ORTHO05D008616 3.9e-81 305.8 287 59.6
Haze_21731 Corylus avellana HOM05D006939 ORTHO05D008616 5.0e-81 305.4 221 69.7
EL10Ac5g10928 Beta vulgaris HOM05D006939 ORTHO05D008616 6.6e-81 305.1 249 61.4
FAN15G1628 Fragaria x ananassa HOM05D006939 ORTHO05D008616 2.1e-79 300.1 316 53.2
SGA_v2.0_scaffold49G18392 Striga asiatica HOM05D002257 ORTHO05D008616 6.2e-79 298.5 318 53.8
Nitab4.5_0001255g0030 Nicotiana tabacum HOM05D006939 ORTHO05D008616 8.0e-79 298.1 274 59.5
Lsat_1_v5_gn_5_46220 Lactuca sativa HOM05D006939 ORTHO05D008616 1.9e-67 260.4 328 47.9
BcaB01g06274 Brassica carinata HOM05D006939 ORTHO05D008616 1.6e-66 257.3 227 60.8
Phvul.009G101000 Phaseolus vulgaris HOM05D006939 ORTHO05D008616 8.4e-60 235.0 198 62.1
SHI21120 Sapria himalayana HOM05D006939 ORTHO05D008616 3.2e-51 206.5 239 51.0
Mapoly0042s0046 Marchantia polymorpha HOM05D006939 ORTHO05D008616 3.3e-40 169.9 206 46.1
AagrBONN_evm.TU.Sc2ySwM_344.1051 Anthoceros agrestis HOM05D006939 ORTHO05D008616 1.6e-39 167.5 306 37.3
AagrBONN_evm.TU.Sc2ySwM_228.595 Anthoceros agrestis HOM05D006939 ORTHO05D008616 8.1e-39 165.2 298 37.9
SMO119G0385 Selaginella moellendorffii HOM05D006939 ORTHO05D008616 1.3e-36 157.9 298 34.6
MD08G1128700 Malus domestica HOM05D006939 ORTHO05D008616 8.4e-36 155.2 195 46.2
Pp3c6_9310 Physcomitrium patens HOM05D006939 ORTHO05D008616 6.0e-34 149.1 303 34.0
Aqoxy3G02235 Aquilegia oxysepala HOM05D006939 ORTHO05D008616 6.7e-33 145.6 136 54.4
Pp3c5_16590 Physcomitrium patens HOM05D006939 ORTHO05D008616 5.7e-32 142.5 201 37.8
Aqoxy1G02501 Aquilegia oxysepala HOM05D006939 ORTHO05D008616 9.6e-32 141.7 250 39.6
COL.COLO4_19037 Corchorus olitorius HOM05D000039 ORTHO05D000870 5.5e-19 99.4 250 32.4
MBI16_g27300_MAGBIO Magnolia biondii HOM05D006939 ORTHO05D008616 5.1e-17 92.8 182 34.6
Os04g0284100 Oryza sativa ssp. japonica HOM05D006939 ORTHO05D008616 3.6e-10 70.1 54 59.3
CDE05G2180 Ceratophyllum demersum HOM05D006939 ORTHO05D008616 2.3e-09 67.4 145 35.9


User provided reference genes

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