Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10013691m.g Eutrema salsugineum HOM05D006017 ORTHO05D007821 7.2e-250 866.7 410 100.0
Sp6g16110 Schrenkiella parvula HOM05D006017 ORTHO05D007821 2.6e-231 805.1 459 84.5
BcaC03g14354 Brassica carinata HOM05D006017 ORTHO05D007821 8.2e-230 800.0 459 83.7
BolC2t07897H Brassica oleracea HOM05D006017 ORTHO05D007821 1.8e-229 798.9 459 83.4
C02p17670 Brassica napus HOM05D006017 ORTHO05D007821 2.4e-229 798.5 459 83.4
BcaB05g22107 Brassica carinata HOM05D006017 ORTHO05D007821 3.5e-228 794.7 459 83.4
A02p10590 Brassica napus HOM05D006017 ORTHO05D007821 1.0e-224 783.1 452 82.7
BraA02t06124Z Brassica rapa HOM05D006017 ORTHO05D007821 1.0e-224 783.1 452 82.7
AL8G29200 Arabidopsis lyrata HOM05D006017 ORTHO05D007821 4.0e-224 781.2 457 82.3
Carub.0008s1436 Capsella rubella HOM05D006017 ORTHO05D007821 6.8e-224 780.4 455 82.4
AT5G54080 Arabidopsis thaliana HOM05D006017 ORTHO05D007821 7.5e-223 776.9 457 81.8
Aa31LG3G9950 Aethionema arabicum HOM05D006017 ORTHO05D007821 8.3e-222 773.5 453 82.3
CARHR267270 Cardamine hirsuta HOM05D006017 ORTHO05D007821 2.7e-220 768.5 457 81.2
THA.LOC104811882 Tarenaya hassleriana HOM05D006017 ORTHO05D007821 2.5e-210 735.3 455 77.1
Hma1.2p1_0416F.1_g148570 Hydrangea macrophylla HOM05D006017 ORTHO05D007821 3.0e-195 685.3 452 72.3
Cpa.g.sc131.80 Carica papaya HOM05D006017 ORTHO05D007821 3.9e-195 684.9 433 74.1
Peaxi162Scf00000g00262 Petunia axillaris HOM05D006017 ORTHO05D007821 1.2e-193 679.9 446 72.9
TWI38G0439 Tripterygium wilfordii HOM05D006017 ORTHO05D007821 8.1e-193 677.2 454 70.5
MSTRG.14945 Avicennia marina HOM05D006017 ORTHO05D007821 1.4e-192 676.4 433 72.5
Sopen12g005880 Solanum pennellii HOM05D006017 ORTHO05D007821 1.4e-192 676.4 448 70.5
Solyc12g014100.2 Solanum lycopersicum HOM05D006017 ORTHO05D007821 1.8e-192 676.0 448 70.3
Rhsim04G0023700 Rhododendron simsii HOM05D006017 ORTHO05D007821 3.1e-192 675.2 438 72.6
PGSC0003DMG400015330 Solanum tuberosum HOM05D006017 ORTHO05D007821 5.2e-192 674.5 448 70.5
Dinv14956 Davidia involucrata HOM05D006017 ORTHO05D007821 3.4e-191 671.8 449 70.6
Gorai.002G065000 Gossypium raimondii HOM05D006017 ORTHO05D007821 3.4e-191 671.8 449 71.0
Thecc.07G102400 Theobroma cacao HOM05D006017 ORTHO05D007821 4.4e-191 671.4 432 73.6
ClCG07G009900 Citrullus lanatus HOM05D006017 ORTHO05D007821 7.5e-191 670.6 452 70.6
Gohir.A01G059400 Gossypium hirsutum HOM05D006017 ORTHO05D007821 1.7e-190 669.5 449 71.0
Cfa019614 Carpinus fangiana HOM05D006017 ORTHO05D007821 2.9e-190 668.7 457 70.2
Atru.chr2.2344 Acer truncatum HOM05D006017 ORTHO05D007821 3.7e-190 668.3 450 70.4
Haze_09368 Corylus avellana HOM05D006017 ORTHO05D007821 3.7e-190 668.3 475 68.4
Gohir.D01G045400 Gossypium hirsutum HOM05D006017 ORTHO05D007821 4.9e-190 667.9 449 70.6
Manes.03G103900 Manihot esculenta HOM05D006017 ORTHO05D007821 4.9e-190 667.9 430 72.8
Eucgr.F01184 Eucalyptus grandis HOM05D006017 ORTHO05D007821 6.4e-190 667.5 432 73.1
CSS0036883 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 1.4e-189 666.4 433 72.1
Eucgr.F01185 Eucalyptus grandis HOM05D006017 ORTHO05D007821 5.4e-189 664.5 453 69.8
CiPaw.12G115700 Carya illinoinensis HOM05D006017 ORTHO05D007821 7.1e-189 664.1 441 70.3
Lsat_1_v5_gn_9_98620 Lactuca sativa HOM05D006017 ORTHO05D007821 1.2e-188 663.3 453 69.1
vmacro09508 Vaccinium macrocarpon HOM05D006017 ORTHO05D007821 1.6e-188 662.9 466 68.0
PSO541G6385 Papaver somniferum HOM05D006017 ORTHO05D007821 2.7e-188 662.1 448 69.9
Migut.M00760 Erythranthe guttata HOM05D006017 ORTHO05D007821 3.5e-188 661.8 433 72.1
CsaV3_4G008430 Cucumis sativus L. HOM05D006017 ORTHO05D007821 6.0e-188 661.0 452 69.2
ECA240G4517 Erigeron canadensis HOM05D006017 ORTHO05D007821 6.0e-188 661.0 449 69.5
DCAR_028453 Daucus carota HOM05D006017 ORTHO05D007821 1.3e-187 659.8 450 68.9
Prupe.4G172100 Prunus persica HOM05D006017 ORTHO05D007821 1.7e-187 659.4 450 68.7
Sed0020976 Sechium edule HOM05D006017 ORTHO05D007821 2.3e-187 659.1 452 69.7
Sc03g0010290 Simmondsia chinensis HOM05D006017 ORTHO05D007821 2.3e-187 659.1 439 70.6
RcHm_v2.0_Chr5g0031821 Rosa chinensis HOM05D006017 ORTHO05D007821 3.0e-187 658.7 436 69.7
Actinidia18784 Actinidia chinensis HOM05D006017 ORTHO05D007821 3.9e-187 658.3 453 69.3
FAN16G2700 Fragaria x ananassa HOM05D006017 ORTHO05D007821 5.1e-187 657.9 436 70.0
MBI07_g06432_MAGBIO Magnolia biondii HOM05D006017 ORTHO05D007821 5.1e-187 657.9 433 70.4
MELO3C016089.2 Cucumis melo HOM05D006017 ORTHO05D007821 8.6e-187 657.1 449 69.7
Cc05_g11510 Coffea canephora HOM05D006017 ORTHO05D007821 1.1e-186 656.8 448 69.2
FAN11G3087 Fragaria x ananassa HOM05D006017 ORTHO05D007821 1.5e-186 656.4 432 70.6
HanXRQChr03g0070991 Helianthus annuus HOM05D006017 ORTHO05D007821 3.3e-186 655.2 429 71.3
PGR083G0123 Punica granatum HOM05D006017 ORTHO05D007821 9.5e-186 653.7 435 71.5
Lj3g0015312 Lotus japonicus HOM05D006017 ORTHO05D007821 1.6e-185 652.9 432 71.1
Aqoxy1G02214 Aquilegia oxysepala HOM05D006017 ORTHO05D007821 2.8e-185 652.1 448 68.8
GSVIVG01014248001 Vitis vinifera HOM05D006017 ORTHO05D007821 3.6e-185 651.7 434 70.5
EL10Ac4g08290 Beta vulgaris HOM05D006017 ORTHO05D007821 1.4e-184 649.8 434 70.3
Lj8A152T86 Lonicera japonica HOM05D006017 ORTHO05D007821 1.4e-184 649.8 451 68.5
CANSAT35G1773 Cannabis sativa HOM05D006017 ORTHO05D007821 1.8e-184 649.4 435 70.6
CAN.G739.4 Capsicum annuum HOM05D006017 ORTHO05D007821 4.0e-184 648.3 472 66.3
PSO675G4947 Papaver somniferum HOM05D006017 ORTHO05D007821 5.2e-184 647.9 454 68.1
QL08p027671 Quercus lobata HOM05D006017 ORTHO05D007821 6.8e-184 647.5 440 69.8
CiPaw.11G165400 Carya illinoinensis HOM05D006017 ORTHO05D007821 1.5e-183 646.4 431 69.8
Glyma.12G158600 Glycine max HOM05D006017 ORTHO05D007821 2.0e-183 646.0 432 71.1
Medtr8g463280 Medicago truncatula HOM05D006017 ORTHO05D007821 7.6e-183 644.0 432 69.7
AUR62019513 Chenopodium quinoa HOM05D006017 ORTHO05D007821 9.9e-183 643.7 438 68.9
Psat4g138640 Pisum sativum HOM05D006017 ORTHO05D007821 2.9e-182 642.1 429 71.3
Phvul.011G148800 Phaseolus vulgaris HOM05D006017 ORTHO05D007821 1.1e-181 640.2 432 70.1
Ca_23058_v3 Cicer arietinum L. HOM05D006017 ORTHO05D007821 1.4e-181 639.8 443 69.1
Ca_30664_v3 Cicer arietinum L. HOM05D006017 ORTHO05D007821 1.4e-181 639.8 443 69.1
arahy.Tifrunner.gnm1.ann1.DSNA77 Arachis hypogaea HOM05D006017 ORTHO05D007821 1.9e-181 639.4 433 69.1
arahy.Tifrunner.gnm1.ann1.FV2XB3 Arachis hypogaea HOM05D006017 ORTHO05D007821 1.9e-181 639.4 433 69.3
Lalb_Chr03g0030841 Lupinus albus HOM05D006017 ORTHO05D007821 1.9e-181 639.4 445 68.1
ATR0749G089 Amborella trichopoda HOM05D006017 ORTHO05D007821 2.4e-181 639.0 434 67.7
FAN21G1753 Fragaria x ananassa HOM05D006017 ORTHO05D007821 9.2e-181 637.1 465 65.2
VMungo1127G0952 Vigna mungo HOM05D006017 ORTHO05D007821 1.2e-180 636.7 432 69.7
Oeu061327.1 Olea europaea HOM05D006017 ORTHO05D007821 7.8e-180 634.0 469 64.6
Oeu061328.1 Olea europaea HOM05D006017 ORTHO05D007821 7.8e-180 634.0 469 64.6
Potri.001G374100 Populus trichocarpa HOM05D006017 ORTHO05D007821 3.3e-178 628.6 437 69.1
SGA_v2.0_scaffold73G24213 Striga asiatica HOM05D006017 ORTHO05D007821 6.2e-177 624.4 446 67.3
AUR62036125 Chenopodium quinoa HOM05D006017 ORTHO05D007821 3.1e-176 622.1 441 67.1
Ah.04g164440 Amaranthus hybridus HOM05D006017 ORTHO05D007821 6.9e-176 620.9 425 70.4
unitig_46.g18314 Utricularia gibba HOM05D006017 ORTHO05D007821 6.9e-176 620.9 439 67.9
Nitab4.5_0003077g0020 Nicotiana tabacum HOM05D006017 ORTHO05D007821 2.0e-175 619.4 468 64.3
Sabra16G0246500 Salix brachista HOM05D006017 ORTHO05D007821 9.9e-175 617.1 436 67.9
Os06g0103300 Oryza sativa ssp. japonica HOM05D006017 ORTHO05D007821 1.4e-173 613.2 450 65.8
HPP92_003902 Vanilla planifolia HOM05D006017 ORTHO05D007821 2.4e-173 612.5 438 64.8
CDE02G3882 Ceratophyllum demersum HOM05D006017 ORTHO05D007821 8.1e-169 597.4 403 68.7
Zm00001eb379510 Zea mays HOM05D006017 ORTHO05D007821 1.8e-168 596.3 446 65.0
Ciclev10008509m.g Citrus clementina HOM05D006017 ORTHO05D007821 2.4e-165 585.9 384 72.7
Nn1g04303 Nelumbo nucifera HOM05D006017 ORTHO05D007821 2.3e-163 579.3 378 72.0
Mapoly0078s0002 Marchantia polymorpha HOM05D006017 ORTHO05D007821 1.7e-158 563.1 438 61.9
Hund22764 Selenicereus undatus HOM05D006017 ORTHO05D007821 1.0e-155 553.9 397 67.3
AagrBONN_evm.TU.Sc2ySwM_228.2578 Anthoceros agrestis HOM05D006017 ORTHO05D007821 9.6e-154 547.4 424 60.1
Pp3c16_940 Physcomitrium patens HOM05D006017 ORTHO05D007821 1.4e-152 543.5 437 58.8
SMO119G0176 Selaginella moellendorffii HOM05D006017 ORTHO05D007821 4.2e-141 505.4 432 56.7
Duzib170G0488 Durio zibethinus HOM05D006017 ORTHO05D007821 1.6e-140 503.4 452 57.3
Nitab4.5_0005445g0020 Nicotiana tabacum HOM05D006017 ORTHO05D007821 4.1e-136 488.8 415 59.3
Cre02.g091200 Chlamydomonas reinhardtii HOM05D006017 ORTHO05D007821 7.7e-127 458.0 443 53.5
FvH4_3g19020 Fragaria vesca HOM05D006017 ORTHO05D007821 1.4e-120 437.2 321 64.5
PRCOL_00000185 Prasinoderma coloniale HOM05D006017 ORTHO05D007821 2.4e-120 436.4 457 50.3
Hma1.2p1_0416F.1_g148580 Hydrangea macrophylla HOM05D006017 ORTHO05D007821 7.0e-120 434.9 311 67.5
TPR.G22540 Trifolium pratense HOM05D006017 ORTHO05D007821 7.7e-119 431.4 361 60.7
SalBow8G4076 Salvia bowleyana HOM05D006017 ORTHO05D007821 9.4e-117 424.5 304 66.1
MD03G1237500 Malus domestica HOM05D006017 ORTHO05D007821 1.4e-104 384.0 300 62.0
Glyma.06G234200 Glycine max HOM05D006017 ORTHO05D007821 2.4e-96 356.7 217 75.1
BcaC04g20394 Brassica carinata HOM05D006017 ORTHO05D007821 4.3e-85 319.3 412 48.8
MD03G1237300 Malus domestica HOM05D006017 ORTHO05D007821 2.4e-72 276.9 159 78.0
SEGI_01915 Sequoiadendron giganteum HOM05D006017 ORTHO05D007821 8.1e-68 261.9 160 73.8
Oeu061326.1 Olea europaea HOM05D006017 ORTHO05D007821 6.0e-63 245.7 133 83.5
TAR436G0001 Trochodendron aralioides HOM05D006017 ORTHO05D007821 1.3e-60 238.0 132 82.6
Nitab4.5_0004022g0010 Nicotiana tabacum HOM05D006017 ORTHO05D007821 1.1e-56 224.9 120 85.8
CSS0003418 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 8.4e-49 198.7 174 59.2
CSS0021316 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 7.9e-47 192.2 114 71.9
C09p44170 Brassica napus HOM05D006017 ORTHO05D017343 1.7e-41 174.5 278 43.9
A10p11370 Brassica napus HOM05D006017 ORTHO05D007821 8.4e-41 172.2 217 48.4
FAN25G2436 Fragaria x ananassa HOM05D006017 ORTHO05D007821 9.6e-37 158.7 102 70.6
Rhsim07G0153900 Rhododendron simsii HOM05D006017 ORTHO05D000252 6.9e-35 152.5 141 55.3
SEGI_25954 Sequoiadendron giganteum HOM05D006017 ORTHO05D007821 5.1e-30 136.3 101 62.4
Glyma.06G234050 Glycine max HOM05D006017 ORTHO05D007821 3.3e-29 133.7 79 74.7
BolC9t57289H Brassica oleracea HOM05D006017 ORTHO05D104628 1.1e-24 118.6 155 45.8
FAN25G2983 Fragaria x ananassa HOM05D006017 ORTHO05D007821 7.2e-24 115.9 90 58.9
SEGI_23248 Sequoiadendron giganteum HOM05D006017 ORTHO05D007821 4.3e-21 106.7 85 57.6
TWI38G0821 Tripterygium wilfordii HOM05D006017 ORTHO05D413584 1.1e-19 102.1 62 71.0
CSS0031230 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 4.1e-19 100.1 105 48.6
TWI38G1497 Tripterygium wilfordii HOM05D006017 ORTHO05D007821 6.7e-14 82.8 48 72.9
HPP92_003866 Vanilla planifolia HOM05D006017 ORTHO05D007821 2.9e-09 67.4 54 59.3
BraA10t43231Z Brassica rapa HOM05D006017 ORTHO05D017343 5.5e-08 63.2 62 50.0


User provided reference genes

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