Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10013487m.g Eutrema salsugineum HOM05D006663 ORTHO05D008269 6.3e-279 963.4 459 100.0
AL6G17900 Arabidopsis lyrata HOM05D006663 ORTHO05D008269 2.1e-274 948.3 459 98.3
AT5G07590 Arabidopsis thaliana HOM05D006663 ORTHO05D008269 6.1e-274 946.8 459 98.3
BcaC06g32493 Brassica carinata HOM05D006663 ORTHO05D008269 1.0e-273 946.0 459 95.9
A10p29330 Brassica napus HOM05D006663 ORTHO05D008269 3.0e-273 944.5 459 95.6
C09p69700 Brassica napus HOM05D006663 ORTHO05D008269 4.0e-273 944.1 459 95.9
BolC9t59713H Brassica oleracea HOM05D006663 ORTHO05D008269 4.0e-273 944.1 459 95.9
Sp6g35280 Schrenkiella parvula HOM05D006663 ORTHO05D008269 4.0e-273 944.1 459 97.8
Carub.0006s0657 Capsella rubella HOM05D006663 ORTHO05D008269 6.8e-273 943.3 459 97.6
CARHR205560 Cardamine hirsuta HOM05D006663 ORTHO05D008269 9.8e-272 939.5 459 97.4
Aa31LG3G18830 Aethionema arabicum HOM05D006663 ORTHO05D008269 2.1e-266 921.8 486 90.5
THA.LOC104801603 Tarenaya hassleriana HOM05D006663 ORTHO05D008269 1.6e-258 895.6 460 88.7
COL.COLO4_37343 Corchorus olitorius HOM05D006663 ORTHO05D008269 5.8e-248 860.5 459 85.4
Thecc.03G149200 Theobroma cacao HOM05D006663 ORTHO05D008269 5.8e-248 860.5 459 85.6
Cpa.g.sc13.257 Carica papaya HOM05D006663 ORTHO05D008269 3.7e-247 857.8 459 84.7
Gorai.008G214300 Gossypium raimondii HOM05D006663 ORTHO05D008269 7.8e-245 850.1 459 84.3
Gohir.A12G196700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 2.3e-244 848.6 459 83.9
TWI39G0071 Tripterygium wilfordii HOM05D006663 ORTHO05D008269 8.6e-244 846.7 459 82.8
GSVIVG01013975001 Vitis vinifera HOM05D006663 ORTHO05D008269 1.5e-243 845.9 459 83.2
QL09p027994 Quercus lobata HOM05D006663 ORTHO05D008269 1.6e-242 842.4 475 81.1
CiPaw.07G185300 Carya illinoinensis HOM05D006663 ORTHO05D008269 4.0e-241 837.8 461 82.6
FvH4_7g26970 Fragaria vesca HOM05D006663 ORTHO05D008269 1.2e-240 836.3 460 83.5
RcHm_v2.0_Chr1g0373701 Rosa chinensis HOM05D006663 ORTHO05D008269 1.5e-240 835.9 461 83.5
Hma1.2p1_1580F.1_g291900 Hydrangea macrophylla HOM05D006663 ORTHO05D008269 2.0e-240 835.5 459 82.4
Manes.14G038500 Manihot esculenta HOM05D006663 ORTHO05D008269 2.0e-240 835.5 459 82.8
MD07G1249200 Malus domestica HOM05D006663 ORTHO05D008269 4.4e-240 834.3 460 82.4
Atru.chr1.907 Acer truncatum HOM05D006663 ORTHO05D008269 1.3e-239 832.8 460 82.2
FAN06G2606 Fragaria x ananassa HOM05D006663 ORTHO05D008269 1.7e-239 832.4 461 83.3
Potri.003G151400 Populus trichocarpa HOM05D006663 ORTHO05D008269 3.7e-239 831.2 459 82.1
FAN06G1593 Fragaria x ananassa HOM05D006663 ORTHO05D008269 2.4e-238 828.6 461 83.1
ClCG01G004680 Citrullus lanatus HOM05D006663 ORTHO05D008269 7.1e-238 827.0 459 80.8
MD01G1177500 Malus domestica HOM05D006663 ORTHO05D008269 2.1e-237 825.5 461 82.0
arahy.Tifrunner.gnm1.ann1.JS0B2B Arachis hypogaea HOM05D006663 ORTHO05D008269 7.8e-237 823.5 459 81.3
Potri.001G079100 Populus trichocarpa HOM05D006663 ORTHO05D008269 7.8e-237 823.5 459 82.8
VMungo0720G2856 Vigna mungo HOM05D006663 ORTHO05D008269 1.0e-236 823.2 459 81.0
Phvul.007G136100 Phaseolus vulgaris HOM05D006663 ORTHO05D008269 1.3e-236 822.8 459 81.3
Sed0007931 Sechium edule HOM05D006663 ORTHO05D008269 1.3e-236 822.8 459 80.8
Actinidia13608 Actinidia chinensis HOM05D006663 ORTHO05D008269 3.0e-236 821.6 460 81.3
arahy.Tifrunner.gnm1.ann1.78X8E3 Arachis hypogaea HOM05D006663 ORTHO05D008269 3.9e-236 821.2 459 80.8
Glyma.20G195600 Glycine max HOM05D006663 ORTHO05D008269 8.6e-236 820.1 459 80.6
CsaV3_5G004880 Cucumis sativus L. HOM05D006663 ORTHO05D008269 1.5e-235 819.3 459 80.8
Eucgr.A02922 Eucalyptus grandis HOM05D006663 ORTHO05D008269 3.3e-235 818.1 461 80.9
Sabra03G0109600 Salix brachista HOM05D006663 ORTHO05D008269 5.6e-235 817.4 481 78.4
CSS0030206 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 2.1e-234 815.5 460 81.1
CSS0049195 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 2.1e-234 815.5 460 81.1
Lj5g0020638 Lotus japonicus HOM05D006663 ORTHO05D008269 6.2e-234 813.9 459 80.6
MELO3C005467.2 Cucumis melo HOM05D006663 ORTHO05D008269 1.1e-233 813.1 459 80.4
Sc10g0004730 Simmondsia chinensis HOM05D006663 ORTHO05D008269 1.8e-233 812.4 460 81.5
Rhsim03G0161500 Rhododendron simsii HOM05D006663 ORTHO05D008269 6.8e-233 810.4 460 80.0
CANSAT56G2550 Cannabis sativa HOM05D006663 ORTHO05D008269 1.5e-232 809.3 460 80.7
TAR636G2266 Trochodendron aralioides HOM05D006663 ORTHO05D008269 2.6e-232 808.5 460 78.7
Lj1C976T20 Lonicera japonica HOM05D006663 ORTHO05D008269 7.6e-232 807.0 460 79.3
Sabra01G0056700 Salix brachista HOM05D006663 ORTHO05D008269 7.6e-232 807.0 459 81.5
Psat0s1505g0040 Pisum sativum HOM05D006663 ORTHO05D008269 2.2e-231 805.4 459 80.4
Lalb_Chr02g0150831 Lupinus albus HOM05D006663 ORTHO05D008269 2.9e-231 805.1 459 79.7
Medtr1g090310 Medicago truncatula HOM05D006663 ORTHO05D008269 4.9e-231 804.3 459 80.2
HanXRQChr05g0138181 Helianthus annuus HOM05D006663 ORTHO05D008269 1.4e-230 802.7 461 78.5
Aqoxy7G00844 Aquilegia oxysepala HOM05D006663 ORTHO05D008269 4.6e-229 797.7 460 78.9
ECA233G2092 Erigeron canadensis HOM05D006663 ORTHO05D008269 4.6e-229 797.7 458 79.0
MSTRG.8846 Avicennia marina HOM05D006663 ORTHO05D008269 2.3e-228 795.4 460 78.5
Lsat_1_v5_gn_8_9600 Lactuca sativa HOM05D006663 ORTHO05D008269 3.0e-228 795.0 461 78.7
CANSAT56G3894 Cannabis sativa HOM05D006663 ORTHO05D008269 6.6e-228 793.9 459 79.3
Migut.F00523 Erythranthe guttata HOM05D006663 ORTHO05D008269 5.6e-227 790.8 460 78.0
Oeu042534.1 Olea europaea HOM05D006663 ORTHO05D008269 9.6e-227 790.0 460 78.0
Cc02_g04690 Coffea canephora HOM05D006663 ORTHO05D008269 1.2e-226 789.6 460 79.3
Ciclev10004937m.g Citrus clementina HOM05D006663 ORTHO05D008269 3.1e-225 785.0 459 79.7
DCAR_020172 Daucus carota HOM05D006663 ORTHO05D008269 3.8e-223 778.1 459 77.3
PSO675G3877 Papaver somniferum HOM05D006663 ORTHO05D008269 3.8e-223 778.1 455 78.0
SGA_v2.0_scaffold60G20812 Striga asiatica HOM05D006663 ORTHO05D008269 3.2e-222 775.0 460 76.7
ATR0057G058 Amborella trichopoda HOM05D006663 ORTHO05D008269 7.8e-221 770.4 462 75.8
PSO732G0765 Papaver somniferum HOM05D006663 ORTHO05D008269 3.0e-220 768.5 443 78.1
Sopen03g024320 Solanum pennellii HOM05D006663 ORTHO05D008269 3.9e-220 768.1 460 78.7
PGSC0003DMG400010747 Solanum tuberosum HOM05D006663 ORTHO05D008269 3.9e-220 768.1 460 78.3
TPR.G13385 Trifolium pratense HOM05D006663 ORTHO05D008269 2.1e-218 762.3 497 72.0
AUR62009686 Chenopodium quinoa HOM05D006663 ORTHO05D008269 2.8e-218 761.9 459 77.8
EL10Ac7g15901 Beta vulgaris HOM05D006663 ORTHO05D008269 3.6e-218 761.5 459 75.6
Prupe.2G272800 Prunus persica HOM05D006663 ORTHO05D008269 1.1e-217 760.0 459 76.7
Hund24931 Selenicereus undatus HOM05D006663 ORTHO05D008269 3.4e-216 755.0 458 75.3
Glyma.10G194400 Glycine max HOM05D006663 ORTHO05D008269 9.3e-214 746.9 459 75.2
Os10g0563300 Oryza sativa ssp. japonica HOM05D006663 ORTHO05D008269 1.5e-208 729.6 464 73.3
Nn1g00884 Nelumbo nucifera HOM05D006663 ORTHO05D008269 3.5e-205 718.4 460 72.6
SEGI_30026 Sequoiadendron giganteum HOM05D006663 ORTHO05D008269 5.1e-204 714.5 460 70.9
AUR62001890 Chenopodium quinoa HOM05D006663 ORTHO05D008269 1.2e-200 703.4 459 71.2
SHI14080 Sapria himalayana HOM05D006663 ORTHO05D008269 2.6e-200 702.2 498 67.5
SMO340G0268 Selaginella moellendorffii HOM05D006663 ORTHO05D008269 2.2e-186 656.0 454 67.8
PGR042G0458 Punica granatum HOM05D006663 ORTHO05D008269 2.2e-183 646.0 458 67.0
HPP92_025692 Vanilla planifolia HOM05D006663 ORTHO05D008269 5.5e-182 641.3 393 74.3
Pp3c13_8720 Physcomitrium patens HOM05D006663 ORTHO05D008269 2.1e-181 639.4 450 64.2
Pp3c3_11450 Physcomitrium patens HOM05D006663 ORTHO05D008269 1.3e-178 630.2 450 63.8
Pp3c9_7850 Physcomitrium patens HOM05D006663 ORTHO05D008269 1.8e-177 626.3 456 64.7
Haze_22195 Corylus avellana HOM05D006663 ORTHO05D008269 5.3e-177 624.8 340 83.5
Gohir.A09G080000 Gossypium hirsutum HOM05D006663 ORTHO05D008269 3.4e-176 622.1 338 83.7
Gohir.D09G034800 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.3e-175 620.2 338 83.7
FAN10G3253 Fragaria x ananassa HOM05D006663 ORTHO05D008269 8.5e-175 617.5 338 84.0
Mapoly0178s0015 Marchantia polymorpha HOM05D006663 ORTHO05D008269 5.5e-174 614.8 462 62.3
FAN03G0477 Fragaria x ananassa HOM05D006663 ORTHO05D008269 5.7e-171 604.7 338 82.8
Ca_10369_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 7.0e-169 597.8 341 80.9
Ca_10419_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 7.0e-169 597.8 341 80.9
vmacro06835 Vaccinium macrocarpon HOM05D006663 ORTHO05D008269 3.8e-167 592.0 338 82.0
Dinv06596 Davidia involucrata HOM05D006663 ORTHO05D008269 5.2e-164 581.6 323 82.0
CBR_g49329 Chara braunii HOM05D006663 ORTHO05D008269 2.0e-163 579.7 464 58.8
SalBow3G3051 Salvia bowleyana HOM05D006663 ORTHO05D008269 3.7e-162 575.5 337 78.6
Nitab4.5_0007080g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 8.2e-162 574.3 337 80.4
Gohir.D04G037700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 7.0e-161 571.2 320 81.9
Gohir.D12G199100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 6.8e-148 528.1 290 82.4
Nitab4.5_0021979g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 1.2e-147 527.3 304 82.2
Peaxi162Scf00271g00618 Petunia axillaris HOM05D006663 ORTHO05D008269 7.0e-145 518.1 337 75.7
Solyc03g093490.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 7.0e-145 518.1 308 81.5
SalBow3G2644 Salvia bowleyana HOM05D006663 ORTHO05D008269 2.0e-139 500.0 291 79.0
AagrBONN_evm.TU.Sc2ySwM_228.1080 Anthoceros agrestis HOM05D006663 ORTHO05D008269 1.6e-133 480.3 338 65.7
Zm00001eb325360 Zea mays HOM05D006663 ORTHO05D008269 1.0e-132 477.6 277 78.3
CDE09G0338 Ceratophyllum demersum HOM05D006663 ORTHO05D008269 6.8e-124 448.4 281 73.7
PRCOL_00004773 Prasinoderma coloniale HOM05D006663 ORTHO05D008269 1.9e-102 377.1 449 40.3
Cre13.g567150 Chlamydomonas reinhardtii HOM05D006663 ORTHO05D008269 1.1e-89 334.7 486 35.6
Solyc03g093500.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 9.1e-68 261.9 164 70.7
SHI00707 Sapria himalayana HOM05D006663 ORTHO05D008269 1.8e-52 211.1 163 60.7
Gohir.A03G137100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 2.2e-50 204.1 110 85.5
Gohir.A07G166700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 2.2e-50 204.1 110 85.5
Gohir.A09G003500 Gossypium hirsutum HOM05D006663 ORTHO05D008269 5.0e-50 203.0 110 84.5
Atru.chr4.2082 Acer truncatum HOM05D006663 ORTHO05D008269 1.2e-38 165.2 98 77.6
BcaC06g32421 Brassica carinata HOM05D006663 ORTHO05D008269 1.1e-15 89.0 40 100.0


User provided reference genes

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