Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10012291m.g Eutrema salsugineum HOM05D009997 ORTHO05D013470 1.7e-44 182.2 86 100.0
Thhalv10015154m.g Eutrema salsugineum HOM05D009997 ORTHO05D013470 3.7e-39 164.5 86 88.4
C03p13920 Brassica napus HOM05D009997 ORTHO05D013470 3.5e-29 131.3 87 75.9
A03p11850 Brassica napus HOM05D009997 ORTHO05D013470 7.7e-29 130.2 87 75.9
BraA03t10496Z Brassica rapa HOM05D009997 ORTHO05D013470 1.7e-28 129.0 87 74.7
BolC3t13839H Brassica oleracea HOM05D009997 ORTHO05D013470 2.9e-28 128.3 87 74.7
AL1G27870 Arabidopsis lyrata HOM05D009997 ORTHO05D013470 4.7e-18 94.4 85 56.5
Carub.0001s1553 Capsella rubella HOM05D009997 ORTHO05D013470 6.8e-17 90.5 87 57.5
AT1G15757 Arabidopsis thaliana HOM05D009997 ORTHO05D013470 5.7e-16 87.4 85 54.1
Carub.0007s3316 Capsella rubella HOM05D009997 ORTHO05D013470 9.8e-16 86.7 86 52.3
BcaB03g14524 Brassica carinata HOM05D009997 ORTHO05D013470 5.9e-13 77.4 88 50.0
BcaC07g41482 Brassica carinata HOM05D009997 ORTHO05D013470 2.9e-12 75.1 92 50.0
C08p44800 Brassica napus HOM05D009997 ORTHO05D013470 2.9e-12 75.1 92 50.0
BolC8t52025H Brassica oleracea HOM05D009997 ORTHO05D013470 2.9e-12 75.1 92 50.0
Sp1g14050 Schrenkiella parvula HOM05D009997 ORTHO05D013470 8.6e-12 73.6 86 48.8
AT2G12465 Arabidopsis thaliana HOM05D008895 ORTHO05D010761 1.9e-11 72.4 85 51.8
BraA09t41495Z Brassica rapa HOM05D009997 ORTHO05D013470 1.2e-10 69.7 92 50.0
Carub.0003s3322 Capsella rubella HOM05D008895 ORTHO05D010761 4.7e-10 67.8 84 47.6
A09p61230 Brassica napus HOM05D009997 ORTHO05D013470 6.1e-10 67.4 92 48.9
Carub.0008s0698 Capsella rubella HOM05D008895 ORTHO05D010761 1.0e-09 66.6 81 44.4
Carub.0008s0699 Capsella rubella HOM05D008895 ORTHO05D010761 1.4e-09 66.2 81 44.4
AT5G59105 Arabidopsis thaliana HOM05D009997 ORTHO05D011114 2.3e-09 65.5 83 45.8
AT2G40995 Arabidopsis thaliana HOM05D009157 ORTHO05D011114 4.0e-09 64.7 87 43.7
CARHR037560 Cardamine hirsuta HOM05D009157 ORTHO05D011114 4.0e-09 64.7 82 42.7
AL2G17930 Arabidopsis lyrata HOM05D008895 ORTHO05D010761 6.8e-09 63.9 85 47.1
AL8G19480 Arabidopsis lyrata HOM05D009997 ORTHO05D038671 1.2e-08 63.2 63 54.0
BolC7t42591H Brassica oleracea HOM05D009997 ORTHO05D011114 1.2e-08 63.2 83 49.4
Thhalv10015910m.g Eutrema salsugineum HOM05D009997 ORTHO05D011114 1.5e-08 62.8 83 45.8
AT1G58055 Arabidopsis thaliana HOM05D008895 ORTHO05D010761 7.5e-08 60.5 85 45.9
AL8G19420 Arabidopsis lyrata HOM05D008895 ORTHO05D010761 9.8e-08 60.1 82 45.1
AL8G19430 Arabidopsis lyrata HOM05D008895 ORTHO05D010761 9.8e-08 60.1 82 45.1
AL8G19452 Arabidopsis lyrata HOM05D008895 ORTHO05D010761 9.8e-08 60.1 82 45.1
AT5G42223 Arabidopsis thaliana HOM05D008895 ORTHO05D038671 1.3e-07 59.7 83 44.6
AL872U10010 Arabidopsis lyrata HOM05D009157 ORTHO05D011114 2.2e-07 58.9 88 42.0
BraA07t29157Z Brassica rapa HOM05D009997 ORTHO05D011114 2.2e-07 58.9 83 45.8
AL8G35590 Arabidopsis lyrata HOM05D009997 ORTHO05D011114 3.7e-07 58.2 90 42.2
AT5G42232 Arabidopsis thaliana HOM05D008895 ORTHO05D010761 3.7e-07 58.2 81 42.0
AL8G19410 Arabidopsis lyrata HOM05D008895 ORTHO05D010761 6.3e-07 57.4 82 43.9
AT5G42235 Arabidopsis thaliana HOM05D008895 ORTHO05D010761 6.3e-07 57.4 85 45.9
AL8G19400 Arabidopsis lyrata HOM05D008895 ORTHO05D010761 8.3e-07 57.0 82 43.9
A10p28230 Brassica napus HOM05D016145 ORTHO05D018425 1.4e-06 56.2 82 42.7
AL1G66420 Arabidopsis lyrata HOM05D014230 ORTHO05D015926 2.4e-06 55.5 88 43.2
AL2G14490 Arabidopsis lyrata HOM05D012646 ORTHO05D017422 2.4e-06 55.5 90 33.3
AT1G56553 Arabidopsis thaliana HOM05D014230 ORTHO05D015926 2.4e-06 55.5 88 42.0
A09p26810 Brassica napus HOM05D009779 ORTHO05D013534 3.1e-06 55.1 88 37.5
BraA09t38252Z Brassica rapa HOM05D009779 ORTHO05D013534 3.1e-06 55.1 88 37.5
AT2G12475 Arabidopsis thaliana HOM05D008895 ORTHO05D010761 4.1e-06 54.7 85 42.4
BraA06t24784Z Brassica rapa HOM05D009157 ORTHO05D011114 5.4e-06 54.3 85 40.0
BraA10t44872Z Brassica rapa HOM05D016145 ORTHO05D018425 5.4e-06 54.3 82 41.5
AL4G38970 Arabidopsis lyrata HOM05D009157 ORTHO05D031338 7.0e-06 53.9 89 38.2
BolC3t15237H Brassica oleracea HOM05D009779 ORTHO05D013534 9.2e-06 53.5 88 37.5


User provided reference genes

Program Settings