Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10012254m.g Eutrema salsugineum HOM05D001568 ORTHO05D008804 3.6e-49 198.0 102 100.0
Thhalv10011739m.g Eutrema salsugineum HOM05D001568 ORTHO05D008804 4.8e-46 187.6 102 95.1
Carub.0151s0002 Capsella rubella HOM05D001568 ORTHO05D008804 5.9e-44 180.6 102 90.2
BcaB07g33452 Brassica carinata HOM05D001568 ORTHO05D008804 2.2e-43 178.7 102 89.2
AT1G50000 Arabidopsis thaliana HOM05D001568 ORTHO05D008804 2.9e-43 178.3 102 90.2
Sp1g36840 Schrenkiella parvula HOM05D001568 ORTHO05D008804 5.0e-43 177.6 102 89.2
SpUn0137_0040 Schrenkiella parvula HOM05D001568 ORTHO05D008804 5.0e-43 177.6 102 89.2
BcaC08g43178 Brassica carinata HOM05D001568 ORTHO05D008804 1.9e-42 175.6 100 89.0
CARHR040100 Cardamine hirsuta HOM05D001568 ORTHO05D008804 2.5e-42 175.3 102 89.2
AL1G57570 Arabidopsis lyrata HOM05D001568 ORTHO05D008804 4.2e-42 174.5 102 88.2
A06p03430 Brassica napus HOM05D001568 ORTHO05D008804 3.6e-41 171.4 103 88.3
BolC6t35607H Brassica oleracea HOM05D001568 ORTHO05D008804 1.8e-40 169.1 101 88.1
C06p04780 Brassica napus HOM05D001568 ORTHO05D008804 4.0e-40 167.9 101 87.1
Aa31LG10G4130 Aethionema arabicum HOM05D001568 ORTHO05D008804 6.7e-40 167.2 102 83.3
BraA06t23551Z Brassica rapa HOM05D001568 ORTHO05D008804 1.2e-39 166.4 101 88.1
THA.LOC104809178 Tarenaya hassleriana HOM05D001568 ORTHO05D008804 2.7e-36 155.2 99 77.8
THA.LOC104826495 Tarenaya hassleriana HOM05D001568 ORTHO05D008804 2.7e-36 155.2 99 77.8
THA.LOC104826496 Tarenaya hassleriana HOM05D001568 ORTHO05D008804 2.7e-36 155.2 99 77.8
Ca_11027_v3 Cicer arietinum L. HOM05D001568 ORTHO05D008804 2.6e-31 138.7 100 68.0
Medtr1g106055 Medicago truncatula HOM05D001568 ORTHO05D008804 5.7e-31 137.5 99 65.7
CiPaw.05G020500 Carya illinoinensis HOM05D001568 ORTHO05D008804 1.3e-30 136.3 100 67.0
TPR.G21139 Trifolium pratense HOM05D001568 ORTHO05D008804 2.8e-30 135.2 100 65.0
Atru.chr5.2305 Acer truncatum HOM05D001568 ORTHO05D008804 1.8e-29 132.5 99 66.7
TAR628G1281 Trochodendron aralioides HOM05D001568 ORTHO05D008804 2.4e-29 132.1 100 63.0
Cfa004705 Carpinus fangiana HOM05D001568 ORTHO05D008804 3.1e-29 131.7 100 64.0
Hma1.2p1_0661F.1_g198113 Hydrangea macrophylla HOM05D001568 ORTHO05D008804 4.1e-29 131.3 98 66.3
Hma1.2p1_0661F.1_g198116 Hydrangea macrophylla HOM05D001568 ORTHO05D008804 4.1e-29 131.3 98 66.3
Solyc01g106880.3 Solanum lycopersicum HOM05D001568 ORTHO05D008804 4.1e-29 131.3 99 62.6
Sopen01g049160 Solanum pennellii HOM05D001568 ORTHO05D008804 4.1e-29 131.3 99 62.6
EL10Ac9g22185 Beta vulgaris HOM05D001568 ORTHO05D008804 1.2e-28 129.8 98 63.3
Haze_10309 Corylus avellana HOM05D001568 ORTHO05D008804 1.2e-28 129.8 100 63.0
TWI14G1141 Tripterygium wilfordii HOM05D001568 ORTHO05D008804 1.2e-28 129.8 99 63.6
Ciclev10030269m.g Citrus clementina HOM05D001568 ORTHO05D008804 1.6e-28 129.4 99 67.7
Glyma.20G135600 Glycine max HOM05D001568 ORTHO05D008804 1.6e-28 129.4 99 65.7
AUR62030859 Chenopodium quinoa HOM05D001568 ORTHO05D008804 2.0e-28 129.0 100 63.0
FAN15G2988 Fragaria x ananassa HOM05D001568 ORTHO05D008804 2.0e-28 129.0 100 63.0
Lalb_Chr06g0165001 Lupinus albus HOM05D001568 ORTHO05D008804 2.0e-28 129.0 99 62.6
Nitab4.5_0001099g0070 Nicotiana tabacum HOM05D001568 ORTHO05D008804 2.0e-28 129.0 100 61.0
CSS0011887 Camellia sinensis var. sinensis HOM05D001568 ORTHO05D008804 2.7e-28 128.6 97 62.9
AUR62027019 Chenopodium quinoa HOM05D001568 ORTHO05D008804 2.7e-28 128.6 100 64.0
MD10G1109100 Malus domestica HOM05D001568 ORTHO05D008804 3.5e-28 128.3 99 61.6
Aqoxy1G00265 Aquilegia oxysepala HOM05D001568 ORTHO05D008804 4.5e-28 127.9 101 61.4
Thecc.02G119500 Theobroma cacao HOM05D001568 ORTHO05D008804 5.9e-28 127.5 99 63.6
FAN24G0164 Fragaria x ananassa HOM05D001568 ORTHO05D008804 7.7e-28 127.1 100 60.0
CAN.G606.69 Capsicum annuum HOM05D001568 ORTHO05D008804 1.0e-27 126.7 99 60.6
Potri.001G290100 Populus trichocarpa HOM05D001568 ORTHO05D008804 1.0e-27 126.7 98 63.3
arahy.Tifrunner.gnm1.ann1.804FU2 Arachis hypogaea HOM05D001568 ORTHO05D008804 1.3e-27 126.3 100 62.0
RcHm_v2.0_Chr6g0248601 Rosa chinensis HOM05D001568 ORTHO05D008804 1.3e-27 126.3 99 60.6
GSVIVG01037056001 Vitis vinifera HOM05D001568 ORTHO05D008804 1.3e-27 126.3 98 62.2
Cfa004706 Carpinus fangiana HOM05D001568 ORTHO05D008804 1.7e-27 125.9 100 62.0
Lj9A337T44 Lonicera japonica HOM05D001568 ORTHO05D008804 1.7e-27 125.9 98 60.2
Nitab4.5_0010145g0020 Nicotiana tabacum HOM05D001568 ORTHO05D008804 1.7e-27 125.9 99 60.6
MBI16_g16470_MAGBIO Magnolia biondii HOM05D001568 ORTHO05D008804 2.3e-27 125.6 98 63.3
arahy.Tifrunner.gnm1.ann1.ESII2D Arachis hypogaea HOM05D001568 ORTHO05D008804 2.9e-27 125.2 100 61.0
Gorai.008G019500 Gossypium raimondii HOM05D001568 ORTHO05D008804 2.9e-27 125.2 99 62.6
ECA240G3857 Erigeron canadensis HOM05D001568 ORTHO05D008804 3.8e-27 124.8 97 62.9
FvH4_2g03440 Fragaria vesca HOM05D001568 ORTHO05D008804 5.0e-27 124.4 100 60.0
HanXRQChr03g0072921 Helianthus annuus HOM05D001568 ORTHO05D008804 5.0e-27 124.4 98 62.2
VMungo0720G2114 Vigna mungo HOM05D001568 ORTHO05D008804 5.0e-27 124.4 100 62.0
SGA_v2.0_scaffold225G43060 Striga asiatica HOM05D001568 ORTHO05D008804 6.5e-27 124.0 101 60.4
Peaxi162Scf00016g03020 Petunia axillaris HOM05D001568 ORTHO05D008804 8.6e-27 123.6 98 59.2
Eucgr.I02493 Eucalyptus grandis HOM05D001568 ORTHO05D008804 1.1e-26 123.2 99 61.6
CANSAT25G3386 Cannabis sativa HOM05D001568 ORTHO05D008804 1.5e-26 122.9 101 61.4
Manes.07G057400 Manihot esculenta HOM05D001568 ORTHO05D008804 1.9e-26 122.5 99 60.6
Gohir.A12G018701 Gossypium hirsutum HOM05D001568 ORTHO05D008804 2.5e-26 122.1 99 60.6
Prupe.8G149200 Prunus persica HOM05D001568 ORTHO05D008804 2.5e-26 122.1 100 58.0
Nn5g30645 Nelumbo nucifera HOM05D001568 ORTHO05D008804 4.2e-26 121.3 99 58.6
Rhsim05G0092700 Rhododendron simsii HOM05D001568 ORTHO05D008804 5.5e-26 120.9 97 60.8
MSTRG.20236 Avicennia marina HOM05D001568 ORTHO05D008804 9.5e-26 120.2 101 57.4
Cc00_g17990 Coffea canephora HOM05D001568 ORTHO05D008804 9.5e-26 120.2 99 58.6
Lj1g0020001 Lotus japonicus HOM05D001568 ORTHO05D008804 9.5e-26 120.2 98 59.2
CsaV3_7G007700 Cucumis sativus L. HOM05D001568 ORTHO05D008804 1.2e-25 119.8 100 59.0
MELO3C018530.2 Cucumis melo HOM05D001568 ORTHO05D008804 2.8e-25 118.6 98 60.2
TAR376G0809 Trochodendron aralioides HOM05D001568 ORTHO05D008804 3.6e-25 118.2 88 63.6
SalBow6G4520 Salvia bowleyana HOM05D001568 ORTHO05D008804 8.0e-25 117.1 99 56.6
PSO017G1092 Papaver somniferum HOM05D001568 ORTHO05D008804 1.0e-24 116.7 101 56.4
PSO170G6576 Papaver somniferum HOM05D001568 ORTHO05D008804 1.0e-24 116.7 101 56.4
unitig_744.g24207 Utricularia gibba HOM05D001568 ORTHO05D008804 1.0e-24 116.7 99 58.6
Migut.B00460 Erythranthe guttata HOM05D001568 ORTHO05D008804 1.4e-24 116.3 101 56.4
CDE04G1257 Ceratophyllum demersum HOM05D001568 ORTHO05D008804 1.8e-24 115.9 98 58.2
Actinidia04394 Actinidia chinensis HOM05D001568 ORTHO05D008804 2.3e-24 115.5 93 62.4
ClCG02G007120 Citrullus lanatus HOM05D001568 ORTHO05D008804 1.2e-23 113.2 94 60.6
PGR142G1084 Punica granatum HOM05D001568 ORTHO05D008804 2.0e-23 112.5 102 56.9
DCAR_001738 Daucus carota HOM05D001568 ORTHO05D008804 2.6e-23 112.1 98 55.1
Sc14g0002500 Simmondsia chinensis HOM05D001568 ORTHO05D008804 2.6e-23 112.1 99 58.6
Sabra16G0181700 Salix brachista HOM05D001568 ORTHO05D008804 1.7e-22 109.4 83 62.7
ATR0739G203 Amborella trichopoda HOM05D001568 ORTHO05D008804 3.7e-22 108.2 98 55.1
Os03g0729700 Oryza sativa ssp. japonica HOM05D001568 ORTHO05D008804 3.7e-22 108.2 103 55.3
Lsat_1_v5_gn_9_113380 Lactuca sativa HOM05D001568 ORTHO05D008804 2.4e-21 105.5 97 57.7
COL.COLO4_32489 Corchorus olitorius HOM05D001568 ORTHO05D008804 2.0e-20 102.4 99 56.6
QL11p029473 Quercus lobata HOM05D001568 ORTHO05D008804 5.0e-19 97.8 155 37.4
HPP92_026588 Vanilla planifolia HOM05D001568 ORTHO05D008804 5.0e-19 97.8 99 48.5
vmacro22256 Vaccinium macrocarpon HOM05D001568 ORTHO05D009161 3.0e-16 88.6 117 42.7
AagrBONN_evm.TU.Sc2ySwM_362.475 Anthoceros agrestis HOM05D001568 ORTHO05D008804 2.0e-15 85.9 95 47.4
Dinv09541 Davidia involucrata HOM05D001568 ORTHO05D008804 2.0e-15 85.9 94 50.0
Manes.10G086502 Manihot esculenta HOM05D001568 ORTHO05D008804 2.0e-15 85.9 84 48.8
Gohir.D12G019200 Gossypium hirsutum HOM05D001568 ORTHO05D008804 3.7e-14 81.6 99 46.5
Mapoly0081s0053 Marchantia polymorpha HOM05D001568 ORTHO05D008804 3.2e-13 78.6 97 43.3
Rhsim05G0092200 Rhododendron simsii HOM05D001568 ORTHO05D004404 5.4e-13 77.8 102 42.2
RhsimUnG0183700 Rhododendron simsii HOM05D002338 ORTHO05D006706 5.4e-13 77.8 102 42.2
Ah.01g007020 Amaranthus hybridus HOM05D001568 ORTHO05D008804 6.0e-12 74.3 48 72.9
Pp3c3_17050 Physcomitrium patens HOM05D001568 ORTHO05D008804 6.0e-12 74.3 92 42.4
C05p34140 Brassica napus HOM05D001568 ORTHO05D019891 7.8e-12 73.9 59 62.7
BcaC05g27454 Brassica carinata HOM05D001568 ORTHO05D019891 1.3e-11 73.2 59 61.0
BcaC05g27456 Brassica carinata HOM05D001568 ORTHO05D019891 1.3e-11 73.2 59 61.0
CBR_g48696 Chara braunii HOM05D001568 ORTHO05D008804 1.3e-11 73.2 100 38.0
BolC5t32148H Brassica oleracea HOM05D058656 ORTHO05D019891 2.3e-11 72.4 51 68.6
SMO358G0428 Selaginella moellendorffii HOM05D001568 ORTHO05D008804 2.5e-10 68.9 102 41.2
Sed0001597 Sechium edule HOM05D001568 ORTHO05D008804 4.3e-10 68.2 56 55.4
MCO02G312 Micromonas commoda HOM05D001568 ORTHO05D008804 9.5e-10 67.0 104 36.5
Phvul.007G046900 Phaseolus vulgaris HOM05D001568 ORTHO05D008804 2.6e-07 58.9 53 56.6
Ah.01g007040 Amaranthus hybridus HOM05D001568 ORTHO05D008804 7.5e-07 57.4 53 52.8
Cre03.g175800 Chlamydomonas reinhardtii HOM05D001568 ORTHO05D008804 8.3e-06 53.9 44 59.1


User provided reference genes

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