Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10012172m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 2.7e-180 635.2 310 100.0
Thhalv10009430m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 9.7e-106 387.5 385 55.8
Thhalv10015953m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 1.4e-96 357.1 386 52.8
Thhalv10012024m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 1.5e-87 327.0 306 58.8
Thhalv10011940m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 1.8e-75 287.0 269 60.6
Thhalv10012236m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 8.0e-68 261.5 269 58.0
Sp1g18490 Schrenkiella parvula HOM05D007494 ORTHO05D009621 1.8e-67 260.4 384 41.4
AT1G20790 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 4.1e-56 222.6 352 40.9
Thhalv10012123m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 2.7e-55 219.9 204 60.3
AL1G33790 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 4.0e-51 206.1 399 34.8
BcaB07g30752 Brassica carinata HOM05D007494 ORTHO05D009621 6.8e-51 205.3 378 34.4
BcaC07g39053 Brassica carinata HOM05D007494 ORTHO05D009621 1.2e-50 204.5 378 34.1
A08p29250 Brassica napus HOM05D007494 ORTHO05D009621 1.5e-50 204.1 378 35.4
BcaB03g12853 Brassica carinata HOM05D007494 ORTHO05D009621 4.4e-50 202.6 378 34.4
AL5G30530 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 7.5e-50 201.8 401 36.4
BraA08t34860Z Brassica rapa HOM05D007494 ORTHO05D009621 9.8e-50 201.4 378 34.9
Carub.0001s2024 Capsella rubella HOM05D007494 ORTHO05D009621 1.7e-49 200.7 395 33.9
C08p20370 Brassica napus HOM05D007494 ORTHO05D009621 1.2e-47 194.5 378 33.1
BolC8t49665H Brassica oleracea HOM05D007494 ORTHO05D009621 1.2e-47 194.5 378 33.1
AL1G67140 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 1.3e-46 191.0 354 35.9
BcaB03g13899 Brassica carinata HOM05D007494 ORTHO05D009621 1.8e-43 180.6 380 33.4
BraA09t39811Z Brassica rapa HOM05D007494 ORTHO05D009621 4.0e-43 179.5 344 35.5
Thhalv10012136m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 3.4e-42 176.4 294 40.1
AT1G20940 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 7.0e-40 168.7 417 33.1
BcaC07g39504 Brassica carinata HOM05D007494 ORTHO05D009621 2.7e-39 166.8 344 34.0
C08p25490 Brassica napus HOM05D007494 ORTHO05D009621 2.7e-39 166.8 344 34.0
AT1G20795 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 6.0e-39 165.6 355 33.8
C08p25460 Brassica napus HOM05D007494 ORTHO05D009621 5.0e-38 162.5 339 33.0
Aa31LG7G4950 Aethionema arabicum HOM05D007494 ORTHO05D009621 8.6e-38 161.8 385 30.9
A09p43410 Brassica napus HOM05D007494 ORTHO05D009621 8.6e-38 161.8 381 31.8
Thhalv10011090m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 3.3e-37 159.8 364 32.4
BraA09t39810Z Brassica rapa HOM05D007494 ORTHO05D009621 7.3e-37 158.7 381 31.2
AL1G33970 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 1.2e-36 157.9 341 35.5
THA.LOC104813281 Tarenaya hassleriana HOM05D007494 ORTHO05D009621 2.8e-36 156.8 371 30.5
AL1G45220 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 3.6e-36 156.4 368 32.6
C08p25440 Brassica napus HOM05D007494 ORTHO05D009621 2.3e-35 153.7 399 29.8
BcaB01g00617 Brassica carinata HOM05D007494 ORTHO05D009621 5.2e-35 152.5 363 30.9
AL1G33230 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 1.5e-34 151.0 383 35.5
BcaC07g39499 Brassica carinata HOM05D007494 ORTHO05D009621 2.0e-34 150.6 391 29.9
Aa31LG7G4960 Aethionema arabicum HOM05D007494 ORTHO05D009621 1.3e-33 147.9 382 28.8
AT1G20800 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 1.7e-33 147.5 294 33.7
AT1G57580 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 1.7e-33 147.5 395 30.1
Carub.0001s2025 Capsella rubella HOM05D007494 ORTHO05D009621 2.9e-33 146.7 341 32.3
AT1G20735 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 3.7e-33 146.4 382 34.0
BcaB02g08200 Brassica carinata HOM05D007494 ORTHO05D009621 1.9e-32 144.1 314 33.1
A03p18740 Brassica napus HOM05D007494 ORTHO05D009621 1.9e-32 144.1 349 35.0
C08p21040 Brassica napus HOM05D007494 ORTHO05D009621 1.2e-31 141.4 346 32.7
BraA03t11134Z Brassica rapa HOM05D007494 ORTHO05D009621 1.2e-31 141.4 346 34.7
A09p43390 Brassica napus HOM05D007494 ORTHO05D009621 7.8e-31 138.7 247 35.6
BolC8t49740H Brassica oleracea HOM05D007494 ORTHO05D009621 1.7e-30 137.5 346 32.7
BcaC07g39120 Brassica carinata HOM05D007494 ORTHO05D009621 2.3e-30 137.1 349 32.7
Carub.0001s2057 Capsella rubella HOM05D007494 ORTHO05D009621 3.0e-30 136.7 392 31.1
AT1G20240 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 5.1e-30 136.0 258 38.0
Carub.0005s1178 Capsella rubella HOM05D007494 ORTHO05D009621 6.6e-30 135.6 239 38.9
BcaB03g11879 Brassica carinata HOM05D007494 ORTHO05D009621 1.2e-28 131.3 324 33.6
BraA08t34811Z Brassica rapa HOM05D007494 ORTHO05D009621 4.7e-28 129.4 234 39.7
A08p28830 Brassica napus HOM05D007494 ORTHO05D009621 1.8e-27 127.5 234 39.3
BolC8t49745H Brassica oleracea HOM05D007494 ORTHO05D009621 4.0e-27 126.3 314 33.4
AT1G57565 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 8.9e-27 125.2 196 36.2
BcaB03g12780 Brassica carinata HOM05D007494 ORTHO05D009621 2.0e-26 124.0 353 31.7
BolC8t50168H Brassica oleracea HOM05D007494 ORTHO05D009621 4.4e-26 122.9 289 31.1
Sp5g11780 Schrenkiella parvula HOM05D007494 ORTHO05D009621 4.4e-26 122.9 283 34.3
AT1G20690 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 2.9e-25 120.2 220 36.4
THA.LOC104813247 Tarenaya hassleriana HOM05D007494 ORTHO05D009621 2.9e-25 120.2 356 30.6
AT1G20360 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 6.4e-25 119.0 301 35.5
Carub.0004s0895 Capsella rubella HOM05D007494 ORTHO05D009621 3.2e-24 116.7 230 38.3
Aa31LG8G15370 Aethionema arabicum HOM05D007494 ORTHO05D009621 1.6e-23 114.4 323 26.6
Aa31LG8G15360 Aethionema arabicum HOM05D007494 ORTHO05D009621 2.7e-23 113.6 306 28.4
CARHR020740 Cardamine hirsuta HOM05D007494 ORTHO05D009621 3.0e-22 110.2 224 35.7
BcaC07g39500 Brassica carinata HOM05D007494 ORTHO05D009621 6.6e-22 109.0 155 38.1
AL1G33090 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 1.2e-20 104.8 190 40.5
Carub.0001s1977 Capsella rubella HOM05D007494 ORTHO05D009621 1.2e-20 104.8 276 34.4
THA.LOC104813248 Tarenaya hassleriana HOM05D007494 ORTHO05D009621 1.1e-19 101.7 239 30.1
BcaC07g39114 Brassica carinata HOM05D007494 ORTHO05D009621 4.0e-19 99.8 263 33.1
BcaB01g00618 Brassica carinata HOM05D007494 ORTHO05D009621 2.6e-18 97.1 177 36.2
Sp1g18390 Schrenkiella parvula HOM05D007494 ORTHO05D009621 5.8e-18 95.9 158 39.9
BolC8t50169H Brassica oleracea HOM05D007494 ORTHO05D009621 2.2e-17 94.0 156 39.1
C08p21030 Brassica napus HOM05D007494 ORTHO05D009621 4.9e-17 92.8 256 30.5
A09p43460 Brassica napus HOM05D007494 ORTHO05D009621 1.3e-14 84.7 219 29.2
BolC8t50166H Brassica oleracea HOM05D007494 ORTHO05D009621 2.1e-12 77.4 255 28.2
AT1G20290 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 6.9e-11 72.4 130 38.5
BcaC07g39502 Brassica carinata HOM05D007494 ORTHO05D009621 3.4e-10 70.1 103 38.8
C08p25470 Brassica napus HOM05D007494 ORTHO05D009621 3.4e-10 70.1 103 38.8
A09p43420 Brassica napus HOM05D007494 ORTHO05D009621 9.9e-10 68.6 94 39.4
Aa31LG8G15320 Aethionema arabicum HOM05D007494 ORTHO05D009621 4.9e-09 66.2 78 35.9
BraA09t39809Z Brassica rapa HOM05D007494 ORTHO05D009621 4.6e-07 59.7 95 33.7
Aa31LG8G15340 Aethionema arabicum HOM05D007494 ORTHO05D009621 1.3e-06 58.2 54 53.7
AL1G32830 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 1.3e-06 58.2 61 54.1
AL1G33800 Arabidopsis lyrata HOM05D013746 ORTHO05D015945 8.7e-06 55.5 45 60.0


User provided reference genes

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