Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10012149m.g Eutrema salsugineum HOM05D007184 ORTHO05D008987 5.7e-62 240.7 122 100.0
Thhalv10011779m.g Eutrema salsugineum HOM05D007184 ORTHO05D008987 2.1e-48 195.7 131 80.9
Sp1g37830 Schrenkiella parvula HOM05D007184 ORTHO05D008987 4.9e-45 184.5 131 77.1
A06p02680 Brassica napus HOM05D007184 ORTHO05D008987 2.5e-41 172.2 133 70.7
BcaC08g43280 Brassica carinata HOM05D007184 ORTHO05D008987 4.3e-41 171.4 134 71.6
C06p06300 Brassica napus HOM05D007184 ORTHO05D008987 4.3e-41 171.4 134 71.6
BolC6t35739H Brassica oleracea HOM05D007184 ORTHO05D008987 4.3e-41 171.4 134 71.6
BraA06t23477Z Brassica rapa HOM05D007184 ORTHO05D008987 5.6e-41 171.0 133 69.9
BcaB07g33555 Brassica carinata HOM05D007184 ORTHO05D008987 2.8e-40 168.7 133 72.2
BcaB07g33556 Brassica carinata HOM05D007184 ORTHO05D008987 2.8e-40 168.7 133 72.2
Carub.0001s4001 Capsella rubella HOM05D007184 ORTHO05D008987 1.3e-37 159.8 130 70.8
CARHR041120 Cardamine hirsuta HOM05D007184 ORTHO05D008987 1.3e-37 159.8 127 70.1
AL1G58900 Arabidopsis lyrata HOM05D007184 ORTHO05D008987 2.9e-37 158.7 130 69.2
AT1G51100 Arabidopsis thaliana HOM05D007184 ORTHO05D008987 8.3e-37 157.1 137 67.9
Aa31LG10G3410 Aethionema arabicum HOM05D006358 ORTHO05D008185 1.2e-35 153.3 131 66.4
THA.LOC104817896 Tarenaya hassleriana HOM05D007184 ORTHO05D008987 7.6e-30 134.0 142 56.3
AUR62020554 Chenopodium quinoa HOM05D007184 ORTHO05D008987 2.7e-27 125.6 80 76.2
AUR62015645 Chenopodium quinoa HOM05D007184 ORTHO05D008987 6.0e-27 124.4 80 75.0
EL10Ac4g07971 Beta vulgaris HOM05D007184 ORTHO05D008987 3.9e-26 121.7 80 73.8
RcHm_v2.0_Chr4g0410121 Rosa chinensis HOM05D007184 ORTHO05D008987 1.9e-25 119.4 81 72.8
RcHm_v2.0_Chr5g0037571 Rosa chinensis HOM05D007184 ORTHO05D008987 1.9e-25 119.4 81 72.8
FvH4_3g21830 Fragaria vesca HOM05D007184 ORTHO05D008987 5.6e-25 117.9 81 71.6
FAN11G2616 Fragaria x ananassa HOM05D007184 ORTHO05D008987 5.6e-25 117.9 81 71.6
FAN21G0378 Fragaria x ananassa HOM05D007184 ORTHO05D008987 5.6e-25 117.9 81 71.6
FAN25G3727 Fragaria x ananassa HOM05D007184 ORTHO05D008987 7.3e-25 117.5 81 71.6
Nitab4.5_0000397g0060 Nicotiana tabacum HOM05D007184 ORTHO05D008987 7.3e-25 117.5 81 74.1
Nitab4.5_0009192g0030 Nicotiana tabacum HOM05D007184 ORTHO05D008987 7.3e-25 117.5 81 74.1
Prupe.4G202500 Prunus persica HOM05D007184 ORTHO05D008987 9.6e-25 117.1 80 71.2
Gohir.A13G141300 Gossypium hirsutum HOM05D007184 ORTHO05D008987 1.3e-24 116.7 80 75.0
CSS0032425 Camellia sinensis var. sinensis HOM05D007184 ORTHO05D008987 1.6e-24 116.3 80 73.8
CSS0036378 Camellia sinensis var. sinensis HOM05D007184 ORTHO05D008987 1.6e-24 116.3 80 73.8
Thecc.07G052800 Theobroma cacao HOM05D007184 ORTHO05D008987 1.6e-24 116.3 80 75.0
Gohir.D13G146000 Gossypium hirsutum HOM05D007184 ORTHO05D008987 2.8e-24 115.5 80 73.8
Gorai.013G163800 Gossypium raimondii HOM05D007184 ORTHO05D008987 3.6e-24 115.2 80 73.8
Cc05_g13240 Coffea canephora HOM05D007184 ORTHO05D008987 8.1e-24 114.0 104 60.6
Ciclev10009433m.g Citrus clementina HOM05D007184 ORTHO05D008987 1.4e-23 113.2 80 67.5
COL.COLO4_09571 Corchorus olitorius HOM05D007184 ORTHO05D008987 1.4e-23 113.2 121 57.9
MD03G1211500 Malus domestica HOM05D007184 ORTHO05D008987 1.4e-23 113.2 80 68.8
HanXRQChr05g0159221 Helianthus annuus HOM05D007184 ORTHO05D008987 1.8e-23 112.8 78 71.8
Hma1.2p1_1869F.1_g306030 Hydrangea macrophylla HOM05D007184 ORTHO05D008987 2.4e-23 112.5 79 72.2
Lalb_Chr14g0366141 Lupinus albus HOM05D007184 ORTHO05D008987 2.4e-23 112.5 87 66.7
MELO3C016627.2 Cucumis melo HOM05D007184 ORTHO05D008987 4.0e-23 111.7 118 56.8
unitig_52.g17357 Utricularia gibba HOM05D007184 ORTHO05D008987 5.3e-23 111.3 77 71.4
Peaxi162Scf01086g00015 Petunia axillaris HOM05D007184 ORTHO05D008987 6.9e-23 110.9 81 70.4
Cfa020415 Carpinus fangiana HOM05D007184 ORTHO05D008987 1.2e-22 110.2 80 70.0
Duzib268G1070 Durio zibethinus HOM05D007184 ORTHO05D008987 1.2e-22 110.2 80 72.5
Lsat_1_v5_gn_5_5700 Lactuca sativa HOM05D003993 ORTHO05D005336 1.5e-22 109.8 79 68.4
SalBow7G0016 Salvia bowleyana HOM05D007184 ORTHO05D008987 1.5e-22 109.8 84 66.7
Oeu062614.1 Olea europaea HOM05D007184 ORTHO05D008987 2.6e-22 109.0 79 72.2
Haze_09610 Corylus avellana HOM05D007184 ORTHO05D008987 4.4e-22 108.2 80 68.8
GSVIVG01014606001 Vitis vinifera HOM05D007184 ORTHO05D008987 4.4e-22 108.2 79 69.6
Atru.BG.150.p Acer truncatum HOM05D007184 ORTHO05D008987 7.6e-22 107.5 80 66.2
Glyma.13G287300 Glycine max HOM05D007184 ORTHO05D008987 9.9e-22 107.1 79 65.8
VMungo1080G0323 Vigna mungo HOM05D007184 ORTHO05D008987 1.3e-21 106.7 80 66.2
ClCG10G005800 Citrullus lanatus HOM05D007184 ORTHO05D008987 1.7e-21 106.3 80 66.2
Migut.H01857 Erythranthe guttata HOM05D007184 ORTHO05D008987 1.7e-21 106.3 79 69.6
Glyma.12G214300 Glycine max HOM05D007184 ORTHO05D008987 1.7e-21 106.3 79 65.8
CiPaw.11G183700 Carya illinoinensis HOM05D007184 ORTHO05D008987 2.2e-21 105.9 68 75.0
CsaV3_3G005480 Cucumis sativus L. HOM05D007184 ORTHO05D008987 2.2e-21 105.9 118 54.2
ECA246G2094 Erigeron canadensis HOM05D003993 ORTHO05D005336 2.2e-21 105.9 79 64.6
PGR031G2970 Punica granatum HOM05D007184 ORTHO05D008987 2.2e-21 105.9 78 69.2
EL10Ac1g02068 Beta vulgaris HOM05D007184 ORTHO05D008987 3.8e-21 105.1 71 71.8
CANSAT11G2419 Cannabis sativa HOM05D007184 ORTHO05D008987 4.9e-21 104.8 79 67.1
Nn1g03662 Nelumbo nucifera HOM05D007184 ORTHO05D008987 4.9e-21 104.8 67 74.6
Phvul.005G091600 Phaseolus vulgaris HOM05D007184 ORTHO05D008987 4.9e-21 104.8 80 65.0
TAR624G0273 Trochodendron aralioides HOM05D007184 ORTHO05D008987 6.4e-21 104.4 83 65.1
Aqoxy4G02072 Aquilegia oxysepala HOM05D007184 ORTHO05D008987 8.4e-21 104.0 87 60.9
Solyc07g064100.1 Solanum lycopersicum HOM05D007184 ORTHO05D008987 1.4e-20 103.2 77 68.8
Sopen07g032240 Solanum pennellii HOM05D007184 ORTHO05D008987 1.4e-20 103.2 77 68.8
PGSC0003DMG400019260 Solanum tuberosum HOM05D007184 ORTHO05D008987 1.4e-20 103.2 77 68.8
Medtr2g082930 Medicago truncatula HOM05D007184 ORTHO05D008987 1.9e-20 102.8 81 65.4
Cpa.g.sc97.69 Carica papaya HOM05D007184 ORTHO05D008987 2.4e-20 102.4 69 72.5
Lj3g0025244 Lotus japonicus HOM05D007184 ORTHO05D008987 2.4e-20 102.4 80 65.0
Psat5g251800 Pisum sativum HOM05D007184 ORTHO05D008987 7.1e-20 100.9 116 52.6
QL08p013337 Quercus lobata HOM05D007184 ORTHO05D008987 9.3e-20 100.5 75 64.0
TPR.G36807 Trifolium pratense HOM05D007184 ORTHO05D008987 9.3e-20 100.5 107 54.2
Manes.03G122800 Manihot esculenta HOM05D007184 ORTHO05D008987 1.2e-19 100.1 79 62.0
QL08p013467 Quercus lobata HOM05D007184 ORTHO05D008987 1.2e-19 100.1 125 45.6
TWI38G1172 Tripterygium wilfordii HOM05D007184 ORTHO05D008987 2.1e-19 99.4 142 43.7
ClCG03G004100 Citrullus lanatus HOM05D007184 ORTHO05D008987 3.5e-19 98.6 80 63.8
QL08p013286 Quercus lobata HOM05D007184 ORTHO05D008987 1.0e-18 97.1 75 61.3
Lj1P863T33 Lonicera japonica HOM05D007184 ORTHO05D008987 3.9e-18 95.1 78 62.8
PSO675G5359 Papaver somniferum HOM05D007184 ORTHO05D008987 3.9e-18 95.1 91 58.2
Potri.011G132900 Populus trichocarpa HOM05D007184 ORTHO05D008987 3.9e-18 95.1 79 64.6
PSO541G2827 Papaver somniferum HOM05D007184 ORTHO05D008987 5.1e-18 94.7 91 58.2
Sabra11G0119700 Salix brachista HOM05D007184 ORTHO05D008987 5.1e-18 94.7 72 66.7
Ca_01753_v3 Cicer arietinum L. HOM05D007184 ORTHO05D008987 1.9e-17 92.8 81 63.0
Sed0004555 Sechium edule HOM05D007184 ORTHO05D008987 4.3e-17 91.7 81 60.5
CDE11G0483 Ceratophyllum demersum HOM05D007184 ORTHO05D008987 5.6e-17 91.3 76 60.5
arahy.Tifrunner.gnm1.ann1.538Z4G Arachis hypogaea HOM05D007184 ORTHO05D008987 3.6e-16 88.6 92 55.4
CDE05G0960 Ceratophyllum demersum HOM05D007184 ORTHO05D008987 1.2e-14 83.6 50 76.0
MBI12_g14496_MAGBIO Magnolia biondii HOM05D007184 ORTHO05D008987 4.5e-14 81.6 120 41.7
ATR0073G001 Amborella trichopoda HOM05D007184 ORTHO05D008987 8.4e-13 77.4 78 50.0
Os01g0676200 Oryza sativa ssp. japonica HOM05D007184 ORTHO05D008987 9.3e-12 73.9 74 51.4
Zm00001eb156870 Zea mays HOM05D007184 ORTHO05D008987 4.6e-11 71.6 83 47.0
Eucgr.F03426 Eucalyptus grandis HOM05D007184 ORTHO05D008987 6.2e-08 61.2 38 68.4


User provided reference genes

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