Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10011976m.g Eutrema salsugineum HOM05D010922 ORTHO05D011067 6.1e-82 307.8 194 100.0
Sp1g37670 Schrenkiella parvula HOM05D010922 ORTHO05D011067 1.4e-65 253.4 198 74.7
AL1G58650 Arabidopsis lyrata HOM05D010922 ORTHO05D011067 1.5e-64 250.0 198 80.3
AT1G50930 Arabidopsis thaliana HOM05D010922 ORTHO05D011067 9.8e-64 247.3 199 79.9
CARHR040970 Cardamine hirsuta HOM05D010922 ORTHO05D011067 4.5e-61 238.4 199 76.4
Carub.0001s3987 Capsella rubella HOM05D010922 ORTHO05D011067 2.4e-54 216.1 199 72.9
BcaB02g11196 Brassica carinata HOM05D010922 ORTHO05D011067 1.3e-52 210.3 200 69.5
BcaB02g11197 Brassica carinata HOM05D010922 ORTHO05D011067 1.3e-52 210.3 200 69.5
BcaC05g27377 Brassica carinata HOM05D010922 ORTHO05D011067 2.3e-52 209.5 199 68.3
C05p33110 Brassica napus HOM05D010922 ORTHO05D011067 8.6e-52 207.6 199 71.9
BolC5t32043H Brassica oleracea HOM05D010922 ORTHO05D011067 8.6e-52 207.6 199 71.9
A05p19850 Brassica napus HOM05D010922 ORTHO05D011067 2.3e-49 199.5 200 66.5
BraA05t20890Z Brassica rapa HOM05D010922 ORTHO05D011067 2.3e-49 199.5 200 66.5
BcaB07g33533 Brassica carinata HOM05D010922 ORTHO05D011067 1.5e-48 196.8 194 70.6
A06p02810 Brassica napus HOM05D010922 ORTHO05D011067 1.7e-47 193.4 194 68.6
BraA06t23488Z Brassica rapa HOM05D010922 ORTHO05D011067 5.4e-46 188.3 194 63.9
C06p06090 Brassica napus HOM05D010922 ORTHO05D011067 7.3e-43 177.9 194 61.9
BolC6t35722H Brassica oleracea HOM05D010922 ORTHO05D011067 7.3e-43 177.9 194 61.9
BcaC09g50965 Brassica carinata HOM05D010509 ORTHO05D011067 2.4e-17 93.2 196 39.8
C01p18680 Brassica napus HOM05D010509 ORTHO05D011067 1.7e-15 87.0 197 39.1
BolC1t01796H Brassica oleracea HOM05D010509 ORTHO05D011067 1.7e-15 87.0 197 39.1
CARHR096340 Cardamine hirsuta HOM05D010509 ORTHO05D011067 4.9e-15 85.5 199 37.2
BcaB04g20646 Brassica carinata HOM05D010509 ORTHO05D011067 8.4e-15 84.7 197 37.6
A01p34240 Brassica napus HOM05D010509 ORTHO05D011067 1.1e-14 84.3 197 38.6
BraA01t03523Z Brassica rapa HOM05D010509 ORTHO05D011067 1.1e-14 84.3 197 38.6
Sp3g18570 Schrenkiella parvula HOM05D010509 ORTHO05D011067 1.4e-14 84.0 198 38.4
AT3G20557 Arabidopsis thaliana HOM05D010509 ORTHO05D011067 4.2e-14 82.4 197 38.6
C01p43630 Brassica napus HOM05D010509 ORTHO05D011067 5.4e-14 82.0 197 37.6
BolC1t04323H Brassica oleracea HOM05D010509 ORTHO05D011067 5.4e-14 82.0 197 37.6
BcaC05g28316 Brassica carinata HOM05D010509 ORTHO05D011067 9.3e-14 81.3 196 37.2
BcaC09g49001 Brassica carinata HOM05D010509 ORTHO05D011067 1.2e-13 80.9 197 37.6
Carub.0003s2053 Capsella rubella HOM05D010509 ORTHO05D011067 3.5e-13 79.3 194 34.0
A05p28290 Brassica napus HOM05D010509 ORTHO05D011067 2.3e-12 76.6 196 36.7
BolC5t33093H Brassica oleracea HOM05D010509 ORTHO05D011067 2.3e-12 76.6 196 36.7
BraA05t21711Z Brassica rapa HOM05D010509 ORTHO05D011067 2.3e-12 76.6 196 36.7
C05p43770 Brassica napus HOM05D010509 ORTHO05D011067 1.5e-11 73.9 196 36.2
AT5G54790 Arabidopsis thaliana HOM05D010845 ORTHO05D002692 4.3e-11 72.4 194 28.9
AL3G34410 Arabidopsis lyrata HOM05D010509 ORTHO05D011067 2.1e-10 70.1 195 33.8
AL8G30220 Arabidopsis lyrata HOM05D010845 ORTHO05D002692 1.8e-09 67.0 194 28.9
A10p12040 Brassica napus HOM05D010845 ORTHO05D002692 5.3e-09 65.5 196 29.1
BolC2t07773H Brassica oleracea HOM05D010845 ORTHO05D002692 6.9e-09 65.1 194 28.4
BcaC03g14288 Brassica carinata HOM05D010845 ORTHO05D002692 2.0e-08 63.5 194 28.4
Carub.0008s1506 Capsella rubella HOM05D010845 ORTHO05D002692 2.0e-08 63.5 200 30.5
CARHR268130 Cardamine hirsuta HOM05D010845 ORTHO05D002692 9.9e-08 61.2 195 28.2
A02p10030 Brassica napus HOM05D010845 ORTHO05D002692 2.2e-07 60.1 194 27.3
THA.LOC104816923 Tarenaya hassleriana HOM05D010922 ORTHO05D011067 2.2e-07 60.1 198 30.8
BraA02t06071Z Brassica rapa HOM05D010845 ORTHO05D002692 6.4e-07 58.5 194 26.8
Sp6g16730 Schrenkiella parvula HOM05D010845 ORTHO05D002692 6.4e-07 58.5 194 27.3
BcaB05g22158 Brassica carinata HOM05D010845 ORTHO05D002692 8.4e-07 58.2 194 26.3
Thhalv10015916m.g Eutrema salsugineum HOM05D010845 ORTHO05D002692 1.4e-06 57.4 194 26.8
BcaB08g35844 Brassica carinata HOM05D010845 ORTHO05D002692 7.1e-06 55.1 190 26.3


User provided reference genes

Program Settings