Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10011878m.g Eutrema salsugineum HOM05D007591 ORTHO05D009564 4.6e-53 211.1 115 100.0
CARHR134910 Cardamine hirsuta HOM05D007591 ORTHO05D009564 7.6e-40 167.2 118 81.4
Carub.0001s3401 Capsella rubella HOM05D007591 ORTHO05D009564 1.7e-39 166.0 118 78.8
SpUn0008_0030 Schrenkiella parvula HOM05D007591 ORTHO05D009564 8.4e-39 163.7 116 81.9
Aa31LG6G9200 Aethionema arabicum HOM05D007591 ORTHO05D009564 1.1e-38 163.3 124 71.0
AL4G17330 Arabidopsis lyrata HOM05D007591 ORTHO05D009564 1.2e-37 159.8 117 81.2
A04p11310 Brassica napus HOM05D007591 ORTHO05D009564 6.0e-37 157.5 122 77.0
BraA04t16792Z Brassica rapa HOM05D007591 ORTHO05D009564 6.0e-37 157.5 122 77.0
BcaB06g27212 Brassica carinata HOM05D007591 ORTHO05D009564 2.3e-36 155.6 120 77.5
AT2G25720 Arabidopsis thaliana HOM05D007591 ORTHO05D009564 4.3e-35 151.4 120 76.7
C04p45070 Brassica napus HOM05D007591 ORTHO05D009564 5.6e-35 151.0 115 73.9
BolC4t26085H Brassica oleracea HOM05D007591 ORTHO05D009564 5.6e-35 151.0 115 73.9
THA.LOC104817210 Tarenaya hassleriana HOM05D007591 ORTHO05D009564 4.2e-30 134.8 125 66.4
MSTRG.23207 Avicennia marina HOM05D007591 ORTHO05D009564 3.9e-28 128.3 116 60.3
Gohir.D02G024000 Gossypium hirsutum HOM05D007591 ORTHO05D009564 6.7e-28 127.5 118 61.9
Gorai.005G030000 Gossypium raimondii HOM05D007591 ORTHO05D009564 6.7e-28 127.5 118 61.9
CAN.G1909.5 Capsicum annuum HOM05D007591 ORTHO05D009564 8.7e-28 127.1 118 64.4
Nn3g18513 Nelumbo nucifera HOM05D007591 ORTHO05D009564 8.7e-28 127.1 117 65.8
Duzib091G0002 Durio zibethinus HOM05D007591 ORTHO05D009564 3.3e-27 125.2 122 62.3
Gohir.A02G020402 Gossypium hirsutum HOM05D007591 ORTHO05D009564 3.3e-27 125.2 116 62.1
Nitab4.5_0001180g0270 Nicotiana tabacum HOM05D007591 ORTHO05D009564 3.3e-27 125.2 120 62.5
Nitab4.5_0004612g0010 Nicotiana tabacum HOM05D007591 ORTHO05D009564 9.6e-27 123.6 119 62.2
Peaxi162Scf00171g00034 Petunia axillaris HOM05D007591 ORTHO05D009564 9.6e-27 123.6 126 59.5
Oeu001600.1 Olea europaea HOM05D007591 ORTHO05D009564 1.3e-26 123.2 116 62.1
PGR083G0752 Punica granatum HOM05D007591 ORTHO05D009564 2.1e-26 122.5 122 63.9
Thecc.04G198100 Theobroma cacao HOM05D007591 ORTHO05D009564 2.1e-26 122.5 116 64.7
Sc10g0009060 Simmondsia chinensis HOM05D007591 ORTHO05D009564 3.7e-26 121.7 113 64.6
TAR622G1019 Trochodendron aralioides HOM05D007591 ORTHO05D009564 6.3e-26 120.9 122 62.3
Migut.O00251 Erythranthe guttata HOM05D007591 ORTHO05D009564 8.2e-26 120.6 116 62.1
Potri.004G068400 Populus trichocarpa HOM05D007591 ORTHO05D009564 1.1e-25 120.2 116 58.6
Psat0s3092g0040 Pisum sativum HOM05D007591 ORTHO05D009564 1.4e-25 119.8 127 60.6
Sopen03g029150 Solanum pennellii HOM05D007591 ORTHO05D009564 1.4e-25 119.8 118 61.0
SalBow5G5001 Salvia bowleyana HOM05D007591 ORTHO05D009564 1.8e-25 119.4 115 60.9
Solyc03g098410.1 Solanum lycopersicum HOM05D007591 ORTHO05D009564 1.8e-25 119.4 118 60.2
Actinidia35144 Actinidia chinensis HOM05D007591 ORTHO05D009564 2.4e-25 119.0 128 54.7
Haze_18422 Corylus avellana HOM05D007591 ORTHO05D009564 2.4e-25 119.0 128 58.6
PGSC0003DMG400010159 Solanum tuberosum HOM05D007591 ORTHO05D009564 3.1e-25 118.6 118 60.2
TWI15G0768 Tripterygium wilfordii HOM05D007591 ORTHO05D009564 4.1e-25 118.2 125 59.2
HPP92_005097 Vanilla planifolia HOM05D007591 ORTHO05D009564 5.3e-25 117.9 120 60.0
CiPaw.16G070000 Carya illinoinensis HOM05D007591 ORTHO05D009564 9.0e-25 117.1 127 57.5
MBI06_g28831_MAGBIO Magnolia biondii HOM05D007591 ORTHO05D009564 9.0e-25 117.1 119 63.0
PSO063G6315 Papaver somniferum HOM05D007591 ORTHO05D009564 1.2e-24 116.7 129 59.7
Cpa.g.sc36.38 Carica papaya HOM05D007591 ORTHO05D009564 1.5e-24 116.3 118 62.7
DCAR_014000 Daucus carota HOM05D007591 ORTHO05D009564 1.5e-24 116.3 120 62.5
Lalb_Chr05g0221361 Lupinus albus HOM05D007591 ORTHO05D009564 1.5e-24 116.3 130 60.8
Sabra04G0046100 Salix brachista HOM05D007591 ORTHO05D009564 2.0e-24 115.9 113 58.4
Dinv01404 Davidia involucrata HOM05D007591 ORTHO05D009564 2.6e-24 115.5 129 55.0
FAN04G1638 Fragaria x ananassa HOM05D007591 ORTHO05D009564 2.6e-24 115.5 118 63.6
Ca_25920_v3 Cicer arietinum L. HOM05D007591 ORTHO05D009564 3.4e-24 115.2 119 59.7
arahy.Tifrunner.gnm1.ann1.T0CPW9 Arachis hypogaea HOM05D007591 ORTHO05D009564 1.3e-23 113.2 117 59.0
CsaV3_1G005150 Cucumis sativus L. HOM05D007591 ORTHO05D009564 1.3e-23 113.2 120 60.8
HanXRQChr17g0560331 Helianthus annuus HOM05D007591 ORTHO05D009564 1.3e-23 113.2 125 58.4
Prupe.5G241900 Prunus persica HOM05D007591 ORTHO05D009564 1.3e-23 113.2 127 59.1
Cc04_g08740 Coffea canephora HOM05D007591 ORTHO05D009564 1.7e-23 112.8 118 61.0
Phvul.002G333300 Phaseolus vulgaris HOM05D007591 ORTHO05D009564 1.7e-23 112.8 137 56.2
FAN13G0294 Fragaria x ananassa HOM05D007591 ORTHO05D009564 2.2e-23 112.5 121 61.2
Glyma.08G057500 Glycine max HOM05D007591 ORTHO05D009564 2.2e-23 112.5 130 56.9
SHI12607 Sapria himalayana HOM05D007591 ORTHO05D009564 2.2e-23 112.5 116 54.3
QL07p035218 Quercus lobata HOM05D007591 ORTHO05D009564 2.9e-23 112.1 127 53.5
COL.COLO4_20200 Corchorus olitorius HOM05D007591 ORTHO05D009564 5.0e-23 111.3 117 61.5
ECA234G2981 Erigeron canadensis HOM05D007591 ORTHO05D009564 6.5e-23 110.9 126 57.9
FvH4_5g18200 Fragaria vesca HOM05D007591 ORTHO05D009564 8.4e-23 110.5 128 57.8
EL10Ac8g19512 Beta vulgaris HOM05D007591 ORTHO05D009564 1.1e-22 110.2 120 60.8
Aqoxy3G04178 Aquilegia oxysepala HOM05D007591 ORTHO05D009564 1.9e-22 109.4 122 60.7
Medtr6g036570 Medicago truncatula HOM05D007591 ORTHO05D009564 1.9e-22 109.4 129 57.4
RcHm_v2.0_Chr7g0177391 Rosa chinensis HOM05D007591 ORTHO05D009564 3.2e-22 108.6 135 57.8
MELO3C001953.2 Cucumis melo HOM05D007591 ORTHO05D009564 4.2e-22 108.2 119 58.8
Ciclev10022902m.g Citrus clementina HOM05D007591 ORTHO05D009564 7.2e-22 107.5 121 59.5
SpUn0123_0020 Schrenkiella parvula HOM05D007591 ORTHO05D009564 7.2e-22 107.5 68 83.8
Manes.02G219300 Manihot esculenta HOM05D007591 ORTHO05D009564 1.2e-21 106.7 119 58.0
FAN18G3921 Fragaria x ananassa HOM05D007591 ORTHO05D009564 1.6e-21 106.3 130 51.5
ClCG04G012550 Citrullus lanatus HOM05D007591 ORTHO05D009564 2.7e-21 105.5 117 58.1
Hma1.2p1_1404F.1_g281340 Hydrangea macrophylla HOM05D007591 ORTHO05D009564 2.7e-21 105.5 127 55.9
Eucgr.H00568 Eucalyptus grandis HOM05D007591 ORTHO05D009564 4.6e-21 104.8 135 51.9
LjContig00484g0016765 Lotus japonicus HOM05D007591 ORTHO05D009564 4.6e-21 104.8 128 55.5
ATR0807G077 Amborella trichopoda HOM05D007591 ORTHO05D009564 6.1e-21 104.4 126 52.4
Sed0023620 Sechium edule HOM05D007591 ORTHO05D009564 6.1e-21 104.4 124 57.3
Atru.chr9.1591 Acer truncatum HOM05D007591 ORTHO05D009564 7.9e-21 104.0 130 55.4
Lsat_1_v5_gn_4_52441 Lactuca sativa HOM05D007591 ORTHO05D009564 1.0e-20 103.6 130 53.8
Ah.09g232230 Amaranthus hybridus HOM05D007591 ORTHO05D009564 1.3e-20 103.2 126 58.7
CSS0020209 Camellia sinensis var. sinensis HOM05D007591 ORTHO05D009564 3.9e-20 101.7 133 54.1
arahy.Tifrunner.gnm1.ann1.B1XHC0 Arachis hypogaea HOM05D007591 ORTHO05D009564 6.7e-20 100.9 119 56.3
MD14G1244400 Malus domestica HOM05D007591 ORTHO05D009564 1.5e-19 99.8 126 54.0
unitig_22.g5435 Utricularia gibba HOM05D007591 ORTHO05D009564 7.4e-19 97.4 106 58.5
Rhsim12G0136500 Rhododendron simsii HOM05D007591 ORTHO05D009564 1.3e-18 96.7 126 51.6
SEGI_35599 Sequoiadendron giganteum HOM05D007591 ORTHO05D009564 1.6e-18 96.3 115 48.7
AUR62008565 Chenopodium quinoa HOM05D007591 ORTHO05D009564 3.7e-18 95.1 117 51.3
AUR62033202 Chenopodium quinoa HOM05D007591 ORTHO05D009564 1.1e-17 93.6 117 50.4
Zm00001eb429080 Zea mays HOM05D007591 ORTHO05D009564 6.9e-17 90.9 133 45.9
CDE07G1474 Ceratophyllum demersum HOM05D007591 ORTHO05D009564 2.0e-16 89.4 98 56.1
Pp3c23_22030 Physcomitrium patens HOM05D007591 ORTHO05D009564 1.0e-15 87.0 117 51.3
THA.LOC104813140 Tarenaya hassleriana HOM05D007591 ORTHO05D009564 2.2e-15 85.9 110 50.9
Mapoly0020s0124 Marchantia polymorpha HOM05D007591 ORTHO05D009564 7.2e-14 80.9 133 40.6
CAN.G1909.8 Capsicum annuum HOM05D007591 ORTHO05D009564 6.7e-12 74.3 76 50.0
Medtr6g036573 Medicago truncatula HOM05D007591 ORTHO05D009564 7.4e-11 70.9 41 78.0
CBR_g12703 Chara braunii HOM05D007591 ORTHO05D009564 8.2e-10 67.4 125 44.8
Atru.chr5.956 Acer truncatum HOM05D007591 ORTHO05D009564 6.9e-09 64.3 75 52.0
Os04g0566000 Oryza sativa ssp. japonica HOM05D007591 ORTHO05D009564 4.5e-08 61.6 47 66.0


User provided reference genes

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