Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10011797m.g Eutrema salsugineum HOM05D006157 ORTHO05D007826 1.7e-108 396.0 196 100.0
Sp1g34500 Schrenkiella parvula HOM05D006157 ORTHO05D007826 1.0e-89 333.6 195 83.1
SpUn0102_0020 Schrenkiella parvula HOM05D006157 ORTHO05D007826 1.0e-89 333.6 195 83.1
BolSC99t61279H Brassica oleracea HOM05D006157 ORTHO05D007826 7.0e-86 320.9 195 80.0
BcaB07g33839 Brassica carinata HOM05D006157 ORTHO05D007826 9.2e-86 320.5 199 78.9
C06p01910 Brassica napus HOM05D006157 ORTHO05D007826 1.6e-85 319.7 195 80.0
CARHR037020 Cardamine hirsuta HOM05D006157 ORTHO05D007826 4.3e-83 311.6 194 76.3
Carub.0001s3622 Capsella rubella HOM05D006157 ORTHO05D007826 2.3e-81 305.8 196 75.0
A10p06400 Brassica napus HOM05D006157 ORTHO05D007826 3.0e-81 305.4 199 75.4
AL1G53700 Arabidopsis lyrata HOM05D006157 ORTHO05D007826 6.4e-79 297.7 197 74.1
AT1G47410 Arabidopsis thaliana HOM05D006157 ORTHO05D007826 2.4e-78 295.8 196 74.0
BcaC08g42947 Brassica carinata HOM05D006157 ORTHO05D007826 6.6e-76 287.7 195 72.8
Aa31sc924G20 Aethionema arabicum HOM05D006157 ORTHO05D007826 1.9e-67 259.6 209 66.5
THA.LOC104806945 Tarenaya hassleriana HOM05D006157 ORTHO05D007826 7.1e-54 214.5 196 55.6
Cfa018525 Carpinus fangiana HOM05D006157 ORTHO05D007826 1.5e-35 153.7 194 46.9
Duzib116G0710 Durio zibethinus HOM05D006157 ORTHO05D007826 2.5e-35 152.9 203 41.9
Haze_17545 Corylus avellana HOM05D006157 ORTHO05D007826 4.3e-35 152.1 194 47.4
Haze_17554 Corylus avellana HOM05D006157 ORTHO05D007826 4.3e-35 152.1 194 47.4
Atru.chr13.647 Acer truncatum HOM05D006157 ORTHO05D007826 5.6e-35 151.8 197 47.2
Gohir.A06G017000 Gossypium hirsutum HOM05D006157 ORTHO05D007826 2.8e-34 149.4 199 43.2
Gohir.D06G015100 Gossypium hirsutum HOM05D006157 ORTHO05D007826 3.7e-34 149.1 199 43.2
Gorai.010G017900 Gossypium raimondii HOM05D006157 ORTHO05D007826 3.7e-34 149.1 199 43.2
Actinidia23263 Actinidia chinensis HOM05D006157 ORTHO05D007826 1.8e-33 146.7 199 42.2
Thecc.08G011200 Theobroma cacao HOM05D006157 ORTHO05D007826 4.0e-33 145.6 159 47.2
QL02p005407 Quercus lobata HOM05D006157 ORTHO05D007826 2.6e-32 142.9 198 42.4
Ciclev10002442m.g Citrus clementina HOM05D006157 ORTHO05D007826 2.2e-31 139.8 205 43.9
Potri.002G127800 Populus trichocarpa HOM05D006157 ORTHO05D007826 2.2e-31 139.8 197 43.7
TWI56G1258 Tripterygium wilfordii HOM05D006157 ORTHO05D007826 2.9e-31 139.4 200 40.5
MD15G1085000 Malus domestica HOM05D006157 ORTHO05D007826 1.9e-30 136.7 188 44.7
CiPaw.15G061800 Carya illinoinensis HOM05D006157 ORTHO05D007826 2.7e-29 132.9 204 39.2
vmacro21540 Vaccinium macrocarpon HOM05D006157 ORTHO05D007826 3.5e-29 132.5 202 41.1
Sabra14G0022700 Salix brachista HOM05D006157 ORTHO05D007826 4.6e-29 132.1 201 45.3
Sed0015883 Sechium edule HOM05D006157 ORTHO05D007826 7.9e-29 131.3 197 39.6
Gohir.A03G079324 Gossypium hirsutum HOM05D006157 ORTHO05D007826 1.0e-28 131.0 188 39.9
Gorai.005G103500 Gossypium raimondii HOM05D006157 ORTHO05D007826 1.0e-28 131.0 188 39.4
Gohir.D02G092100 Gossypium hirsutum HOM05D006157 ORTHO05D007826 2.3e-28 129.8 188 39.4
Prupe.1G438800 Prunus persica HOM05D006157 ORTHO05D007826 2.3e-28 129.8 192 41.7
RcHm_v2.0_Chr6g0307431 Rosa chinensis HOM05D006157 ORTHO05D007826 8.7e-28 127.9 199 42.2
Cpa.g.c24415.4 Carica papaya HOM05D006157 ORTHO05D007826 1.5e-27 127.1 203 41.4
FAN15G3536 Fragaria x ananassa HOM05D006157 ORTHO05D007826 3.3e-27 125.9 199 39.2
Potri.014G032300 Populus trichocarpa HOM05D006157 ORTHO05D007826 3.3e-27 125.9 201 41.3
MELO3C010885.2 Cucumis melo HOM05D006157 ORTHO05D007826 7.4e-27 124.8 192 38.5
CsaV3_2G028070 Cucumis sativus L. HOM05D006157 ORTHO05D007826 1.6e-26 123.6 192 38.5
Hma1.2p1_0718F.1_g208450 Hydrangea macrophylla HOM05D006157 ORTHO05D007826 2.8e-26 122.9 195 36.9
PGR083G2028 Punica granatum HOM05D006157 ORTHO05D007826 4.8e-26 122.1 197 38.1
FAN20G0621 Fragaria x ananassa HOM05D006157 ORTHO05D007826 8.2e-26 121.3 194 39.7
Peaxi162Scf00064g00125 Petunia axillaris HOM05D006157 ORTHO05D007826 8.2e-26 121.3 198 35.9
Sed0006561 Sechium edule HOM05D006157 ORTHO05D007826 1.1e-25 120.9 165 41.8
Medtr1g019800 Medicago truncatula HOM05D006157 ORTHO05D007826 1.8e-25 120.2 193 38.3
Ca_13302_v3 Cicer arietinum L. HOM05D006157 ORTHO05D007826 2.4e-25 119.8 192 38.0
PGSC0003DMG400036180 Solanum tuberosum HOM05D006157 ORTHO05D007826 6.9e-25 118.2 202 39.1
EL10Ac1g01781 Beta vulgaris HOM05D006157 ORTHO05D007826 9.0e-25 117.9 225 35.1
FAN27G0611 Fragaria x ananassa HOM05D006157 ORTHO05D007826 1.2e-24 117.5 194 39.2
Nitab4.5_0004184g0060 Nicotiana tabacum HOM05D006157 ORTHO05D007890 1.2e-24 117.5 191 38.2
CSS0004131 Camellia sinensis var. sinensis HOM05D006157 ORTHO05D007826 1.5e-24 117.1 207 39.1
Sopen04g032780 Solanum pennellii HOM05D006157 ORTHO05D007826 4.5e-24 115.5 204 39.2
FvH4_2g34660 Fragaria vesca HOM05D006157 ORTHO05D007826 5.8e-24 115.2 196 39.3
Manes.05G171900 Manihot esculenta HOM05D006157 ORTHO05D007826 5.8e-24 115.2 201 37.8
Manes.05G171901 Manihot esculenta HOM05D006157 ORTHO05D007826 5.8e-24 115.2 201 37.8
AUR62022432 Chenopodium quinoa HOM05D006157 ORTHO05D007826 1.0e-23 114.4 221 33.9
Nitab4.5_0000686g0050 Nicotiana tabacum HOM05D006157 ORTHO05D007826 1.0e-23 114.4 200 37.0
AUR62039307 Chenopodium quinoa HOM05D006157 ORTHO05D007826 2.2e-23 113.2 205 36.1
Psat6g012720 Pisum sativum HOM05D006157 ORTHO05D007826 2.2e-23 113.2 158 41.8
CANSAT54G0006 Cannabis sativa HOM05D006157 ORTHO05D007826 3.8e-23 112.5 211 35.5
MD08G1103700 Malus domestica HOM05D006157 ORTHO05D007826 3.8e-23 112.5 190 36.8
Nitab4.5_0001101g0070 Nicotiana tabacum HOM05D006157 ORTHO05D007826 4.9e-23 112.1 200 39.0
Rhsim06G0048100 Rhododendron simsii HOM05D006157 ORTHO05D007826 8.4e-23 111.3 204 37.7
TPR.G13684 Trifolium pratense HOM05D006157 ORTHO05D007826 1.1e-22 110.9 158 41.8
Manes.18G032700 Manihot esculenta HOM05D006157 ORTHO05D007826 1.4e-22 110.5 197 38.1
Lalb_Chr14g0368791 Lupinus albus HOM05D006157 ORTHO05D007826 2.5e-22 109.8 162 40.1
Ah.05g168840 Amaranthus hybridus HOM05D006157 ORTHO05D007826 3.2e-22 109.4 171 40.9
PGSC0003DMG400015419 Solanum tuberosum HOM05D006157 ORTHO05D007826 3.2e-22 109.4 109 53.2
Dinv35975 Davidia involucrata HOM05D006157 ORTHO05D007826 5.5e-22 108.6 203 36.5
Lj5g0002869 Lotus japonicus HOM05D006157 ORTHO05D007826 9.3e-22 107.8 196 36.2
Eucgr.F00242 Eucalyptus grandis HOM05D006157 ORTHO05D007826 1.2e-21 107.5 193 34.7
Nn5g30225 Nelumbo nucifera HOM05D006157 ORTHO05D007826 2.1e-21 106.7 194 36.6
TAR628G1181 Trochodendron aralioides HOM05D006157 ORTHO05D007826 3.5e-21 105.9 206 34.0
AUR62019555 Chenopodium quinoa HOM05D006157 ORTHO05D007826 4.6e-21 105.5 113 46.9
Glyma.06G038400 Glycine max HOM05D006157 ORTHO05D007826 6.0e-21 105.1 195 35.4
Nitab4.5_0000453g0220 Nicotiana tabacum HOM05D006157 ORTHO05D007890 6.0e-21 105.1 191 36.1
ClCG08G015710 Citrullus lanatus HOM05D006157 ORTHO05D007826 1.3e-20 104.0 183 37.7
Lsat_1_v5_gn_4_124041 Lactuca sativa HOM05D006157 ORTHO05D007826 1.3e-20 104.0 200 35.5
Solyc12g088890.3 Solanum lycopersicum HOM05D006157 ORTHO05D007890 8.7e-20 101.3 157 42.0
Sc02g0007020 Simmondsia chinensis HOM05D006157 ORTHO05D007826 3.3e-19 99.4 196 34.2
VMungo1309G0335 Vigna mungo HOM05D006157 ORTHO05D007826 4.3e-19 99.0 197 34.5
Peaxi162Scf00528g00414 Petunia axillaris HOM05D006157 ORTHO05D007826 5.7e-19 98.6 188 36.2
VMungo0647G0691 Vigna mungo HOM05D006157 ORTHO05D007826 9.7e-19 97.8 190 35.8
Phvul.001G020800 Phaseolus vulgaris HOM05D006157 ORTHO05D007826 1.6e-18 97.1 193 35.8
Solyc04g079170.4 Solanum lycopersicum HOM05D006157 ORTHO05D007826 1.6e-18 97.1 191 37.2
GSVIVG01009525001 Vitis vinifera HOM05D006157 ORTHO05D007826 6.3e-18 95.1 195 33.8
Cc10_g04340 Coffea canephora HOM05D006157 ORTHO05D007826 8.2e-18 94.7 163 38.7
SalBow8G3379 Salvia bowleyana HOM05D006157 ORTHO05D007826 8.2e-18 94.7 188 35.1
Glyma.04G037500 Glycine max HOM05D006157 ORTHO05D007826 2.4e-17 93.2 191 36.6
DCAR_011305 Daucus carota HOM05D005231 ORTHO05D006387 4.1e-17 92.4 159 37.7
Phvul.009G063700 Phaseolus vulgaris HOM05D006157 ORTHO05D007826 4.1e-17 92.4 194 32.5
Lj4C53T12 Lonicera japonica HOM05D006157 ORTHO05D007826 6.9e-17 91.7 154 40.9
HanXRQChr09g0267931 Helianthus annuus HOM05D006157 ORTHO05D007826 1.2e-16 90.9 204 30.9
MSTRG.25101 Avicennia marina HOM05D006157 ORTHO05D007826 1.5e-16 90.5 191 34.0
Glyma.14G081800 Glycine max HOM05D006157 ORTHO05D007826 1.5e-16 90.5 158 36.1
BolC8t47476H Brassica oleracea HOM05D006157 ORTHO05D007826 2.6e-16 89.7 70 70.0
MBI02_g17343_MAGBIO Magnolia biondii HOM05D006157 ORTHO05D007826 2.6e-16 89.7 180 33.3
Sopen12g030790 Solanum pennellii HOM05D006157 ORTHO05D007826 3.4e-16 89.4 194 33.0
C08p06300 Brassica napus HOM05D006157 ORTHO05D007826 5.9e-16 88.6 70 68.6
ECA232G2668 Erigeron canadensis HOM05D006157 ORTHO05D007826 5.9e-16 88.6 201 31.8
Nn1g05836 Nelumbo nucifera HOM05D006157 ORTHO05D007826 7.7e-16 88.2 197 32.5
Glyma.17G243500 Glycine max HOM05D006157 ORTHO05D007826 2.2e-15 86.7 196 33.2
PSO541G3363 Papaver somniferum HOM05D006157 ORTHO05D007826 2.2e-15 86.7 191 31.9
Aqoxy6G01361 Aquilegia oxysepala HOM05D006157 ORTHO05D007826 5.0e-15 85.5 201 34.3
SGA_v2.0_scaffold14G07032 Striga asiatica HOM05D006157 ORTHO05D007826 2.5e-14 83.2 199 32.2
arahy.Tifrunner.gnm1.ann1.HUL940 Arachis hypogaea HOM05D006157 ORTHO05D007826 7.2e-14 81.6 132 38.6
arahy.Tifrunner.gnm1.ann1.R9H0NA Arachis hypogaea HOM05D006157 ORTHO05D007826 7.2e-14 81.6 132 38.6
Migut.C00597 Erythranthe guttata HOM05D006157 ORTHO05D007826 9.4e-14 81.3 151 37.7
Migut.N02699 Erythranthe guttata HOM05D006157 ORTHO05D007826 1.8e-12 77.0 96 43.8
PSO675G5393 Papaver somniferum HOM05D006157 ORTHO05D007826 3.9e-12 75.9 159 34.0
unitig_22.g6773 Utricularia gibba HOM05D006157 ORTHO05D007826 9.1e-09 64.7 161 31.7
ATR0100G006 Amborella trichopoda HOM05D006157 ORTHO05D007826 2.6e-08 63.2 77 37.7
HPP92_027520 Vanilla planifolia HOM05D006157 ORTHO05D007826 2.6e-08 63.2 166 28.3
Actinidia22616 Actinidia chinensis HOM05D006157 ORTHO05D007826 1.3e-07 60.8 141 39.0
ATR0100G061 Amborella trichopoda HOM05D006157 ORTHO05D007826 2.2e-07 60.1 77 37.7
Zm00001eb315050 Zea mays HOM05D006157 ORTHO05D007826 3.2e-06 56.2 48 56.2
BolC6t35322H Brassica oleracea HOM05D006157 ORTHO05D007826 4.2e-06 55.8 33 72.7
COL.COLO4_26474 Corchorus olitorius HOM05D006157 ORTHO05D007826 9.4e-06 54.7 189 26.5


User provided reference genes

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