Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10011704m.g Eutrema salsugineum HOM05D009838 ORTHO05D195974 1.1e-58 231.1 282 100.0
AT1G44224 Arabidopsis thaliana HOM05D009838 ORTHO05D012149 7.1e-15 85.5 282 48.9
Thhalv10012327m.g Eutrema salsugineum HOM05D009838 ORTHO05D012149 2.1e-14 84.0 282 55.0
Sp5g11640 Schrenkiella parvula HOM05D009838 ORTHO05D012149 1.9e-12 77.4 48 68.8
AL1G52260 Arabidopsis lyrata HOM05D009838 ORTHO05D012149 5.7e-12 75.9 280 48.6
Carub.0005s1689 Capsella rubella HOM05D009838 ORTHO05D012149 5.7e-12 75.9 48 66.7
AL5G30720 Arabidopsis lyrata HOM05D009838 ORTHO05D012149 2.1e-11 73.9 48 64.6
AT3G50570 Arabidopsis thaliana HOM05D009838 ORTHO05D012149 2.1e-11 73.9 48 64.6
Sp1g33500 Schrenkiella parvula HOM05D009838 ORTHO05D012149 2.1e-11 73.9 282 53.5
CARHR035890 Cardamine hirsuta HOM05D009838 ORTHO05D012149 2.8e-11 73.6 48 68.8
Thhalv10011140m.g Eutrema salsugineum HOM05D009838 ORTHO05D012149 6.3e-11 72.4 46 65.2
Aa31LG4G18740 Aethionema arabicum HOM05D009838 ORTHO05D012149 1.4e-10 71.2 46 65.2
A09p43610 Brassica napus HOM05D009838 ORTHO05D012149 2.4e-10 70.5 46 63.0
C08p25630 Brassica napus HOM05D009838 ORTHO05D012149 2.4e-10 70.5 46 63.0
BolC8t50182H Brassica oleracea HOM05D009838 ORTHO05D012149 2.4e-10 70.5 46 63.0
BraA09t39822Z Brassica rapa HOM05D009838 ORTHO05D012149 2.4e-10 70.5 46 63.0
CARHR160080 Cardamine hirsuta HOM05D009838 ORTHO05D012149 4.1e-10 69.7 46 63.0
Carub.0001s3514 Capsella rubella HOM05D009838 ORTHO05D012149 5.3e-10 69.3 46 63.0
BcaB01g00608 Brassica carinata HOM05D009838 ORTHO05D012149 9.0e-10 68.6 46 63.0
BcaC07g39518 Brassica carinata HOM05D009838 ORTHO05D012149 9.0e-10 68.6 44 63.6
Sp1g33480 Schrenkiella parvula HOM05D009838 ORTHO05D372636 2.6e-09 67.0 83 55.4


User provided reference genes

Program Settings