Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10011644m.g Eutrema salsugineum HOM05D006118 ORTHO05D007750 1.8e-187 659.1 329 100.0
Sp1g35230 Schrenkiella parvula HOM05D006118 ORTHO05D007750 3.2e-184 648.3 329 98.2
BcaB07g33772 Brassica carinata HOM05D006118 ORTHO05D007750 1.6e-183 646.0 329 97.3
BcaC08g43024 Brassica carinata HOM05D006118 ORTHO05D007750 2.7e-183 645.2 329 97.3
C06p02770 Brassica napus HOM05D006118 ORTHO05D007750 2.7e-183 645.2 329 97.3
AT1G48270 Arabidopsis thaliana HOM05D006118 ORTHO05D007750 1.0e-182 643.3 329 97.3
BolC6t35406H Brassica oleracea HOM05D006118 ORTHO05D007750 5.1e-182 641.0 329 95.7
AL1G54870 Arabidopsis lyrata HOM05D006118 ORTHO05D007750 2.0e-181 639.0 329 96.4
Carub.0001s3740 Capsella rubella HOM05D006118 ORTHO05D007750 5.7e-181 637.5 329 96.4
CARHR037890 Cardamine hirsuta HOM05D006118 ORTHO05D007750 5.7e-181 637.5 329 96.0
A06p04570 Brassica napus HOM05D006118 ORTHO05D007750 1.3e-180 636.3 330 96.7
BraA06t23661Z Brassica rapa HOM05D006118 ORTHO05D007750 1.3e-180 636.3 330 96.7
THA.LOC104824720 Tarenaya hassleriana HOM05D006118 ORTHO05D007750 6.5e-153 544.3 325 83.4
Cpa.g.sc146.16 Carica papaya HOM05D006118 ORTHO05D007750 8.0e-151 537.3 322 81.4
Ciclev10005468m.g Citrus clementina HOM05D006118 ORTHO05D007750 1.7e-148 529.6 327 80.1
Thecc.04G313700 Theobroma cacao HOM05D006118 ORTHO05D007750 4.1e-147 525.0 319 79.6
Gorai.005G073100 Gossypium raimondii HOM05D006118 ORTHO05D007750 1.6e-146 523.1 319 79.3
PSO063G1448 Papaver somniferum HOM05D006118 ORTHO05D007750 2.7e-146 522.3 329 77.2
FvH4_2g30820 Fragaria vesca HOM05D006118 ORTHO05D007750 3.5e-146 521.9 329 77.5
FAN20G1786 Fragaria x ananassa HOM05D006118 ORTHO05D007750 3.5e-146 521.9 329 77.5
Gohir.A02G058900 Gossypium hirsutum HOM05D006118 ORTHO05D007750 3.5e-146 521.9 319 79.3
Aa31LG10G5490 Aethionema arabicum HOM05D006118 ORTHO05D007750 4.5e-146 521.5 328 81.4
RcHm_v2.0_Chr6g0312021 Rosa chinensis HOM05D006118 ORTHO05D007750 4.5e-146 521.5 329 77.2
Gohir.D02G064600 Gossypium hirsutum HOM05D006118 ORTHO05D007750 1.3e-145 520.0 319 79.0
CiPaw.16G067300 Carya illinoinensis HOM05D006118 ORTHO05D007750 2.3e-145 519.2 321 78.8
Atru.chr4.3167 Acer truncatum HOM05D006118 ORTHO05D007750 3.8e-145 518.5 319 80.3
FAN15G2451 Fragaria x ananassa HOM05D006118 ORTHO05D007750 3.8e-145 518.5 329 76.9
FAN27G1493 Fragaria x ananassa HOM05D006118 ORTHO05D007750 1.1e-144 516.9 329 76.9
Ca_13095_v3 Cicer arietinum L. HOM05D006118 ORTHO05D007750 1.9e-144 516.2 329 77.2
PSO421G0086 Papaver somniferum HOM05D006118 ORTHO05D007750 2.5e-144 515.8 329 76.6
MD08G1073200 Malus domestica HOM05D006118 ORTHO05D007750 5.6e-144 514.6 329 75.7
arahy.Tifrunner.gnm1.ann1.ZI0SGT Arachis hypogaea HOM05D006118 ORTHO05D007750 1.6e-143 513.1 327 76.8
Prupe.1G402500 Prunus persica HOM05D006118 ORTHO05D007750 1.6e-143 513.1 329 76.0
Phvul.001G044800 Phaseolus vulgaris HOM05D006118 ORTHO05D007750 2.1e-143 512.7 327 77.7
CANSAT25G1353 Cannabis sativa HOM05D006118 ORTHO05D007750 2.8e-143 512.3 323 78.0
Duzib151G0955 Durio zibethinus HOM05D006118 ORTHO05D007750 1.8e-142 509.6 290 83.1
MD15G1048100 Malus domestica HOM05D006118 ORTHO05D007750 1.8e-142 509.6 321 76.6
Lj5g0024511 Lotus japonicus HOM05D006118 ORTHO05D007750 2.3e-142 509.2 329 76.6
Migut.E01785 Erythranthe guttata HOM05D006118 ORTHO05D007750 2.6e-141 505.8 332 75.6
Glyma.17G219300 Glycine max HOM05D006118 ORTHO05D007750 3.4e-141 505.4 327 76.5
arahy.Tifrunner.gnm1.ann1.Z643MN Arachis hypogaea HOM05D006118 ORTHO05D007750 4.4e-141 505.0 337 74.8
TAR624G0180 Trochodendron aralioides HOM05D006118 ORTHO05D007750 5.7e-141 504.6 321 77.6
GSVIVG01035487001 Vitis vinifera HOM05D006118 ORTHO05D007750 1.3e-140 503.4 324 76.5
MELO3C016921.2 Cucumis melo HOM05D006118 ORTHO05D007750 1.4e-139 500.0 327 74.6
Cc08_g01010 Coffea canephora HOM05D006118 ORTHO05D007750 2.4e-139 499.2 337 74.2
CsaV3_4G036130 Cucumis sativus L. HOM05D006118 ORTHO05D007750 2.4e-139 499.2 327 74.6
Eucgr.C00739 Eucalyptus grandis HOM05D006118 ORTHO05D007750 5.9e-138 494.6 331 74.9
ClCG05G015850 Citrullus lanatus HOM05D006118 ORTHO05D007750 7.8e-138 494.2 327 73.7
Hma1.2p1_0641F.1_g194200 Hydrangea macrophylla HOM05D006118 ORTHO05D007750 5.0e-137 491.5 307 78.5
HanXRQChr09g0261891 Helianthus annuus HOM05D006118 ORTHO05D007750 1.1e-136 490.3 333 71.8
Solyc08g061260.4 Solanum lycopersicum HOM05D006118 ORTHO05D007750 3.3e-136 488.8 332 74.1
Sopen08g016640 Solanum pennellii HOM05D006118 ORTHO05D007750 3.3e-136 488.8 332 74.1
PGSC0003DMG402012996 Solanum tuberosum HOM05D006118 ORTHO05D007750 5.6e-136 488.0 332 73.8
Lalb_Chr24g0393681 Lupinus albus HOM05D006118 ORTHO05D007750 9.5e-136 487.3 322 75.8
MSTRG.14088 Avicennia marina HOM05D006118 ORTHO05D007750 1.6e-135 486.5 324 74.4
Sabra08G0153100 Salix brachista HOM05D006118 ORTHO05D007750 8.0e-135 484.2 335 74.0
Sed0026686 Sechium edule HOM05D006118 ORTHO05D007750 3.1e-134 482.3 326 71.5
SGA_v2.0_scaffold163G37995 Striga asiatica HOM05D006118 ORTHO05D007750 4.0e-134 481.9 346 71.4
Aqoxy7G01030 Aquilegia oxysepala HOM05D006118 ORTHO05D007750 1.5e-133 479.9 329 72.6
VMungo0647G1968 Vigna mungo HOM05D006118 ORTHO05D007750 3.4e-133 478.8 284 81.3
Lsat_1_v5_gn_8_70541 Lactuca sativa HOM05D006118 ORTHO05D007750 9.8e-133 477.2 333 71.2
Manes.03G212200 Manihot esculenta HOM05D006118 ORTHO05D007750 9.8e-133 477.2 329 73.3
Glyma.14G107200 Glycine max HOM05D006118 ORTHO05D007750 2.9e-132 475.7 284 80.3
PGR142G4277 Punica granatum HOM05D006118 ORTHO05D007750 2.9e-132 475.7 280 82.5
DCAR_003726 Daucus carota HOM05D006118 ORTHO05D007750 1.1e-131 473.8 342 69.6
CSS0045297 Camellia sinensis var. sinensis HOM05D006118 ORTHO05D007750 3.5e-130 468.8 288 79.2
Rhsim13G0216900 Rhododendron simsii HOM05D006118 ORTHO05D007750 2.3e-129 466.1 333 70.9
Medtr1g015010 Medicago truncatula HOM05D006118 ORTHO05D007750 1.4e-126 456.8 329 71.1
Sc06g0000090 Simmondsia chinensis HOM05D006118 ORTHO05D007750 3.4e-125 452.2 322 70.2
SalBow1G5335 Salvia bowleyana HOM05D006118 ORTHO05D007750 7.8e-122 441.0 435 56.8
Nitab4.5_0001576g0100 Nicotiana tabacum HOM05D006118 ORTHO05D007750 3.9e-121 438.7 317 71.6
TWI53G1421 Tripterygium wilfordii HOM05D006118 ORTHO05D007750 1.9e-120 436.4 322 70.5
vmacro04115 Vaccinium macrocarpon HOM05D006118 ORTHO05D007750 2.8e-119 432.6 397 58.2
Psat6g023080 Pisum sativum HOM05D006118 ORTHO05D007750 3.6e-119 432.2 285 76.5
Actinidia01325 Actinidia chinensis HOM05D006118 ORTHO05D007750 6.8e-118 427.9 271 77.5
CDE06G0461 Ceratophyllum demersum HOM05D006118 ORTHO05D007750 1.5e-117 426.8 283 72.8
FAN24G3410 Fragaria x ananassa HOM05D006118 ORTHO05D007750 9.9e-117 424.1 263 76.4
Os06g0199800 Oryza sativa ssp. japonica HOM05D006118 ORTHO05D007750 1.3e-116 423.7 302 67.5
COL.COLO4_34509 Corchorus olitorius HOM05D006118 ORTHO05D007750 2.9e-116 422.5 341 64.5
Dinv41849 Davidia involucrata HOM05D006118 ORTHO05D007750 6.4e-116 421.4 270 75.9
ECA236G0212 Erigeron canadensis HOM05D006118 ORTHO05D007750 1.0e-113 414.1 272 73.5
TPR.G38901 Trifolium pratense HOM05D006118 ORTHO05D007750 2.3e-113 412.9 261 77.4
Oeu036787.2 Olea europaea HOM05D006118 ORTHO05D007750 1.9e-112 409.8 304 68.1
Hma1.2p1_0641F.1_g194210 Hydrangea macrophylla HOM05D006118 ORTHO05D007750 8.1e-111 404.4 242 79.8
Potri.008G206000 Populus trichocarpa HOM05D006118 ORTHO05D007750 2.4e-110 402.9 293 69.3
AagrBONN_evm.TU.Sc2ySwM_228.1339 Anthoceros agrestis HOM05D006118 ORTHO05D007750 3.1e-110 402.5 318 62.6
AUR62020280 Chenopodium quinoa HOM05D006118 ORTHO05D007750 3.5e-106 389.0 311 68.2
Ah.12g061330 Amaranthus hybridus HOM05D006118 ORTHO05D007750 3.9e-105 385.6 323 62.5
Peaxi162Scf00486g00116 Petunia axillaris HOM05D006118 ORTHO05D007750 1.5e-104 383.6 329 62.0
Mapoly0073s0070 Marchantia polymorpha HOM05D006118 ORTHO05D007750 3.3e-104 382.5 288 62.8
Pp3c15_15980 Physcomitrium patens HOM05D006118 ORTHO05D007750 5.8e-101 371.7 318 56.6
Oeu024208.1 Olea europaea HOM05D006118 ORTHO05D007750 1.7e-100 370.2 256 71.1
Pp3c9_15980 Physcomitrium patens HOM05D006118 ORTHO05D007750 1.7e-100 370.2 291 60.5
EL10Ac2g02406 Beta vulgaris HOM05D006118 ORTHO05D007750 2.4e-99 366.3 325 60.6
Hund25545 Selenicereus undatus HOM05D006118 ORTHO05D007750 6.7e-97 358.2 286 66.4
SMO119G0499 Selaginella moellendorffii HOM05D006118 ORTHO05D007750 1.3e-95 354.0 261 65.5
Haze_18321 Corylus avellana HOM05D006118 ORTHO05D007750 5.3e-94 348.6 651 37.8
BcaB01g03835 Brassica carinata HOM05D006118 ORTHO05D007750 1.9e-88 330.1 193 85.0
AUR62037725 Chenopodium quinoa HOM05D006118 ORTHO05D007750 3.7e-87 325.9 324 57.7
ATR0598G044 Amborella trichopoda HOM05D006118 ORTHO05D007750 9.0e-86 321.2 206 75.2
HPP92_016236 Vanilla planifolia HOM05D006118 ORTHO05D007750 1.4e-83 313.9 296 56.4
BcaB08g36375 Brassica carinata HOM05D006118 ORTHO05D007750 5.3e-78 295.4 193 79.3
Lj7A209G43 Lonicera japonica HOM05D006118 ORTHO05D007750 5.9e-77 292.0 240 65.0
arahy.Tifrunner.gnm1.ann1.C1NZN8 Arachis hypogaea HOM05D006118 ORTHO05D007750 5.5e-75 285.4 318 53.5
Zm00001eb278600 Zea mays HOM05D006118 ORTHO05D007750 7.9e-74 281.6 199 65.3
CBR_g36835 Chara braunii HOM05D006118 ORTHO05D007750 6.3e-71 271.9 222 58.6
PGSC0003DMG401012996 Solanum tuberosum HOM05D006118 ORTHO05D007750 1.1e-67 261.2 164 78.0
BcaB01g01553 Brassica carinata HOM05D006118 ORTHO05D007750 1.6e-66 257.3 145 85.5
BcaB07g32513 Brassica carinata HOM05D006118 ORTHO05D007750 6.7e-65 251.9 178 69.1
MD15G1048300 Malus domestica HOM05D006118 ORTHO05D007750 3.7e-63 246.1 245 55.9
arahy.Tifrunner.gnm1.ann1.K6H74S Arachis hypogaea HOM05D006118 ORTHO05D007750 3.6e-58 229.6 170 67.6
unitig_8.g4842 Utricularia gibba HOM05D006118 ORTHO05D007750 4.7e-58 229.2 164 67.7
Nitab4.5_0009849g0030 Nicotiana tabacum HOM05D006118 ORTHO05D007750 1.8e-57 227.3 329 45.0
arahy.Tifrunner.gnm1.ann1.M0UG3B Arachis hypogaea HOM05D005235 ORTHO05D006938 2.5e-43 180.3 131 69.5
Lalb_Chr23g0268011 Lupinus albus HOM05D006118 ORTHO05D007750 2.3e-41 173.7 101 79.2
Lj7A209G42 Lonicera japonica HOM05D006118 ORTHO05D007750 1.2e-37 161.4 90 83.3
PRCOL_00004868 Prasinoderma coloniale HOM05D006118 ORTHO05D007750 3.0e-33 146.7 272 36.4
PRCOL_00005697 Prasinoderma coloniale HOM05D006118 ORTHO05D007750 8.3e-31 138.7 272 30.9
ATR0684G160 Amborella trichopoda HOM05D006118 ORTHO05D007750 3.5e-29 133.3 92 67.4
SEGI_23264 Sequoiadendron giganteum HOM05D006118 ORTHO05D007750 1.0e-25 121.7 80 72.5
MCO03G156 Micromonas commoda HOM05D006118 ORTHO05D007750 5.0e-20 102.8 372 25.5
BcaB01g01552 Brassica carinata HOM05D006118 ORTHO05D007750 9.8e-16 88.6 53 86.8
Lalb_Chr23g0268021 Lupinus albus HOM05D006118 ORTHO05D007750 3.6e-10 70.1 46 73.9
SEGI_18851 Sequoiadendron giganteum HOM05D006118 ORTHO05D007750 1.4e-06 58.2 79 40.5
MD15G1048200 Malus domestica HOM05D006118 ORTHO05D007750 3.2e-06 57.0 59 50.8
HPP92_016211 Vanilla planifolia HOM05D006118 ORTHO05D007750 4.1e-06 56.6 39 64.1
MSTRG.1710 Avicennia marina HOM05D006118 ORTHO05D007750 7.1e-06 55.8 30 76.7


User provided reference genes

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