Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10011472m.g Eutrema salsugineum HOM05D007068 ORTHO05D008590 1.3e-255 885.9 451 100.0
Sp1g35530 Schrenkiella parvula HOM05D007068 ORTHO05D008590 7.3e-187 657.5 448 77.2
BcaB07g33743 Brassica carinata HOM05D007068 ORTHO05D008590 1.1e-182 643.7 450 77.3
AL1G55220 Arabidopsis lyrata HOM05D007068 ORTHO05D008590 1.2e-181 640.2 448 75.7
CARHR038180 Cardamine hirsuta HOM05D007068 ORTHO05D008590 2.8e-178 629.0 449 75.3
C06p03180 Brassica napus HOM05D007068 ORTHO05D008590 3.1e-177 625.5 451 76.1
AT1G48580 Arabidopsis thaliana HOM05D007068 ORTHO05D008590 1.7e-175 619.8 470 70.6
A06p04350 Brassica napus HOM05D007068 ORTHO05D008590 1.1e-174 617.1 447 75.4
BcaC08g43059 Brassica carinata HOM05D007068 ORTHO05D008590 2.4e-174 615.9 472 72.5
BolC6t35436H Brassica oleracea HOM05D007068 ORTHO05D008590 2.4e-174 615.9 472 72.5
Carub.0001s3769 Capsella rubella HOM05D007068 ORTHO05D008590 4.6e-173 611.7 447 72.7
BraA06t23639Z Brassica rapa HOM05D007068 ORTHO05D008590 5.8e-168 594.7 480 70.6
Aa31LG10G5220 Aethionema arabicum HOM05D007068 ORTHO05D008590 2.9e-143 512.7 455 62.9
Duzib084G0836 Durio zibethinus HOM05D007068 ORTHO05D008590 7.5e-67 258.8 462 39.4
Atru.chr9.1734 Acer truncatum HOM05D007068 ORTHO05D008590 6.4e-66 255.8 463 39.5
Thecc.03G056900 Theobroma cacao HOM05D007068 ORTHO05D008590 5.1e-63 246.1 452 39.4
Cfa019656 Carpinus fangiana HOM05D007068 ORTHO05D008590 4.3e-62 243.0 460 37.0
Potri.012G047000 Populus trichocarpa HOM05D007068 ORTHO05D008590 2.3e-60 237.3 469 39.7
COL.COLO4_04377 Corchorus olitorius HOM05D007068 ORTHO05D008590 1.2e-59 235.0 452 39.4
Sed0003101 Sechium edule HOM05D007068 ORTHO05D008590 1.2e-59 235.0 469 34.8
MELO3C017359.2 Cucumis melo HOM05D007068 ORTHO05D008590 1.9e-57 227.6 467 34.3
Eucgr.K02273 Eucalyptus grandis HOM05D007068 ORTHO05D008590 3.2e-57 226.9 470 35.7
CANSAT80G0386 Cannabis sativa HOM05D007068 ORTHO05D008590 7.1e-57 225.7 457 37.6
CsaV3_1G004370 Cucumis sativus L. HOM05D007068 ORTHO05D008590 2.7e-56 223.8 468 35.0
Haze_18849 Corylus avellana HOM05D007068 ORTHO05D008590 1.0e-55 221.9 493 33.3
Sabra12G0033000 Salix brachista HOM05D007068 ORTHO05D008590 3.0e-55 220.3 504 36.9
CiPaw.16G093400 Carya illinoinensis HOM05D007068 ORTHO05D008590 1.5e-54 218.0 457 34.8
TAR622G0435 Trochodendron aralioides HOM05D007068 ORTHO05D008590 2.5e-54 217.2 477 35.2
Nn3g18277 Nelumbo nucifera HOM05D007068 ORTHO05D008590 3.3e-54 216.9 498 33.1
Gohir.A07G061700 Gossypium hirsutum HOM05D007068 ORTHO05D008590 4.3e-54 216.5 449 37.6
Gohir.D07G066400 Gossypium hirsutum HOM05D007068 ORTHO05D008590 9.6e-54 215.3 452 37.8
ClCG06G014310 Citrullus lanatus HOM05D007068 ORTHO05D008590 1.6e-53 214.5 470 33.6
Gorai.001G070000 Gossypium raimondii HOM05D007068 ORTHO05D008590 1.1e-52 211.8 454 37.2
RcHm_v2.0_Chr7g0178441 Rosa chinensis HOM05D007068 ORTHO05D008590 1.1e-52 211.8 452 38.3
Dinv17551 Davidia involucrata HOM05D007068 ORTHO05D008590 1.4e-52 211.5 432 38.4
Hma1.2p1_0669F.1_g200120 Hydrangea macrophylla HOM05D007068 ORTHO05D008590 1.4e-52 211.5 477 35.8
SalBow1G5613 Salvia bowleyana HOM05D007068 ORTHO05D008590 1.7e-50 204.5 452 35.0
Aqoxy3G00060 Aquilegia oxysepala HOM05D007068 ORTHO05D008590 1.4e-49 201.4 461 35.6
Prupe.5G233500 Prunus persica HOM05D007068 ORTHO05D008590 1.4e-49 201.4 475 33.5
Oeu031766.1 Olea europaea HOM05D007068 ORTHO05D008590 1.9e-49 201.1 473 35.1
Cpa.g.sc3.397 Carica papaya HOM05D007068 ORTHO05D008590 4.2e-49 199.9 449 37.0
FvH4_5g17330 Fragaria vesca HOM05D007068 ORTHO05D008590 1.2e-48 198.4 449 35.6
FAN18G2889 Fragaria x ananassa HOM05D007068 ORTHO05D008590 1.2e-48 198.4 449 35.6
PGSC0003DMG400005672 Solanum tuberosum HOM05D007068 ORTHO05D008590 4.6e-48 196.4 456 32.7
Rhsim08G0124500 Rhododendron simsii HOM05D007068 ORTHO05D008590 5.1e-47 193.0 444 34.0
QL10p029594 Quercus lobata HOM05D007068 ORTHO05D008590 8.7e-47 192.2 408 35.3
FAN13G0457 Fragaria x ananassa HOM05D007068 ORTHO05D008590 1.1e-46 191.8 451 35.9
Actinidia39838 Actinidia chinensis HOM05D007068 ORTHO05D008590 1.5e-46 191.4 452 34.5
Solyc03g118700.3 Solanum lycopersicum HOM05D007068 ORTHO05D008590 1.9e-46 191.0 470 33.6
Lalb_Chr16g0386991 Lupinus albus HOM05D007068 ORTHO05D008590 2.5e-46 190.7 456 34.2
Migut.D01541 Erythranthe guttata HOM05D007068 ORTHO05D008590 7.3e-46 189.1 473 32.8
GSVIVG01011540001 Vitis vinifera HOM05D007068 ORTHO05D008590 2.1e-45 187.6 452 31.9
PSO478G2297 Papaver somniferum HOM05D007068 ORTHO05D008590 3.6e-45 186.8 453 34.9
Ca_17189_v3 Cicer arietinum L. HOM05D007068 ORTHO05D008590 6.2e-45 186.0 445 31.5
PSO017G3869 Papaver somniferum HOM05D007068 ORTHO05D008590 6.2e-45 186.0 458 34.3
CAN.G843.56 Capsicum annuum HOM05D007068 ORTHO05D008590 1.8e-44 184.5 443 33.9
CSS0009831 Camellia sinensis var. sinensis HOM05D007068 ORTHO05D008590 2.4e-44 184.1 461 32.5
Medtr8g107330 Medicago truncatula HOM05D007068 ORTHO05D008590 2.4e-44 184.1 446 33.4
VMungo0251G0101 Vigna mungo HOM05D007068 ORTHO05D008590 2.4e-44 184.1 444 30.6
Manes.14G171300 Manihot esculenta HOM05D007068 ORTHO05D008590 1.2e-43 181.8 452 34.7
Nitab4.5_0004556g0050 Nicotiana tabacum HOM05D007068 ORTHO05D008590 2.6e-43 180.6 448 33.9
Nitab4.5_0003401g0040 Nicotiana tabacum HOM05D007068 ORTHO05D008590 3.4e-43 180.3 253 44.7
SGA_v2.0_scaffold36G14383 Striga asiatica HOM05D007068 ORTHO05D008590 2.9e-42 177.2 459 32.0
Cc04_g06260 Coffea canephora HOM05D007068 ORTHO05D008590 4.9e-42 176.4 474 31.4
Peaxi162Scf00683g00453 Petunia axillaris HOM05D007068 ORTHO05D008590 1.4e-41 174.9 456 32.5
Psat7g003560 Pisum sativum HOM05D007068 ORTHO05D008590 4.2e-41 173.3 443 31.8
ECA238G2622 Erigeron canadensis HOM05D007068 ORTHO05D008590 7.1e-41 172.6 257 41.2
arahy.Tifrunner.gnm1.ann1.N01HH5 Arachis hypogaea HOM05D007068 ORTHO05D008590 2.1e-40 171.0 307 37.8
MD06G1227000 Malus domestica HOM05D007068 ORTHO05D008590 2.7e-40 170.6 282 39.4
FAN04G2769 Fragaria x ananassa HOM05D007068 ORTHO05D008590 1.3e-39 168.3 453 33.1
Lj4g0019727 Lotus japonicus HOM05D007068 ORTHO05D008590 5.1e-39 166.4 446 32.5
TPR.G1401 Trifolium pratense HOM05D007068 ORTHO05D008590 5.1e-39 166.4 464 32.1
Lsat_1_v5_gn_2_14700 Lactuca sativa HOM05D007068 ORTHO05D008590 1.1e-38 165.2 486 30.9
arahy.Tifrunner.gnm1.ann1.ZH8P6D Arachis hypogaea HOM05D007068 ORTHO05D008590 7.3e-38 162.5 247 40.9
Glyma.08G054400 Glycine max HOM05D007068 ORTHO05D008590 4.8e-37 159.8 445 29.2
MBI13_g47078_MAGBIO Magnolia biondii HOM05D007068 ORTHO05D008590 1.4e-36 158.3 274 38.0
Phvul.002G330100 Phaseolus vulgaris HOM05D007068 ORTHO05D008590 9.0e-36 155.6 457 30.0
DCAR_014504 Daucus carota HOM05D007068 ORTHO05D008590 2.6e-35 154.1 454 32.4
Hma1.2p1_0669F.1_g200130 Hydrangea macrophylla HOM05D007068 ORTHO05D008590 9.9e-35 152.1 477 31.7
Peaxi162Scf00683g00454 Petunia axillaris HOM05D007068 ORTHO05D008590 3.2e-33 147.1 446 30.7
EL10Ac4g08480 Beta vulgaris HOM05D007068 ORTHO05D008590 6.0e-32 142.9 226 41.6
Hund10357 Selenicereus undatus HOM05D007068 ORTHO05D008590 1.0e-31 142.1 226 42.0
HPP92_002012 Vanilla planifolia HOM05D007068 ORTHO05D008590 3.7e-29 133.7 472 28.4
Ah.06g187490 Amaranthus hybridus HOM05D007068 ORTHO05D008590 4.0e-28 130.2 227 37.9
AUR62037972 Chenopodium quinoa HOM05D007068 ORTHO05D008590 4.0e-28 130.2 216 41.7
CDE02G3810 Ceratophyllum demersum HOM05D007068 ORTHO05D008590 1.3e-26 125.2 249 36.1
VMungo0251G0567 Vigna mungo HOM05D007068 ORTHO05D008590 1.7e-26 124.8 248 33.9
Ciclev10008793m.g Citrus clementina HOM05D007068 ORTHO05D008590 1.9e-25 121.3 346 32.9
SMO164G0186 Selaginella moellendorffii HOM05D007068 ORTHO05D008590 3.0e-23 114.0 217 34.6
Mapoly0060s0110 Marchantia polymorpha HOM05D007068 ORTHO05D008590 8.7e-23 112.5 180 37.2
Sopen03g037660 Solanum pennellii HOM05D007068 ORTHO05D008590 4.3e-22 110.2 201 38.3
ATR0618G302 Amborella trichopoda HOM05D007068 ORTHO05D008590 5.7e-22 109.8 176 39.8
Sc10g0009180 Simmondsia chinensis HOM05D007068 ORTHO05D008590 1.6e-21 108.2 354 31.6
SMO164G0105 Selaginella moellendorffii HOM05D020476 ORTHO05D008590 1.1e-20 105.5 215 33.0
HanXRQChr14g0431751 Helianthus annuus HOM05D007068 ORTHO05D008590 1.5e-19 101.7 79 59.5
SEGI_36605 Sequoiadendron giganteum HOM05D007068 ORTHO05D008590 3.4e-19 100.5 103 50.5
Zm00001eb304630 Zea mays HOM05D007068 ORTHO05D008590 7.9e-16 89.4 304 28.9
AagrBONN_evm.TU.Sc2ySwM_362.2609 Anthoceros agrestis HOM05D007068 ORTHO05D008590 1.8e-15 88.2 147 39.5
vmacro17572 Vaccinium macrocarpon HOM05D007068 ORTHO05D008590 6.7e-15 86.3 58 69.0
unitig_8.g4506 Utricularia gibba HOM05D007068 ORTHO05D008590 7.4e-14 82.8 463 26.6
Pp3c3_22100 Physcomitrium patens HOM05D007068 ORTHO05D008590 1.8e-12 78.2 182 30.2
Pp3c3_22103 Physcomitrium patens HOM05D007068 ORTHO05D008590 1.8e-12 78.2 182 30.2
FAN08G2700 Fragaria x ananassa HOM05D007068 ORTHO05D008590 2.4e-12 77.8 122 39.3
arahy.Tifrunner.gnm1.ann1.USF1F6 Arachis hypogaea HOM05D007068 ORTHO05D008590 3.8e-10 70.5 56 60.7
Carub.0006s1097 Capsella rubella HOM05D000032 ORTHO05D114360 5.5e-09 66.6 45 64.4
VMungo1215G1321 Vigna mungo HOM05D007068 ORTHO05D008590 9.4e-09 65.9 89 39.3
VMungo0251G2390 Vigna mungo HOM05D007068 ORTHO05D008590 7.4e-06 56.2 78 37.2


User provided reference genes

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