Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10011141m.g Eutrema salsugineum HOM05D008628 ORTHO05D010443 1.3e-53 212.6 97 100.0
Thhalv10011104m.g Eutrema salsugineum HOM05D008628 ORTHO05D010443 1.7e-45 185.7 97 86.6
Thhalv10010855m.g Eutrema salsugineum HOM05D008628 ORTHO05D010443 3.2e-39 164.9 97 78.4
Thhalv10011021m.g Eutrema salsugineum HOM05D008628 ORTHO05D010443 9.3e-39 163.3 97 79.4
Thhalv10011057m.g Eutrema salsugineum HOM05D008628 ORTHO05D010443 1.5e-36 156.0 97 74.2
Thhalv10011101m.g Eutrema salsugineum HOM05D008628 ORTHO05D010443 1.6e-35 152.5 97 71.1
Thhalv10011083m.g Eutrema salsugineum HOM05D008628 ORTHO05D010443 2.8e-35 151.8 97 72.2
AL5G30140 Arabidopsis lyrata HOM05D008628 ORTHO05D010443 4.5e-33 144.4 97 64.9
C07p28310 Brassica napus HOM05D008628 ORTHO05D010443 3.2e-31 138.3 97 60.8
BolC7t43371H Brassica oleracea HOM05D008628 ORTHO05D010443 3.2e-31 138.3 97 60.8
AT3G50020 Arabidopsis thaliana HOM05D008628 ORTHO05D010443 4.2e-31 137.9 97 63.9
A06p46700 Brassica napus HOM05D008628 ORTHO05D010443 5.4e-31 137.5 97 61.9
Carub.0005s1637 Capsella rubella HOM05D008628 ORTHO05D010443 1.6e-30 136.0 97 61.9
Sp2g10200 Schrenkiella parvula HOM05D008628 ORTHO05D010443 3.5e-30 134.8 98 63.3
Thhalv10001147m.g Eutrema salsugineum HOM05D008628 ORTHO05D010443 2.3e-29 132.1 98 62.2
CARHR176870 Cardamine hirsuta HOM05D008628 ORTHO05D010443 3.0e-29 131.7 97 61.9
Carub.0008s0288 Capsella rubella HOM05D008628 ORTHO05D010443 4.8e-27 124.4 96 58.3
AL8G13560 Arabidopsis lyrata HOM05D008628 ORTHO05D010443 1.1e-26 123.2 93 57.0
BraA06t27542Z Brassica rapa HOM05D008628 ORTHO05D010443 1.1e-26 123.2 97 55.7
THA.LOC109116389 Tarenaya hassleriana HOM05D008628 ORTHO05D010443 1.4e-26 122.9 98 58.2
Sp2g10210 Schrenkiella parvula HOM05D008628 ORTHO05D010443 6.9e-26 120.6 98 56.1
AL5G30120 Arabidopsis lyrata HOM05D008628 ORTHO05D010443 9.9e-25 116.7 76 67.1
Thhalv10001145m.g Eutrema salsugineum HOM05D008628 ORTHO05D010443 1.4e-23 112.8 98 56.1
Sp5g12080 Schrenkiella parvula HOM05D002032 ORTHO05D002247 2.7e-22 108.6 68 70.6
BcaC06g34456 Brassica carinata HOM05D008628 ORTHO05D010443 3.3e-20 101.7 69 66.7
BcaC06g31563 Brassica carinata HOM05D008628 ORTHO05D010443 5.6e-20 100.9 69 66.7
SpUn1030_0010 Schrenkiella parvula HOM05D008628 ORTHO05D010443 5.6e-20 100.9 69 71.0
Rhsim10G0168600 Rhododendron simsii HOM05D008628 ORTHO05D010443 1.8e-18 95.9 93 49.5
vmacro00116 Vaccinium macrocarpon HOM05D008628 ORTHO05D010443 2.9e-16 88.6 93 45.2
Rhsim11G0040900 Rhododendron simsii HOM05D008628 ORTHO05D010443 4.9e-16 87.8 100 45.0
Rhsim11G0041100 Rhododendron simsii HOM05D008628 ORTHO05D010443 4.9e-16 87.8 93 46.2
AT5G45277 Arabidopsis thaliana HOM05D008628 ORTHO05D010443 3.2e-15 85.1 69 56.5
Rhsim11G0041000 Rhododendron simsii HOM05D008628 ORTHO05D010443 1.8e-13 79.3 94 43.6
Hma1.2p1_2755F.1_g327950 Hydrangea macrophylla HOM05D008628 ORTHO05D010443 1.9e-12 75.9 88 48.9
Peaxi162Scf00897g00013 Petunia axillaris HOM05D008628 ORTHO05D010443 1.9e-12 75.9 88 40.9
Nitab4.5_0000881g0060 Nicotiana tabacum HOM05D008628 ORTHO05D010443 9.7e-12 73.6 88 46.6
Nitab4.5_0009740g0010 Nicotiana tabacum HOM05D008628 ORTHO05D010443 2.8e-11 72.0 88 45.5
Actinidia05828 Actinidia chinensis HOM05D008628 ORTHO05D010443 1.4e-10 69.7 88 44.3
Rhsim10G0168400 Rhododendron simsii HOM05D008628 ORTHO05D010443 1.8e-10 69.3 66 50.0
Rhsim10G0168500 Rhododendron simsii HOM05D008628 ORTHO05D010443 5.3e-10 67.8 70 50.0
Nn4g26614 Nelumbo nucifera HOM05D008628 ORTHO05D010443 1.2e-09 66.6 86 41.9
Peaxi162Scf00897g00113 Petunia axillaris HOM05D000048 ORTHO05D000207 1.2e-09 66.6 69 43.5
Peaxi162Scf79264g00001 Petunia axillaris HOM05D008628 ORTHO05D010443 1.2e-09 66.6 69 43.5
TWI34G0474 Tripterygium wilfordii HOM05D008628 ORTHO05D010443 1.2e-09 66.6 75 45.3
Dinv43524 Davidia involucrata HOM05D004910 ORTHO05D006864 1.0e-08 63.5 70 45.7
CAN.G630.2 Capsicum annuum HOM05D009680 ORTHO05D000653 8.5e-08 60.5 67 46.3
Dinv43966 Davidia involucrata HOM05D008628 ORTHO05D010443 1.9e-07 59.3 69 44.9
Aqoxy117s001 Aquilegia oxysepala HOM05D001004 ORTHO05D000653 3.2e-07 58.5 87 37.9
Aqoxy3G01749 Aquilegia oxysepala HOM05D001004 ORTHO05D000653 3.2e-07 58.5 87 37.9
Carub.0008s0507 Capsella rubella HOM05D001004 ORTHO05D000653 5.5e-07 57.8 70 47.1
Cfa005539 Carpinus fangiana HOM05D001004 ORTHO05D000653 5.5e-07 57.8 70 42.9
Nn1g09270 Nelumbo nucifera HOM05D008628 ORTHO05D000653 5.5e-07 57.8 85 40.0
SGA_v2.0_scaffold14G07008 Striga asiatica HOM05D000760 ORTHO05D000618 9.3e-07 57.0 84 44.0
Eucgr.C02276 Eucalyptus grandis HOM05D001004 ORTHO05D000653 1.2e-06 56.6 64 45.3
AL8G16730 Arabidopsis lyrata HOM05D001004 ORTHO05D000653 1.6e-06 56.2 70 45.7
A06p47800 Brassica napus HOM05D001004 ORTHO05D000653 1.6e-06 56.2 70 48.6
PGSC0003DMG400026953 Solanum tuberosum HOM05D009680 ORTHO05D010443 1.6e-06 56.2 67 46.3
TAR376G1036 Trochodendron aralioides HOM05D001004 ORTHO05D000653 1.6e-06 56.2 86 40.7
THA.LOC104805628 Tarenaya hassleriana HOM05D001004 ORTHO05D000653 2.1e-06 55.8 65 47.7
COL.COLO4_35913 Corchorus olitorius HOM05D001004 ORTHO05D000653 4.6e-06 54.7 86 39.5
Oeu017841.1 Olea europaea HOM05D001004 ORTHO05D000653 4.6e-06 54.7 87 37.9
Sp2g08400 Schrenkiella parvula HOM05D001004 ORTHO05D000653 4.6e-06 54.7 70 45.7
Migut.H02350 Erythranthe guttata HOM05D009680 ORTHO05D000653 7.9e-06 53.9 70 42.9


User provided reference genes

Program Settings