Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10011057m.g Eutrema salsugineum HOM05D008628 ORTHO05D010443 2.3e-53 211.8 97 100.0
Thhalv10011101m.g Eutrema salsugineum HOM05D008628 ORTHO05D010443 2.1e-46 188.7 97 88.7
Thhalv10011083m.g Eutrema salsugineum HOM05D008628 ORTHO05D010443 1.3e-45 186.0 97 85.6
Thhalv10011141m.g Eutrema salsugineum HOM05D008628 ORTHO05D010443 5.6e-36 154.1 97 74.2
Thhalv10011104m.g Eutrema salsugineum HOM05D008628 ORTHO05D010443 2.1e-35 152.1 97 72.2
Thhalv10010855m.g Eutrema salsugineum HOM05D008628 ORTHO05D010443 1.8e-34 149.1 97 72.2
AL5G30140 Arabidopsis lyrata HOM05D008628 ORTHO05D010443 2.9e-32 141.7 97 67.0
AT3G50020 Arabidopsis thaliana HOM05D008628 ORTHO05D010443 2.4e-31 138.7 97 67.0
Carub.0005s1637 Capsella rubella HOM05D008628 ORTHO05D010443 2.5e-28 128.6 93 62.4
Thhalv10011021m.g Eutrema salsugineum HOM05D008628 ORTHO05D010443 1.6e-27 125.9 97 63.9
C07p28310 Brassica napus HOM05D008628 ORTHO05D010443 6.2e-27 124.0 97 59.8
BolC7t43371H Brassica oleracea HOM05D008628 ORTHO05D010443 6.2e-27 124.0 97 59.8
A06p46700 Brassica napus HOM05D008628 ORTHO05D010443 1.8e-26 122.5 97 59.8
THA.LOC109116389 Tarenaya hassleriana HOM05D008628 ORTHO05D010443 1.2e-25 119.8 98 57.1
CARHR176870 Cardamine hirsuta HOM05D008628 ORTHO05D010443 2.6e-25 118.6 97 56.7
Sp2g10200 Schrenkiella parvula HOM05D008628 ORTHO05D010443 3.4e-25 118.2 98 58.2
AL8G13560 Arabidopsis lyrata HOM05D008628 ORTHO05D010443 8.4e-24 113.6 93 54.8
Carub.0008s0288 Capsella rubella HOM05D008628 ORTHO05D010443 1.4e-23 112.8 93 54.8
Thhalv10001147m.g Eutrema salsugineum HOM05D008628 ORTHO05D010443 4.2e-23 111.3 98 55.1
BraA06t27542Z Brassica rapa HOM05D008628 ORTHO05D010443 1.6e-22 109.4 97 54.6
Sp2g10210 Schrenkiella parvula HOM05D008628 ORTHO05D010443 1.6e-22 109.4 98 53.1
Thhalv10001145m.g Eutrema salsugineum HOM05D008628 ORTHO05D010443 2.3e-21 105.5 94 55.3
AL5G30120 Arabidopsis lyrata HOM05D008628 ORTHO05D010443 1.5e-20 102.8 76 64.5
Sp5g12080 Schrenkiella parvula HOM05D002032 ORTHO05D002247 3.3e-20 101.7 68 69.1
SpUn1030_0010 Schrenkiella parvula HOM05D008628 ORTHO05D010443 1.2e-17 93.2 69 69.6
Rhsim10G0168600 Rhododendron simsii HOM05D008628 ORTHO05D010443 4.5e-17 91.3 94 48.9
BcaC06g34456 Brassica carinata HOM05D008628 ORTHO05D010443 1.3e-16 89.7 69 63.8
BcaC06g31563 Brassica carinata HOM05D008628 ORTHO05D010443 3.8e-16 88.2 69 62.3
Rhsim11G0041100 Rhododendron simsii HOM05D008628 ORTHO05D010443 4.2e-15 84.7 94 45.7
vmacro00116 Vaccinium macrocarpon HOM05D008628 ORTHO05D010443 1.2e-14 83.2 94 45.7
Rhsim11G0040900 Rhododendron simsii HOM05D008628 ORTHO05D010443 2.1e-14 82.4 101 44.6
Rhsim11G0041000 Rhododendron simsii HOM05D008628 ORTHO05D010443 1.3e-13 79.7 94 46.8
AT5G45277 Arabidopsis thaliana HOM05D008628 ORTHO05D010443 8.7e-13 77.0 69 53.6
Hma1.2p1_2755F.1_g327950 Hydrangea macrophylla HOM05D008628 ORTHO05D010443 4.3e-12 74.7 88 50.0
Nn4g26614 Nelumbo nucifera HOM05D008628 ORTHO05D010443 2.2e-11 72.4 89 42.7
Actinidia05828 Actinidia chinensis HOM05D008628 ORTHO05D010443 2.4e-10 68.9 88 43.2
Rhsim10G0168500 Rhododendron simsii HOM05D008628 ORTHO05D010443 6.9e-10 67.4 70 51.4
Rhsim10G0168400 Rhododendron simsii HOM05D008628 ORTHO05D010443 1.2e-09 66.6 66 50.0
Nitab4.5_0000014g0490 Nicotiana tabacum HOM05D009680 ORTHO05D010443 1.5e-09 66.2 87 42.5
TWI34G0474 Tripterygium wilfordii HOM05D008628 ORTHO05D010443 5.9e-09 64.3 76 44.7
Nn1g09270 Nelumbo nucifera HOM05D008628 ORTHO05D000653 1.0e-08 63.5 83 45.8
Aqoxy117s001 Aquilegia oxysepala HOM05D001004 ORTHO05D000653 1.7e-08 62.8 87 40.2
Aqoxy3G01749 Aquilegia oxysepala HOM05D001004 ORTHO05D000653 1.7e-08 62.8 87 40.2
CAN.G1513.6 Capsicum annuum HOM05D009680 ORTHO05D010443 3.8e-08 61.6 86 38.4
Peaxi162Scf00690g00221 Petunia axillaris HOM05D009680 ORTHO05D010443 6.5e-08 60.8 66 43.9
Dinv43524 Davidia involucrata HOM05D004910 ORTHO05D006864 8.5e-08 60.5 70 47.1
Oeu017850.1 Olea europaea HOM05D001004 ORTHO05D000653 1.9e-07 59.3 75 45.3
HPP92_016901 Vanilla planifolia HOM05D001004 ORTHO05D000653 2.5e-07 58.9 90 42.2
THA.LOC104805628 Tarenaya hassleriana HOM05D001004 ORTHO05D000653 1.2e-06 56.6 71 46.5
Oeu017841.1 Olea europaea HOM05D001004 ORTHO05D000653 1.6e-06 56.2 84 41.7
Duzib114G0002 Durio zibethinus HOM05D001004 ORTHO05D000653 2.1e-06 55.8 84 45.2
Migut.H02350 Erythranthe guttata HOM05D009680 ORTHO05D000653 2.1e-06 55.8 48 52.1
Eucgr.C02276 Eucalyptus grandis HOM05D001004 ORTHO05D000653 2.1e-06 55.8 65 47.7
Oeu017848.1 Olea europaea HOM05D001004 ORTHO05D000653 2.1e-06 55.8 78 43.6
COL.COLO4_35913 Corchorus olitorius HOM05D001004 ORTHO05D000653 2.7e-06 55.5 84 40.5
Oeu030752.1 Olea europaea HOM05D008628 ORTHO05D000653 2.7e-06 55.5 66 45.5
Oeu017833.1 Olea europaea HOM05D001004 ORTHO05D000653 3.6e-06 55.1 63 44.4
Migut.C00658 Erythranthe guttata HOM05D001004 ORTHO05D000653 4.6e-06 54.7 72 43.1
Migut.D01298 Erythranthe guttata HOM05D009680 ORTHO05D000653 6.1e-06 54.3 66 43.9
AL8G16730 Arabidopsis lyrata HOM05D001004 ORTHO05D000653 7.9e-06 53.9 70 45.7


User provided reference genes

Program Settings