Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10011025m.g Eutrema salsugineum HOM05D000003 ORTHO05D000283 7.5e-65 250.4 127 100.0
BcaC07g39463 Brassica carinata HOM05D000003 ORTHO05D000283 1.9e-12 76.3 53 64.2
C02p05510 Brassica napus HOM05D000003 ORTHO05D000283 4.3e-12 75.1 69 47.8
BolC2t06497H Brassica oleracea HOM05D000003 ORTHO05D000283 4.3e-12 75.1 69 47.8
BraA03t14881Z Brassica rapa HOM05D000003 ORTHO05D000283 5.7e-12 74.7 69 46.4
BolC6t37189H Brassica oleracea HOM05D000003 ORTHO05D000283 7.4e-12 74.3 57 56.1
BcaC08g44421 Brassica carinata HOM05D013042 ORTHO05D016769 9.7e-12 73.9 98 40.8
AT1G60720 Arabidopsis thaliana HOM05D000003 ORTHO05D000283 1.7e-11 73.2 69 52.2
BraA09t39919Z Brassica rapa HOM05D000003 ORTHO05D000283 1.1e-10 70.5 57 52.6
BraA10t42619Z Brassica rapa HOM05D000003 ORTHO05D000283 1.4e-10 70.1 53 56.6
Carub.0001s4272 Capsella rubella HOM05D000003 ORTHO05D000283 1.8e-10 69.7 71 46.5
BolC1t01479H Brassica oleracea HOM05D000003 ORTHO05D000283 2.4e-10 69.3 59 47.5
BolC9t55991H Brassica oleracea HOM05D000003 ORTHO05D000283 2.4e-10 69.3 56 51.8
BraA04t15908Z Brassica rapa HOM05D000003 ORTHO05D000283 3.1e-10 68.9 57 49.1
Carub.0003s1889 Capsella rubella HOM05D000003 ORTHO05D000283 3.1e-10 68.9 68 42.6
AT1G50080 Arabidopsis thaliana HOM05D000003 ORTHO05D000283 6.9e-10 67.8 49 61.2
BolC3t17965H Brassica oleracea HOM05D000003 ORTHO05D000283 9.1e-10 67.4 69 43.5
BolC8t49686H Brassica oleracea HOM05D000003 ORTHO05D000283 1.2e-09 67.0 68 44.1
BraA09t39368Z Brassica rapa HOM05D000003 ORTHO05D000283 1.2e-09 67.0 52 51.9
BolC3t21045H Brassica oleracea HOM05D000003 ORTHO05D000283 2.0e-09 66.2 53 50.9
BraA06t24482Z Brassica rapa HOM05D000003 ORTHO05D000283 2.0e-09 66.2 43 58.1
BraA01t03611Z Brassica rapa HOM05D000003 ORTHO05D000283 3.4e-09 65.5 57 47.4
BraA02t09340Z Brassica rapa HOM05D000003 ORTHO05D000283 3.4e-09 65.5 45 55.6
AT4G10613 Arabidopsis thaliana HOM05D000003 ORTHO05D000283 4.5e-09 65.1 68 47.1
C02p50310 Brassica napus HOM05D000003 ORTHO05D000283 4.5e-09 65.1 52 50.0
BolC2t11113H Brassica oleracea HOM05D000003 ORTHO05D000283 4.5e-09 65.1 52 50.0
BolC5t31110H Brassica oleracea HOM05D000003 ORTHO05D000283 5.9e-09 64.7 43 55.8
Carub.0005s0878 Capsella rubella HOM05D000003 ORTHO05D000283 5.9e-09 64.7 56 51.8
BraA01t03809Z Brassica rapa HOM05D000003 ORTHO05D000283 7.7e-09 64.3 44 56.8
BolC3t14559H Brassica oleracea HOM05D000003 ORTHO05D000283 1.0e-08 63.9 52 46.2
BolC5t32455H Brassica oleracea HOM05D000003 ORTHO05D000283 1.0e-08 63.9 57 50.9
C02p13220 Brassica napus HOM05D000003 ORTHO05D000283 1.3e-08 63.5 58 48.3
BolC2t07440H Brassica oleracea HOM05D000003 ORTHO05D000283 1.3e-08 63.5 57 49.1
Carub.0002s0384 Capsella rubella HOM05D000003 ORTHO05D000283 1.3e-08 63.5 105 33.3
AT2G19146 Arabidopsis thaliana HOM05D000003 ORTHO05D000283 2.2e-08 62.8 82 37.8
BraA05t21426Z Brassica rapa HOM05D000003 ORTHO05D000283 5.0e-08 61.6 54 50.0
A09p35340 Brassica napus HOM05D000003 ORTHO05D000283 6.5e-08 61.2 52 50.0
BraA08t32451Z Brassica rapa HOM05D000003 ORTHO05D000283 6.5e-08 61.2 57 49.1
BolC4t21678H Brassica oleracea HOM05D000003 ORTHO05D000283 8.5e-08 60.8 64 45.3
BolC4t22327H Brassica oleracea HOM05D000003 ORTHO05D000283 8.5e-08 60.8 57 47.4
BolC7t40780H Brassica oleracea HOM05D000003 ORTHO05D000283 1.4e-07 60.1 56 53.6
BcaC03g15259 Brassica carinata HOM05D000003 ORTHO05D000283 1.9e-07 59.7 68 39.7
BcaC08g44634 Brassica carinata HOM05D000003 ORTHO05D000004 1.9e-07 59.7 75 41.3
BolC1t04682H Brassica oleracea HOM05D000003 ORTHO05D000283 2.5e-07 59.3 53 47.2
BolC1t05746H Brassica oleracea HOM05D000003 ORTHO05D000283 2.5e-07 59.3 54 42.6
BolC3t18289H Brassica oleracea HOM05D043430 ORTHO05D040742 2.5e-07 59.3 71 39.4
BraA05t19597Z Brassica rapa HOM05D000003 ORTHO05D000283 2.5e-07 59.3 53 47.2
BraA01t02789Z Brassica rapa HOM05D000003 ORTHO05D000283 4.2e-07 58.5 69 39.1
Carub.0004s0983 Capsella rubella HOM05D000003 ORTHO05D000283 4.2e-07 58.5 70 40.0
AT1G33710 Arabidopsis thaliana HOM05D000003 ORTHO05D000283 5.5e-07 58.2 42 52.4
BolC1t01934H Brassica oleracea HOM05D000003 ORTHO05D000283 5.5e-07 58.2 53 41.5
BolC6t37916H Brassica oleracea HOM05D000003 ORTHO05D000283 5.5e-07 58.2 57 42.1
BcaC09g49710 Brassica carinata HOM05D000003 ORTHO05D000283 7.2e-07 57.8 74 41.9
C03p60270 Brassica napus HOM05D043430 ORTHO05D040742 7.2e-07 57.8 53 45.3
BraA03t10888Z Brassica rapa HOM05D000003 ORTHO05D000283 7.2e-07 57.8 53 52.8
BolC1t04577H Brassica oleracea HOM05D000003 ORTHO05D000283 9.4e-07 57.4 74 41.9
BcaB01g00659 Brassica carinata HOM05D000003 ORTHO05D000283 1.2e-06 57.0 51 47.1
BcaB03g14515 Brassica carinata HOM05D000003 ORTHO05D000283 1.2e-06 57.0 51 47.1
BolC5t30600H Brassica oleracea HOM05D000003 ORTHO05D000283 1.2e-06 57.0 58 44.8
BraA06t23300Z Brassica rapa HOM05D000003 ORTHO05D000283 1.2e-06 57.0 75 40.0
BraA07t28678Z Brassica rapa HOM05D000003 ORTHO05D000283 1.6e-06 56.6 80 36.2
A01p00650 Brassica napus HOM05D000003 ORTHO05D000283 2.1e-06 56.2 59 47.5
BolC8t47987H Brassica oleracea HOM05D000003 ORTHO05D000283 2.1e-06 56.2 54 42.6
BraA03t09438Z Brassica rapa HOM05D000003 ORTHO05D000283 2.1e-06 56.2 47 46.8
BcaC05g27538 Brassica carinata HOM05D000003 ORTHO05D000283 3.6e-06 55.5 49 46.9
BcaC07g40616 Brassica carinata HOM05D000003 ORTHO05D000283 3.6e-06 55.5 53 50.9
BcaB04g19379 Brassica carinata HOM05D000003 ORTHO05D000283 4.7e-06 55.1 62 40.3
BolC8t50980H Brassica oleracea HOM05D000003 ORTHO05D000283 4.7e-06 55.1 53 50.9
BolC1t04817H Brassica oleracea HOM05D000003 ORTHO05D000283 6.1e-06 54.7 68 36.8
BcaC09g48631 Brassica carinata HOM05D000003 ORTHO05D000283 7.9e-06 54.3 53 50.9
BcaC09g48764 Brassica carinata HOM05D000003 ORTHO05D000283 7.9e-06 54.3 57 42.1
BolC2t07393H Brassica oleracea HOM05D000003 ORTHO05D000283 7.9e-06 54.3 54 40.7
BraA08t33931Z Brassica rapa HOM05D000003 ORTHO05D000283 7.9e-06 54.3 53 52.8


User provided reference genes

Program Settings