Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10010877m.g Eutrema salsugineum HOM05D022319 ORTHO05D015333 6.1e-41 170.2 78 100.0
A01p25880 Brassica napus HOM05D022319 ORTHO05D033655 4.4e-15 84.3 90 50.0
AL5G22280 Arabidopsis lyrata HOM05D022319 ORTHO05D015333 7.5e-15 83.6 62 64.5
BolC1t03217H Brassica oleracea HOM05D022319 ORTHO05D033655 3.7e-14 81.3 90 48.9
C01p32790 Brassica napus HOM05D022319 ORTHO05D033655 9.2e-13 76.6 91 48.4
AL6G48590 Arabidopsis lyrata HOM05D014247 ORTHO05D016574 9.5e-10 66.6 73 45.2
AL8G24450 Arabidopsis lyrata HOM05D024853 ORTHO05D023673 3.6e-09 64.7 79 41.8
Carub.0008s1042 Capsella rubella HOM05D024853 ORTHO05D023673 3.1e-08 61.6 77 44.2
BolC3t13602H Brassica oleracea HOM05D014247 ORTHO05D016574 4.0e-08 61.2 78 42.3
CARHR290550 Cardamine hirsuta HOM05D025669 ORTHO05D015333 4.0e-08 61.2 71 39.4
A10p12810 Brassica napus HOM05D030919 ORTHO05D015333 5.2e-08 60.8 80 45.0
BraA10t43374Z Brassica rapa HOM05D030919 ORTHO05D015333 5.2e-08 60.8 80 45.0
C09p46370 Brassica napus HOM05D030919 ORTHO05D015333 6.8e-08 60.5 80 46.2
AT5G50345 Arabidopsis thaliana HOM05D024853 ORTHO05D023673 1.5e-07 59.3 79 41.8
BolC9t57500H Brassica oleracea HOM05D030919 ORTHO05D015333 2.0e-07 58.9 80 45.0
Thhalv10005199m.g Eutrema salsugineum HOM05D037493 ORTHO05D033804 3.4e-07 58.2 72 38.9
Carub.0001s1023 Capsella rubella HOM05D011357 ORTHO05D010512 1.3e-06 56.2 82 36.6
AL3G49090 Arabidopsis lyrata HOM05D014247 ORTHO05D016574 1.7e-06 55.8 75 41.3
AT2G16505 Arabidopsis thaliana HOM05D014247 ORTHO05D016574 1.7e-06 55.8 75 42.7


User provided reference genes

Program Settings