Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10010828m.g Eutrema salsugineum HOM05D000375 ORTHO05D000240 2.4e-49 198.7 119 100.0
Sp7g22110 Schrenkiella parvula HOM05D000375 ORTHO05D000240 2.7e-40 168.7 118 83.9
BcaNung06402 Brassica carinata HOM05D000375 ORTHO05D000240 8.2e-29 130.6 122 63.1
AT4G24150 Arabidopsis thaliana HOM05D000375 ORTHO05D000240 1.4e-28 129.8 113 61.9
A03p55070 Brassica napus HOM05D000375 ORTHO05D000240 1.5e-27 126.3 119 60.5
BraA03t14567Z Brassica rapa HOM05D000375 ORTHO05D000240 1.5e-27 126.3 119 60.5
BcaNung01120 Brassica carinata HOM05D000375 ORTHO05D000240 5.8e-27 124.4 124 60.5
Carub.0007s1695 Capsella rubella HOM05D000375 ORTHO05D000240 5.0e-26 121.3 118 57.6
CARHR231550 Cardamine hirsuta HOM05D000375 ORTHO05D000240 5.5e-25 117.9 120 57.5
AL7G29140 Arabidopsis lyrata HOM05D000375 ORTHO05D000240 2.1e-24 115.9 119 68.9
BraA01t01486Z Brassica rapa HOM05D000375 ORTHO05D000240 6.1e-24 114.4 122 56.6
A01p15470 Brassica napus HOM05D000375 ORTHO05D000240 1.3e-23 113.2 122 55.7
C07p53390 Brassica napus HOM05D000375 ORTHO05D000240 3.3e-22 108.6 84 69.0
BolC7t45833H Brassica oleracea HOM05D000375 ORTHO05D000240 3.3e-22 108.6 84 69.0
BcaC09g50904 Brassica carinata HOM05D000375 ORTHO05D000240 4.6e-16 88.2 120 50.8
C01p19370 Brassica napus HOM05D000375 ORTHO05D000240 4.6e-16 88.2 120 50.8
BolC1t01865H Brassica oleracea HOM05D000375 ORTHO05D000240 4.6e-16 88.2 120 50.8
Aa31LG6G7410 Aethionema arabicum HOM05D000375 ORTHO05D000240 7.4e-14 80.9 128 46.9
Thhalv10025371m.g Eutrema salsugineum HOM05D000375 ORTHO05D000240 2.2e-13 79.3 92 69.6


User provided reference genes

Program Settings